RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 WDR62O43379 1518 aa30.71■■■□□ 2.51
CCM2-203ENST00000461377 FHAD1B1AJZ9 1412 aa30.69■■■□□ 2.5
CCM2-203ENST00000461377 PBRM1Q86U86 1689 aa30.64■■■□□ 2.5
CCM2-203ENST00000461377 TIAM1Q13009 1591 aa30.64■■■□□ 2.5
CCM2-203ENST00000461377 IFT140Q96RY7 1462 aa30.61■■■□□ 2.49
CCM2-203ENST00000461377 HNRNPUL2Q1KMD3 747 aaKnown RBP30.61■■■□□ 2.49
CCM2-203ENST00000461377 FHOD3Q2V2M9 1422 aa30.6■■■□□ 2.49
CCM2-203ENST00000461377 PCF11O94913 1555 aaKnown RBP30.59■■■□□ 2.49
CCM2-203ENST00000461377 AQRO60306 1485 aaKnown RBP eCLIP30.58■■■□□ 2.497e-7■■■■■ 33.7
CCM2-203ENST00000461377 RRBP1Q9P2E9 1410 aaKnown RBP30.58■■■□□ 2.49
CCM2-203ENST00000461377 P3H3Q8IVL6 736 aa30.56■■■□□ 2.48
CCM2-203ENST00000461377 ADAMTS12P58397 1594 aa30.54■■■□□ 2.48
CCM2-203ENST00000461377 SAMD9Q5K651 1589 aa30.54■■■□□ 2.48
CCM2-203ENST00000461377 GRIN2BQ13224 1484 aa30.54■■■□□ 2.48
CCM2-203ENST00000461377 CFAP43Q8NDM7 1665 aa30.52■■■□□ 2.48
CCM2-203ENST00000461377 FYCO1Q9BQS8 1478 aa30.52■■■□□ 2.48
CCM2-203ENST00000461377 ERCC6Q03468 1493 aa30.51■■■□□ 2.48
CCM2-203ENST00000461377 CASKIN1Q8WXD9 1431 aa30.5■■■□□ 2.47
CCM2-203ENST00000461377 LRRC9Q6ZRR7 1453 aa30.5■■■□□ 2.47
CCM2-203ENST00000461377 ZNF608Q9ULD9 1512 aaPredicted RBP30.47■■■□□ 2.47
CCM2-203ENST00000461377 FMN1Q68DA7 1419 aa30.47■■■□□ 2.47
CCM2-203ENST00000461377 THOC2Q8NI27 1593 aaKnown RBP30.47■■■□□ 2.47
CCM2-203ENST00000461377 CCNB3Q8WWL7 1395 aa30.42■■■□□ 2.46
CCM2-203ENST00000461377 SNAPC4Q5SXM2 1469 aa30.4■■■□□ 2.46
CCM2-203ENST00000461377 EIF4G3O43432 1585 aaKnown RBP30.35■■■□□ 2.45
CCM2-203ENST00000461377 IQGAP2Q13576 1575 aa30.34■■■□□ 2.45
CCM2-203ENST00000461377 ATP1B4Q9UN42 357 aaPredicted RBP30.3■■■□□ 2.44
CCM2-203ENST00000461377 PHLDB1Q86UU1 1377 aa30.28■■■□□ 2.44
CCM2-203ENST00000461377 UGGT2Q9NYU1 1516 aa30.21■■■□□ 2.43
CCM2-203ENST00000461377 GRIN2AQ12879 1464 aa30.19■■■□□ 2.42
CCM2-203ENST00000461377 MAGI1Q96QZ7 1491 aaPredicted RBP30.19■■■□□ 2.42
CCM2-203ENST00000461377 LRRIQ1Q96JM4 1722 aa30.19■■■□□ 2.42
CCM2-203ENST00000461377 KIAA0586Q9BVV6 1533 aa30.17■■■□□ 2.42
CCM2-203ENST00000461377 DHX57Q6P158 1386 aaKnown RBP30.12■■■□□ 2.41
CCM2-203ENST00000461377 CLSPNQ9HAW4 1339 aa30.1■■■□□ 2.41
CCM2-203ENST00000461377 SYNJ2O15056 1496 aa30.09■■■□□ 2.41
CCM2-203ENST00000461377 MTUS2Q5JR59 1369 aa30.09■■■□□ 2.41
CCM2-203ENST00000461377 CCDC18Q5T9S5 1454 aa30.08■■■□□ 2.41
CCM2-203ENST00000461377 HECW1Q76N89 1606 aa30.08■■■□□ 2.41
CCM2-203ENST00000461377 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.07■■■□□ 2.44e-9■■■□□ 16.7
CCM2-203ENST00000461377 ITGAEP38570 1179 aa30.06■■■□□ 2.4
CCM2-203ENST00000461377 EHBP1L1Q8N3D4 1523 aa30.05■■■□□ 2.4
CCM2-203ENST00000461377 KIAA0556O60303 1618 aa30.03■■■□□ 2.4
CCM2-203ENST00000461377 DISP1Q96F81 1524 aa30.03■■■□□ 2.4
CCM2-203ENST00000461377 FAM50AQ14320 339 aaKnown RBP30.01■■■□□ 2.4
CCM2-203ENST00000461377 FGD6Q6ZV73 1430 aa30■■■□□ 2.39
CCM2-203ENST00000461377 CEP170Q5SW79 1584 aa29.99■■■□□ 2.39
CCM2-203ENST00000461377 NCOA2Q15596 1464 aa29.98■■■□□ 2.39
CCM2-203ENST00000461377 CHMP7Q8WUX9 453 aaPredicted RBP29.98■■■□□ 2.39
CCM2-203ENST00000461377 SUPT6HQ7KZ85 1726 aaKnown RBP29.98■■■□□ 2.39
CCM2-203ENST00000461377 EPRSP07814 1512 aaKnown RBP29.97■■■□□ 2.39
CCM2-203ENST00000461377 MAGI3Q5TCQ9 1506 aa29.96■■■□□ 2.39
CCM2-203ENST00000461377 RAB3GAP2Q9H2M9 1393 aa29.96■■■□□ 2.39
CCM2-203ENST00000461377 SETD5Q9C0A6 1442 aa29.95■■■□□ 2.38
CCM2-203ENST00000461377 ARHGEF11O15085 1522 aa29.94■■■□□ 2.38
CCM2-203ENST00000461377 NUP160Q12769 1436 aa29.94■■■□□ 2.38
CCM2-203ENST00000461377 MYOM3Q5VTT5 1437 aa29.91■■■□□ 2.38
CCM2-203ENST00000461377 CDK13Q14004 1512 aaKnown RBP29.87■■■□□ 2.37
CCM2-203ENST00000461377 FBLN2P98095 1184 aa29.83■■■□□ 2.37
CCM2-203ENST00000461377 RAPGEF6Q8TEU7 1601 aa29.81■■■□□ 2.36
CCM2-203ENST00000461377 ZNF316A6NFI3 1004 aaPredicted RBP29.8■■■□□ 2.36
CCM2-203ENST00000461377 NUP153P49790 1475 aaKnown RBP29.79■■■□□ 2.36
CCM2-203ENST00000461377 PTPN23Q9H3S7 1636 aa29.77■■■□□ 2.36
CCM2-203ENST00000461377 MAPKBP1O60336 1514 aa29.76■■■□□ 2.35
CCM2-203ENST00000461377 TCOF1Q13428 1488 aaKnown RBP29.74■■■□□ 2.35
CCM2-203ENST00000461377 CARMIL2Q6F5E8 1435 aa29.74■■■□□ 2.35
CCM2-203ENST00000461377 PTPRKQ15262 1439 aa29.73■■■□□ 2.35
CCM2-203ENST00000461377 JPH4Q96JJ6 628 aa29.73■■■□□ 2.35
CCM2-203ENST00000461377 DIEXFQ68CQ4 756 aaKnown RBP29.7■■■□□ 2.35
CCM2-203ENST00000461377 MIA2Q96PC5 1412 aa29.68■■■□□ 2.34
CCM2-203ENST00000461377 HFM1A2PYH4 1435 aa29.68■■■□□ 2.34
CCM2-203ENST00000461377 ARID3CA6NKF2 412 aa29.68■■■□□ 2.34
CCM2-203ENST00000461377 PLB1Q6P1J6 1458 aa29.64■■■□□ 2.34
CCM2-203ENST00000461377 CDK11AQ9UQ88 783 aaPredicted RBP29.6■■■□□ 2.33
CCM2-203ENST00000461377 NAIPQ13075 1403 aa29.58■■■□□ 2.33
CCM2-203ENST00000461377 ABCA8O94911 1581 aa29.55■■■□□ 2.32
CCM2-203ENST00000461377 TROQ12816 1431 aaPredicted RBP29.55■■■□□ 2.32
CCM2-203ENST00000461377 CHD1O14646 1710 aa29.55■■■□□ 2.32
CCM2-203ENST00000461377 AKNAQ7Z591 1439 aa29.51■■■□□ 2.31
CCM2-203ENST00000461377 PRG4Q92954 1404 aaPredicted RBP29.5■■■□□ 2.31
CCM2-203ENST00000461377 UACAQ9BZF9 1416 aa29.49■■■□□ 2.31
CCM2-203ENST00000461377 ADCY10Q96PN6 1610 aa29.48■■■□□ 2.31
CCM2-203ENST00000461377 GCC2Q8IWJ2 1684 aa29.47■■■□□ 2.31
CCM2-203ENST00000461377 SHROOM2Q13796 1616 aa29.42■■■□□ 2.3
CCM2-203ENST00000461377 ATP10BO94823 1461 aa29.4■■■□□ 2.3
CCM2-203ENST00000461377 DNMT1P26358 1616 aaKnown RBP29.39■■■□□ 2.3
CCM2-203ENST00000461377 KIF14Q15058 1648 aa29.39■■■□□ 2.3
CCM2-203ENST00000461377 SIN3AQ96ST3 1273 aa29.39■■■□□ 2.3
CCM2-203ENST00000461377 DAPK1P53355 1430 aa29.39■■■□□ 2.3
CCM2-203ENST00000461377 TIMELESSQ9UNS1 1208 aa29.39■■■□□ 2.29
CCM2-203ENST00000461377 ITSN2Q9NZM3 1697 aa29.39■■■□□ 2.29
CCM2-203ENST00000461377 PTPRGP23470 1445 aa29.38■■■□□ 2.29
CCM2-203ENST00000461377 RRP7BPQ9NSQ0 103 aa29.37■■■□□ 2.29
CCM2-203ENST00000461377 CHIC2Q9UKJ5 165 aa29.37■■■□□ 2.29
CCM2-203ENST00000461377 GPATCH8Q9UKJ3 1502 aaKnown RBP29.36■■■□□ 2.29
CCM2-203ENST00000461377 ABCC5O15440 1437 aa29.35■■■□□ 2.29
CCM2-203ENST00000461377 ROCK1Q13464 1354 aa29.34■■■□□ 2.29
CCM2-203ENST00000461377 NEUROD1Q13562 356 aa29.32■■■□□ 2.28
CCM2-203ENST00000461377 ZNF644Q9H582 1327 aaPredicted RBP29.32■■■□□ 2.28
CCM2-203ENST00000461377 CAMSAP2Q08AD1 1489 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms