RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 NISCHQ9Y2I1 1504 aa44.34■■■■■ 4.69
CCM2-203ENST00000461377 CCDC180Q9P1Z9 1646 aa38.28■■■■□ 3.72
CCM2-203ENST00000461377 ZCCHC6Q5VYS8 1495 aaKnown RBP37.39■■■■□ 3.58
CCM2-203ENST00000461377 SHROOM4Q9ULL8 1493 aa36.71■■■■□ 3.47
CCM2-203ENST00000461377 DCAF1Q9Y4B6 1507 aa36.63■■■■□ 3.45
CCM2-203ENST00000461377 DCAF8L2P0C7V8 631 aa36.43■■■■□ 3.42
CCM2-203ENST00000461377 MYO15BQ96JP2 1530 aa35.93■■■■□ 3.34
CCM2-203ENST00000461377 ABCC9O60706 1549 aa35.71■■■■□ 3.31
CCM2-203ENST00000461377 SUPT5HO00267 1087 aaKnown RBP35.62■■■■□ 3.29
CCM2-203ENST00000461377 NACADO15069 1562 aa35.52■■■■□ 3.28
CCM2-203ENST00000461377 SCRIBQ14160 1630 aa35.39■■■■□ 3.26
CCM2-203ENST00000461377 RB1CC1Q8TDY2 1594 aa35.06■■■■□ 3.2
CCM2-203ENST00000461377 RSF1Q96T23 1441 aaPredicted RBP34.69■■■■□ 3.14
CCM2-203ENST00000461377 CHIC1Q5VXU3 224 aa34.45■■■■□ 3.11
CCM2-203ENST00000461377 CECR2Q9BXF3 1484 aa34.45■■■■□ 3.11
CCM2-203ENST00000461377 UNC13AQ9UPW8 1703 aa34.4■■■■□ 3.1
CCM2-203ENST00000461377 MROH2BQ7Z745 1585 aa34.32■■■■□ 3.08
CCM2-203ENST00000461377 BAZ1AQ9NRL2 1556 aaPredicted RBP34.16■■■■□ 3.06
CCM2-203ENST00000461377 BICRAQ9NZM4 1560 aa34.06■■■■□ 3.04
CCM2-203ENST00000461377 WIZO95785 1651 aa34.06■■■■□ 3.04
CCM2-203ENST00000461377 SMARCA4P51532 1647 aa33.94■■■■□ 3.02
CCM2-203ENST00000461377 PABPN1Q86U42 306 aaKnown RBP eCLIP33.85■■■■□ 3.01
CCM2-203ENST00000461377 TOP2AP11388 1531 aaKnown RBP33.7■■■□□ 2.98
CCM2-203ENST00000461377 PEG3Q9GZU2 1588 aa33.48■■■□□ 2.95
CCM2-203ENST00000461377 EIF4G1Q04637 1599 aaKnown RBP33.44■■■□□ 2.94
CCM2-203ENST00000461377 SMARCA2P51531 1590 aa33.42■■■□□ 2.94
CCM2-203ENST00000461377 TRIM41Q8WV44 630 aa33.41■■■□□ 2.94
CCM2-203ENST00000461377 CCDC88BA6NC98 1476 aa33.39■■■□□ 2.94
CCM2-203ENST00000461377 ATAD2BQ9ULI0 1458 aa33.24■■■□□ 2.91
CCM2-203ENST00000461377 LOC105371045A0A1W2PR82 267 aa33.18■■■□□ 2.9
CCM2-203ENST00000461377 BAZ1BQ9UIG0 1483 aaKnown RBP33.07■■■□□ 2.88
CCM2-203ENST00000461377 ABCC8Q09428 1581 aa32.92■■■□□ 2.86
CCM2-203ENST00000461377 FAM9AQ8IZU1 332 aaPredicted RBP32.87■■■□□ 2.85
CCM2-203ENST00000461377 NCAPD3P42695 1498 aa32.82■■■□□ 2.84
CCM2-203ENST00000461377 HMGXB3Q12766 1538 aa32.82■■■□□ 2.84
CCM2-203ENST00000461377 WRNQ14191 1432 aaPredicted RBP eCLIP32.61■■■□□ 2.81
CCM2-203ENST00000461377 SYNJ1O43426 1573 aa32.46■■■□□ 2.79
CCM2-203ENST00000461377 SOGA1O94964 1423 aa32.46■■■□□ 2.79
CCM2-203ENST00000461377 EEA1Q15075 1411 aa32.45■■■□□ 2.79
CCM2-203ENST00000461377 EHMT2Q96KQ7 1210 aa32.41■■■□□ 2.78
CCM2-203ENST00000461377 PCGF6Q9BYE7 350 aa32.34■■■□□ 2.77
CCM2-203ENST00000461377 CC2D2AQ9P2K1 1620 aa32.31■■■□□ 2.76
CCM2-203ENST00000461377 RUSC2Q8N2Y8 1516 aa32.3■■■□□ 2.76
CCM2-203ENST00000461377 CFTRP13569 1480 aa32.28■■■□□ 2.76
CCM2-203ENST00000461377 CSRNP3Q8WYN3 585 aa32.25■■■□□ 2.75
CCM2-203ENST00000461377 TOP2BQ02880 1626 aa32.25■■■□□ 2.75
CCM2-203ENST00000461377 BIVM-ERCC5R4GMW8 1640 aa32.19■■■□□ 2.74
CCM2-203ENST00000461377 TRIM26Q12899 539 aaPredicted RBP32.14■■■□□ 2.74
CCM2-203ENST00000461377 TNIKQ9UKE5 1360 aa32.1■■■□□ 2.73
CCM2-203ENST00000461377 PRDM2Q13029 1718 aa32.08■■■□□ 2.73
CCM2-203ENST00000461377 GOLGA3Q08378 1498 aa32.06■■■□□ 2.72
CCM2-203ENST00000461377 CUX1P39880 1505 aa32.04■■■□□ 2.72
CCM2-203ENST00000461377 CADPSQ9ULU8 1353 aa32.03■■■□□ 2.72
CCM2-203ENST00000461377 KIF21BO75037 1637 aa32.01■■■□□ 2.72
CCM2-203ENST00000461377 CEP164Q9UPV0 1460 aa31.99■■■□□ 2.71
CCM2-203ENST00000461377 CEP162Q5TB80 1403 aa31.99■■■□□ 2.71
CCM2-203ENST00000461377 HRCP23327 699 aa31.96■■■□□ 2.71
CCM2-203ENST00000461377 UBTFP17480 764 aaKnown RBP31.89■■■□□ 2.7
CCM2-203ENST00000461377 RAPGEF2Q9Y4G8 1499 aa31.75■■■□□ 2.67
CCM2-203ENST00000461377 KIF27Q86VH2 1401 aa31.71■■■□□ 2.67
CCM2-203ENST00000461377 FANCD2Q9BXW9 1451 aa31.69■■■□□ 2.66
CCM2-203ENST00000461377 PRXQ9BXM0 1461 aa31.69■■■□□ 2.66
CCM2-203ENST00000461377 ERICH3Q5RHP9 1530 aa31.67■■■□□ 2.66
CCM2-203ENST00000461377 NESP48681 1621 aa31.59■■■□□ 2.65
CCM2-203ENST00000461377 CLIP1P30622 1438 aa31.58■■■□□ 2.65
CCM2-203ENST00000461377 PPARGC1BQ86YN6 1023 aaKnown RBP31.58■■■□□ 2.65
CCM2-203ENST00000461377 FGD5Q6ZNL6 1462 aa31.57■■■□□ 2.64
CCM2-203ENST00000461377 LAMC3Q9Y6N6 1575 aa31.57■■■□□ 2.64
CCM2-203ENST00000461377 DNMBPQ6XZF7 1577 aa31.51■■■□□ 2.63
CCM2-203ENST00000461377 CUX2O14529 1486 aa31.5■■■□□ 2.63
CCM2-203ENST00000461377 TOPBP1Q92547 1522 aa31.42■■■□□ 2.62
CCM2-203ENST00000461377 VPS8Q8N3P4 1428 aa31.4■■■□□ 2.62
CCM2-203ENST00000461377 DNAJC5BQ9UF47 199 aa31.39■■■□□ 2.62
CCM2-203ENST00000461377 IGF1RP08069 1367 aa31.39■■■□□ 2.61
CCM2-203ENST00000461377 POLA1P09884 1462 aaPredicted RBP31.33■■■□□ 2.61
CCM2-203ENST00000461377 PDS5BQ9NTI5 1447 aa31.31■■■□□ 2.6
CCM2-203ENST00000461377 ABCA10Q8WWZ4 1543 aa31.29■■■□□ 2.6
CCM2-203ENST00000461377 URB2Q14146 1524 aaKnown RBP31.28■■■□□ 2.6
CCM2-203ENST00000461377 RAD54L2Q9Y4B4 1467 aa31.26■■■□□ 2.59
CCM2-203ENST00000461377 CARMIL1Q5VZK9 1371 aa31.23■■■□□ 2.59
CCM2-203ENST00000461377 ARAP1Q96P48 1450 aa31.22■■■□□ 2.59
CCM2-203ENST00000461377 RANGAP1P46060 587 aaPredicted RBP31.21■■■□□ 2.59
CCM2-203ENST00000461377 TTBK1Q5TCY1 1321 aaPredicted RBP31.19■■■□□ 2.58
CCM2-203ENST00000461377 ZEB1P37275 1124 aaPredicted RBP31.17■■■□□ 2.58
CCM2-203ENST00000461377 KIF21AQ7Z4S6 1674 aa31.15■■■□□ 2.58
CCM2-203ENST00000461377 WDR97A6NE52 1622 aa31.13■■■□□ 2.57
CCM2-203ENST00000461377 ARHGAP35Q9NRY4 1499 aa31.08■■■□□ 2.57
CCM2-203ENST00000461377 APLP2Q06481 763 aa31.05■■■□□ 2.56
CCM2-203ENST00000461377 CUL7Q14999 1698 aa31.03■■■□□ 2.56
CCM2-203ENST00000461377 ABCA5Q8WWZ7 1642 aa30.98■■■□□ 2.55
CCM2-203ENST00000461377 TARBP1Q13395 1621 aaKnown RBP30.89■■■□□ 2.54
CCM2-203ENST00000461377 MRC2Q9UBG0 1479 aa30.89■■■□□ 2.54
CCM2-203ENST00000461377 TDRD9Q8NDG6 1382 aaKnown RBP30.89■■■□□ 2.54
CCM2-203ENST00000461377 GAPVD1Q14C86 1478 aa30.89■■■□□ 2.54
CCM2-203ENST00000461377 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.83■■■□□ 2.53
CCM2-203ENST00000461377 CTTNBP2Q8WZ74 1663 aa30.78■■■□□ 2.52
CCM2-203ENST00000461377 CCER1Q8TC90 406 aaPredicted RBP30.76■■■□□ 2.51
CCM2-203ENST00000461377 KANK4Q5T7N3 995 aaPredicted RBP30.75■■■□□ 2.51
CCM2-203ENST00000461377 EFCAB5A4FU69 1503 aa30.73■■■□□ 2.51
CCM2-203ENST00000461377 MAP3K1Q13233 1512 aa30.71■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms