RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 FHAD1B1AJZ9 1412 aa6.23□□□□□ -1.41
ATP13A3-206ENST00000461660 WDR62O43379 1518 aa6.21□□□□□ -1.42
ATP13A3-206ENST00000461660 CUL7Q14999 1698 aa6.2□□□□□ -1.42
ATP13A3-206ENST00000461660 CCER1Q8TC90 406 aaPredicted RBP6.2□□□□□ -1.42
ATP13A3-206ENST00000461660 ZNF608Q9ULD9 1512 aaPredicted RBP6.19□□□□□ -1.42
ATP13A3-206ENST00000461660 FHOD3Q2V2M9 1422 aa6.18□□□□□ -1.42
ATP13A3-206ENST00000461660 SNAPC4Q5SXM2 1469 aa6.18□□□□□ -1.42
ATP13A3-206ENST00000461660 ARID3CA6NKF2 412 aa6.18□□□□□ -1.42
ATP13A3-206ENST00000461660 ZEB1P37275 1124 aaPredicted RBP6.18□□□□□ -1.42
ATP13A3-206ENST00000461660 ITGAEP38570 1179 aa6.18□□□□□ -1.42
ATP13A3-206ENST00000461660 FMN1Q68DA7 1419 aa6.18□□□□□ -1.42
ATP13A3-206ENST00000461660 CDK11AQ9UQ88 783 aaPredicted RBP6.17□□□□□ -1.42
ATP13A3-206ENST00000461660 ARHGAP35Q9NRY4 1499 aa6.17□□□□□ -1.42
ATP13A3-206ENST00000461660 MTUS2Q5JR59 1369 aa6.17□□□□□ -1.42
ATP13A3-206ENST00000461660 ARAP1Q96P48 1450 aa6.17□□□□□ -1.42
ATP13A3-206ENST00000461660 FAM50AQ14320 339 aaKnown RBP6.16□□□□□ -1.42
ATP13A3-206ENST00000461660 ABCA5Q8WWZ7 1642 aa6.16□□□□□ -1.42
ATP13A3-206ENST00000461660 HRCP23327 699 aa6.16□□□□□ -1.42
ATP13A3-206ENST00000461660 MAGI1Q96QZ7 1491 aaPredicted RBP6.16□□□□□ -1.42
ATP13A3-206ENST00000461660 CARMIL2Q6F5E8 1435 aa6.16□□□□□ -1.42
ATP13A3-206ENST00000461660 TARBP1Q13395 1621 aaKnown RBP6.16□□□□□ -1.42
ATP13A3-206ENST00000461660 EFCAB5A4FU69 1503 aa6.15□□□□□ -1.42
ATP13A3-206ENST00000461660 JPH4Q96JJ6 628 aa6.14□□□□□ -1.43
ATP13A3-206ENST00000461660 SYNJ2O15056 1496 aa6.14□□□□□ -1.43
ATP13A3-206ENST00000461660 THOC2Q8NI27 1593 aaKnown RBP6.14□□□□□ -1.43
ATP13A3-206ENST00000461660 GRIN2AQ12879 1464 aa6.13□□□□□ -1.43
ATP13A3-206ENST00000461660 KANK4Q5T7N3 995 aaPredicted RBP6.13□□□□□ -1.43
ATP13A3-206ENST00000461660 WDR97A6NE52 1622 aa6.13□□□□□ -1.43
ATP13A3-206ENST00000461660 EIF4G3O43432 1585 aaKnown RBP6.13□□□□□ -1.43
ATP13A3-206ENST00000461660 ADAMTS12P58397 1594 aa6.13□□□□□ -1.43
ATP13A3-206ENST00000461660 KIAA0586Q9BVV6 1533 aa6.13□□□□□ -1.43
ATP13A3-206ENST00000461660 IQGAP2Q13576 1575 aa6.12□□□□□ -1.43
ATP13A3-206ENST00000461660 CASKIN1Q8WXD9 1431 aa6.11□□□□□ -1.43
ATP13A3-206ENST00000461660 PBRM1Q86U86 1689 aa6.1□□□□□ -1.43
ATP13A3-206ENST00000461660 FYCO1Q9BQS8 1478 aa6.1□□□□□ -1.43
ATP13A3-206ENST00000461660 CCNB3Q8WWL7 1395 aa6.09□□□□□ -1.43
ATP13A3-206ENST00000461660 PLEKHD1A6NEE1 506 aa6.09□□□□□ -1.43
ATP13A3-206ENST00000461660 CTTNBP2Q8WZ74 1663 aa6.08□□□□□ -1.44
ATP13A3-206ENST00000461660 PTPRGP23470 1445 aa6.07□□□□□ -1.44
ATP13A3-206ENST00000461660 LRRC9Q6ZRR7 1453 aa6.07□□□□□ -1.44
ATP13A3-206ENST00000461660 PRG4Q92954 1404 aaPredicted RBP6.06□□□□□ -1.44
ATP13A3-206ENST00000461660 CCDC18Q5T9S5 1454 aa6.06□□□□□ -1.44
ATP13A3-206ENST00000461660 ZNF777Q9ULD5 760 aaPredicted RBP6.06□□□□□ -1.44
ATP13A3-206ENST00000461660 PCF11O94913 1555 aaKnown RBP6.06□□□□□ -1.44
ATP13A3-206ENST00000461660 NPM1P06748 294 aaKnown RBP eCLIP6.06□□□□□ -1.44
ATP13A3-206ENST00000461660 TIAM1Q13009 1591 aa6.06□□□□□ -1.44
ATP13A3-206ENST00000461660 NUP160Q12769 1436 aa6.06□□□□□ -1.44
ATP13A3-206ENST00000461660 OSCARQ8IYS5 282 aa6.05□□□□□ -1.44
ATP13A3-206ENST00000461660 FOXD1Q16676 465 aa6.05□□□□□ -1.44
ATP13A3-206ENST00000461660 UGGT2Q9NYU1 1516 aa6.05□□□□□ -1.44
ATP13A3-206ENST00000461660 MAP3K1Q13233 1512 aa6.05□□□□□ -1.44
ATP13A3-206ENST00000461660 CFDP1Q9UEE9 299 aaPredicted RBP6.04□□□□□ -1.44
ATP13A3-206ENST00000461660 HECW1Q76N89 1606 aa6.04□□□□□ -1.44
ATP13A3-206ENST00000461660 SAMD9Q5K651 1589 aa6.02□□□□□ -1.45
ATP13A3-206ENST00000461660 KCNH8Q96L42 1107 aa6.02□□□□□ -1.45
ATP13A3-206ENST00000461660 PHLDB1Q86UU1 1377 aa6.02□□□□□ -1.45
ATP13A3-206ENST00000461660 TRIM52Q96A61 297 aa6.02□□□□□ -1.45
ATP13A3-206ENST00000461660 CHIC2Q9UKJ5 165 aa6.02□□□□□ -1.45
ATP13A3-206ENST00000461660 MYT1LQ9UL68 1186 aa6.02□□□□□ -1.45
ATP13A3-206ENST00000461660 EPRSP07814 1512 aaKnown RBP6.01□□□□□ -1.45
ATP13A3-206ENST00000461660 CEP170Q5SW79 1584 aa6.01□□□□□ -1.45
ATP13A3-206ENST00000461660 KIAA0556O60303 1618 aa6.01□□□□□ -1.45
ATP13A3-206ENST00000461660 EHBP1L1Q8N3D4 1523 aa6.01□□□□□ -1.45
ATP13A3-206ENST00000461660 RRBP1Q9P2E9 1410 aaKnown RBP6.01□□□□□ -1.45
ATP13A3-206ENST00000461660 NCOA2Q15596 1464 aa6.01□□□□□ -1.45
ATP13A3-206ENST00000461660 PLB1Q6P1J6 1458 aa6.01□□□□□ -1.45
ATP13A3-206ENST00000461660 DISP1Q96F81 1524 aa6.01□□□□□ -1.45
ATP13A3-206ENST00000461660 FGD6Q6ZV73 1430 aa6□□□□□ -1.45
ATP13A3-206ENST00000461660 MYOM3Q5VTT5 1437 aa6□□□□□ -1.45
ATP13A3-206ENST00000461660 CDK13Q14004 1512 aaKnown RBP6□□□□□ -1.45
ATP13A3-206ENST00000461660 TSPY4P0CV99 314 aa6□□□□□ -1.45
ATP13A3-206ENST00000461660 TSPY10P0CW01 314 aa6□□□□□ -1.45
ATP13A3-206ENST00000461660 TROQ12816 1431 aaPredicted RBP5.99□□□□□ -1.45
ATP13A3-206ENST00000461660 RRP7BPQ9NSQ0 103 aa5.99□□□□□ -1.45
ATP13A3-206ENST00000461660 UACAQ9BZF9 1416 aa5.99□□□□□ -1.45
ATP13A3-206ENST00000461660 SETD5Q9C0A6 1442 aa5.98□□□□□ -1.45
ATP13A3-206ENST00000461660 NUP153P49790 1475 aaKnown RBP5.97□□□□□ -1.45
ATP13A3-206ENST00000461660 CFAP43Q8NDM7 1665 aa5.97□□□□□ -1.45
ATP13A3-206ENST00000461660 RAPGEF6Q8TEU7 1601 aa5.97□□□□□ -1.45
ATP13A3-206ENST00000461660 NEUROD1Q13562 356 aa5.96□□□□□ -1.45
ATP13A3-206ENST00000461660 SUPT6HQ7KZ85 1726 aaKnown RBP5.96□□□□□ -1.45
ATP13A3-206ENST00000461660 RAB3GAP2Q9H2M9 1393 aa5.96□□□□□ -1.45
ATP13A3-206ENST00000461660 CLSPNQ9HAW4 1339 aa5.96□□□□□ -1.46
ATP13A3-206ENST00000461660 ACIN1Q9UKV3 1341 aaKnown RBP5.96□□□□□ -1.46
ATP13A3-206ENST00000461660 MIA2Q96PC5 1412 aa5.95□□□□□ -1.46
ATP13A3-206ENST00000461660 CHD1O14646 1710 aa5.95□□□□□ -1.46
ATP13A3-206ENST00000461660 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.95□□□□□ -1.46
ATP13A3-206ENST00000461660 EFCAB2Q5VUJ9 269 aa5.95□□□□□ -1.46
ATP13A3-206ENST00000461660 ATP10BO94823 1461 aa5.94□□□□□ -1.46
ATP13A3-206ENST00000461660 ZNF644Q9H582 1327 aaPredicted RBP5.93□□□□□ -1.46
ATP13A3-206ENST00000461660 CYB5RLQ6IPT4 315 aa5.93□□□□□ -1.46
ATP13A3-206ENST00000461660 RSPH4AQ5TD94 716 aa5.92□□□□□ -1.46
ATP13A3-206ENST00000461660 ANKRD30AQ9BXX3 1397 aa5.92□□□□□ -1.46
ATP13A3-206ENST00000461660 SLC4A1APQ9BWU0 796 aaKnown RBP5.92□□□□□ -1.46
ATP13A3-206ENST00000461660 KIF14Q15058 1648 aa5.91□□□□□ -1.46
ATP13A3-206ENST00000461660 HNRNPMP52272 730 aaKnown RBP eCLIP5.91□□□□□ -1.46
ATP13A3-206ENST00000461660 DHX57Q6P158 1386 aaKnown RBP5.91□□□□□ -1.46
ATP13A3-206ENST00000461660 TONSLQ96HA7 1378 aa5.91□□□□□ -1.46
ATP13A3-206ENST00000461660 ABCC2Q92887 1545 aa5.91□□□□□ -1.46
ATP13A3-206ENST00000461660 ABCA8O94911 1581 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms