RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 PBRM1Q86U86 1689 aa17.13■□□□□ 0.33
COPS7B-217ENST00000461350 ARHGAP35Q9NRY4 1499 aa17.12■□□□□ 0.33
COPS7B-217ENST00000461350 P3H3Q8IVL6 736 aa17.09■□□□□ 0.33
COPS7B-217ENST00000461350 GRIN2BQ13224 1484 aa17.08■□□□□ 0.32
COPS7B-217ENST00000461350 EIF4G3O43432 1585 aaKnown RBP17.06■□□□□ 0.32
COPS7B-217ENST00000461350 APLP2Q06481 763 aa17.04■□□□□ 0.32
COPS7B-217ENST00000461350 CTTNBP2Q8WZ74 1663 aa17.04■□□□□ 0.32
COPS7B-217ENST00000461350 FHAD1B1AJZ9 1412 aa17.03■□□□□ 0.32
COPS7B-217ENST00000461350 ADAMTS12P58397 1594 aa17.03■□□□□ 0.32
COPS7B-217ENST00000461350 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.01■□□□□ 0.31
COPS7B-217ENST00000461350 SNAPC4Q5SXM2 1469 aa17.01■□□□□ 0.31
COPS7B-217ENST00000461350 CCER1Q8TC90 406 aaPredicted RBP17.01■□□□□ 0.31
COPS7B-217ENST00000461350 FHOD3Q2V2M9 1422 aa16.98■□□□□ 0.31
COPS7B-217ENST00000461350 FBLN2P98095 1184 aa16.96■□□□□ 0.31
COPS7B-217ENST00000461350 KANK4Q5T7N3 995 aaPredicted RBP16.94■□□□□ 0.3
COPS7B-217ENST00000461350 ATP1B4Q9UN42 357 aaPredicted RBP16.94■□□□□ 0.3
COPS7B-217ENST00000461350 CHMP7Q8WUX9 453 aaPredicted RBP16.91■□□□□ 0.3
COPS7B-217ENST00000461350 EFCAB5A4FU69 1503 aa16.9■□□□□ 0.3
COPS7B-217ENST00000461350 GRIN2AQ12879 1464 aa16.89■□□□□ 0.29
COPS7B-217ENST00000461350 ACIN1Q9UKV3 1341 aaKnown RBP16.89■□□□□ 0.29
COPS7B-217ENST00000461350 MAGI1Q96QZ7 1491 aaPredicted RBP16.89■□□□□ 0.29
COPS7B-217ENST00000461350 IQGAP2Q13576 1575 aa16.87■□□□□ 0.29
COPS7B-217ENST00000461350 PCF11O94913 1555 aaKnown RBP16.86■□□□□ 0.29
COPS7B-217ENST00000461350 NEUROD1Q13562 356 aa16.85■□□□□ 0.29
COPS7B-217ENST00000461350 SYNJ2O15056 1496 aa16.85■□□□□ 0.29
COPS7B-217ENST00000461350 SAMD9Q5K651 1589 aa16.85■□□□□ 0.29
COPS7B-217ENST00000461350 DIEXFQ68CQ4 756 aaKnown RBP16.82■□□□□ 0.28
COPS7B-217ENST00000461350 KIAA0586Q9BVV6 1533 aa16.8■□□□□ 0.28
COPS7B-217ENST00000461350 CEP170Q5SW79 1584 aa16.8■□□□□ 0.28
COPS7B-217ENST00000461350 TIAM1Q13009 1591 aa16.79■□□□□ 0.28
COPS7B-217ENST00000461350 FMN1Q68DA7 1419 aa16.79■□□□□ 0.28
COPS7B-217ENST00000461350 CENPBP07199 599 aaPredicted RBP16.79■□□□□ 0.28
COPS7B-217ENST00000461350 CASKIN1Q8WXD9 1431 aa16.78■□□□□ 0.28
COPS7B-217ENST00000461350 HNRNPUL2Q1KMD3 747 aaKnown RBP16.77■□□□□ 0.28
COPS7B-217ENST00000461350 FYCO1Q9BQS8 1478 aa16.77■□□□□ 0.27
COPS7B-217ENST00000461350 GTF3C3Q9Y5Q9 886 aa16.75■□□□□ 0.27
COPS7B-217ENST00000461350 UGGT2Q9NYU1 1516 aa16.75■□□□□ 0.27
COPS7B-217ENST00000461350 LRRC9Q6ZRR7 1453 aa16.73■□□□□ 0.27
COPS7B-217ENST00000461350 ARID3CA6NKF2 412 aa16.73■□□□□ 0.27
COPS7B-217ENST00000461350 NUP160Q12769 1436 aa16.73■□□□□ 0.27
COPS7B-217ENST00000461350 DISP1Q96F81 1524 aa16.72■□□□□ 0.27
COPS7B-217ENST00000461350 MAP3K1Q13233 1512 aa16.72■□□□□ 0.27
COPS7B-217ENST00000461350 CFAP43Q8NDM7 1665 aa16.72■□□□□ 0.27
COPS7B-217ENST00000461350 JPH4Q96JJ6 628 aa16.7■□□□□ 0.26
COPS7B-217ENST00000461350 LRRIQ1Q96JM4 1722 aa16.7■□□□□ 0.26
COPS7B-217ENST00000461350 KIAA0556O60303 1618 aa16.7■□□□□ 0.26
COPS7B-217ENST00000461350 CHD1O14646 1710 aa16.69■□□□□ 0.26
COPS7B-217ENST00000461350 PHLDB1Q86UU1 1377 aa16.65■□□□□ 0.26
COPS7B-217ENST00000461350 ITGAEP38570 1179 aa16.63■□□□□ 0.25
COPS7B-217ENST00000461350 MTUS2Q5JR59 1369 aa16.63■□□□□ 0.25
COPS7B-217ENST00000461350 RRBP1Q9P2E9 1410 aaKnown RBP16.62■□□□□ 0.25
COPS7B-217ENST00000461350 CCNB3Q8WWL7 1395 aa16.62■□□□□ 0.25
COPS7B-217ENST00000461350 CDK13Q14004 1512 aaKnown RBP16.61■□□□□ 0.25
COPS7B-217ENST00000461350 HECW1Q76N89 1606 aa16.6■□□□□ 0.25
COPS7B-217ENST00000461350 CARMIL2Q6F5E8 1435 aa16.59■□□□□ 0.25
COPS7B-217ENST00000461350 EPRSP07814 1512 aaKnown RBP16.59■□□□□ 0.25
COPS7B-217ENST00000461350 MAGI3Q5TCQ9 1506 aa16.57■□□□□ 0.24
COPS7B-217ENST00000461350 PLB1Q6P1J6 1458 aa16.57■□□□□ 0.24
COPS7B-217ENST00000461350 PRG4Q92954 1404 aaPredicted RBP16.57■□□□□ 0.24
COPS7B-217ENST00000461350 ZNF316A6NFI3 1004 aaPredicted RBP16.57■□□□□ 0.24
COPS7B-217ENST00000461350 FAM50AQ14320 339 aaKnown RBP16.57■□□□□ 0.24
COPS7B-217ENST00000461350 YTHDC1Q96MU7 727 aaKnown RBP16.56■□□□□ 0.24
COPS7B-217ENST00000461350 CCDC18Q5T9S5 1454 aa16.56■□□□□ 0.24
COPS7B-217ENST00000461350 NUP153P49790 1475 aaKnown RBP16.55■□□□□ 0.24
COPS7B-217ENST00000461350 RAPGEF6Q8TEU7 1601 aa16.55■□□□□ 0.24
COPS7B-217ENST00000461350 NCOA2Q15596 1464 aa16.52■□□□□ 0.24
COPS7B-217ENST00000461350 EHBP1L1Q8N3D4 1523 aa16.51■□□□□ 0.23
COPS7B-217ENST00000461350 SUPT6HQ7KZ85 1726 aaKnown RBP16.49■□□□□ 0.23
COPS7B-217ENST00000461350 ERCC6L2Q5T890 1561 aa16.49■□□□□ 0.23
COPS7B-217ENST00000461350 PTPRGP23470 1445 aa16.47■□□□□ 0.23
COPS7B-217ENST00000461350 FGD6Q6ZV73 1430 aa16.47■□□□□ 0.23
COPS7B-217ENST00000461350 SHROOM2Q13796 1616 aa16.46■□□□□ 0.22
COPS7B-217ENST00000461350 MYOM3Q5VTT5 1437 aa16.44■□□□□ 0.22
COPS7B-217ENST00000461350 MYT1Q01538 1121 aa16.44■□□□□ 0.22
COPS7B-217ENST00000461350 CLASP1Q7Z460 1538 aa16.43■□□□□ 0.22
COPS7B-217ENST00000461350 ABCA8O94911 1581 aa16.43■□□□□ 0.22
COPS7B-217ENST00000461350 ARHGEF11O15085 1522 aa16.42■□□□□ 0.22
COPS7B-217ENST00000461350 CDK11AQ9UQ88 783 aaPredicted RBP16.42■□□□□ 0.22
COPS7B-217ENST00000461350 MIER1Q8N108 512 aa16.41■□□□□ 0.22
COPS7B-217ENST00000461350 ATP10BO94823 1461 aa16.39■□□□□ 0.21
COPS7B-217ENST00000461350 TROQ12816 1431 aaPredicted RBP16.36■□□□□ 0.21
COPS7B-217ENST00000461350 PTPN23Q9H3S7 1636 aa16.36■□□□□ 0.21
COPS7B-217ENST00000461350 RAB3GAP2Q9H2M9 1393 aa16.35■□□□□ 0.21
COPS7B-217ENST00000461350 PLEKHD1A6NEE1 506 aa16.35■□□□□ 0.21
COPS7B-217ENST00000461350 PTPRKQ15262 1439 aa16.35■□□□□ 0.21
COPS7B-217ENST00000461350 UACAQ9BZF9 1416 aa16.35■□□□□ 0.21
COPS7B-217ENST00000461350 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.35■□□□□ 0.21
COPS7B-217ENST00000461350 KIF14Q15058 1648 aa16.35■□□□□ 0.21
COPS7B-217ENST00000461350 ZNF644Q9H582 1327 aaPredicted RBP16.32■□□□□ 0.2
COPS7B-217ENST00000461350 DHX57Q6P158 1386 aaKnown RBP16.32■□□□□ 0.2
COPS7B-217ENST00000461350 SETD5Q9C0A6 1442 aa16.32■□□□□ 0.2
COPS7B-217ENST00000461350 OSCARQ8IYS5 282 aa16.31■□□□□ 0.2
COPS7B-217ENST00000461350 CHIC2Q9UKJ5 165 aa16.31■□□□□ 0.2
COPS7B-217ENST00000461350 MIA2Q96PC5 1412 aa16.28■□□□□ 0.2
COPS7B-217ENST00000461350 ZNF777Q9ULD5 760 aaPredicted RBP16.28■□□□□ 0.2
COPS7B-217ENST00000461350 TCOF1Q13428 1488 aaKnown RBP16.28■□□□□ 0.2
COPS7B-217ENST00000461350 ABCC2Q92887 1545 aa16.27■□□□□ 0.2
COPS7B-217ENST00000461350 CFDP1Q9UEE9 299 aaPredicted RBP16.27■□□□□ 0.2
COPS7B-217ENST00000461350 RRP7BPQ9NSQ0 103 aa16.26■□□□□ 0.19
COPS7B-217ENST00000461350 ADCY10Q96PN6 1610 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms