RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 KDM6BO15054 1643 aa23.2■■□□□ 1.3
C9orf78-202ENST00000461349 TOP2BQ02880 1626 aa23.2■■□□□ 1.3
C9orf78-202ENST00000461349 DIP2BQ9P265 1576 aa23.2■■□□□ 1.3
C9orf78-202ENST00000461349 MAPKBP1O60336 1514 aa23.2■■□□□ 1.3
C9orf78-202ENST00000461349 TSPOAP1O95153 1857 aa23.16■■□□□ 1.3
C9orf78-202ENST00000461349 JPH4Q96JJ6 628 aa23.16■■□□□ 1.3
C9orf78-202ENST00000461349 RUSC2Q8N2Y8 1516 aa23.13■■□□□ 1.29
C9orf78-202ENST00000461349 ADCY10Q96PN6 1610 aa23.11■■□□□ 1.29
C9orf78-202ENST00000461349 KDM4FA0A1W2PPD8 638 aa23.1■■□□□ 1.29
C9orf78-202ENST00000461349 ILDR1Q86SU0 546 aaPredicted RBP23.06■■□□□ 1.28
C9orf78-202ENST00000461349 KIAA0586Q9BVV6 1533 aa22.9■■□□□ 1.26
C9orf78-202ENST00000461349 SUPT5HO00267 1087 aaKnown RBP22.89■■□□□ 1.25
C9orf78-202ENST00000461349 ADGRL1O94910 1474 aa22.85■■□□□ 1.25
C9orf78-202ENST00000461349 CUL7Q14999 1698 aa22.85■■□□□ 1.25
C9orf78-202ENST00000461349 PPRC1Q5VV67 1664 aaKnown RBP22.84■■□□□ 1.25
C9orf78-202ENST00000461349 PTPRGP23470 1445 aa22.81■■□□□ 1.24
C9orf78-202ENST00000461349 GLI2P10070 1586 aa22.8■■□□□ 1.24
C9orf78-202ENST00000461349 ABCC2Q92887 1545 aa22.79■■□□□ 1.24
C9orf78-202ENST00000461349 PLB1Q6P1J6 1458 aa22.78■■□□□ 1.24
C9orf78-202ENST00000461349 TTBK1Q5TCY1 1321 aaPredicted RBP22.77■■□□□ 1.24
C9orf78-202ENST00000461349 HECW2Q9P2P5 1572 aa22.76■■□□□ 1.23
C9orf78-202ENST00000461349 ASXL2Q76L83 1435 aa22.76■■□□□ 1.23
C9orf78-202ENST00000461349 CARMIL2Q6F5E8 1435 aa22.74■■□□□ 1.23
C9orf78-202ENST00000461349 TNIKQ9UKE5 1360 aa22.72■■□□□ 1.23
C9orf78-202ENST00000461349 KIF27Q86VH2 1401 aa22.71■■□□□ 1.23
C9orf78-202ENST00000461349 IGF1RP08069 1367 aa22.7■■□□□ 1.22
C9orf78-202ENST00000461349 MAP3K4Q9Y6R4 1608 aa22.69■■□□□ 1.22
C9orf78-202ENST00000461349 TEX14Q8IWB6 1497 aa22.67■■□□□ 1.22
C9orf78-202ENST00000461349 UHRF1BP1LA0JNW5 1464 aa22.66■■□□□ 1.22
C9orf78-202ENST00000461349 IQGAP2Q13576 1575 aa22.65■■□□□ 1.22
C9orf78-202ENST00000461349 COL17A1Q9UMD9 1497 aaPredicted RBP22.62■■□□□ 1.21
C9orf78-202ENST00000461349 UACAQ9BZF9 1416 aa22.62■■□□□ 1.21
C9orf78-202ENST00000461349 EPRSP07814 1512 aaKnown RBP22.62■■□□□ 1.21
C9orf78-202ENST00000461349 ZCCHC11Q5TAX3 1644 aaKnown RBP22.59■■□□□ 1.21
C9orf78-202ENST00000461349 CARMIL1Q5VZK9 1371 aa22.58■■□□□ 1.21
C9orf78-202ENST00000461349 KDM5BQ9UGL1 1544 aa22.57■■□□□ 1.2
C9orf78-202ENST00000461349 DISP1Q96F81 1524 aa22.52■■□□□ 1.2
C9orf78-202ENST00000461349 CFAP43Q8NDM7 1665 aa22.46■■□□□ 1.19
C9orf78-202ENST00000461349 WDR7Q9Y4E6 1490 aa22.46■■□□□ 1.19
C9orf78-202ENST00000461349 KIAA0556O60303 1618 aa22.45■■□□□ 1.18
C9orf78-202ENST00000461349 UGGT2Q9NYU1 1516 aa22.44■■□□□ 1.18
C9orf78-202ENST00000461349 FBXO41Q8TF61 875 aa22.43■■□□□ 1.18
C9orf78-202ENST00000461349 KIF21BO75037 1637 aa22.42■■□□□ 1.18
C9orf78-202ENST00000461349 MAGI3Q5TCQ9 1506 aa22.39■■□□□ 1.17
C9orf78-202ENST00000461349 CD109Q6YHK3 1445 aa22.38■■□□□ 1.17
C9orf78-202ENST00000461349 RAPGEF2Q9Y4G8 1499 aa22.34■■□□□ 1.17
C9orf78-202ENST00000461349 CTTNBP2Q8WZ74 1663 aa22.33■■□□□ 1.16
C9orf78-202ENST00000461349 KCNH8Q96L42 1107 aa22.3■■□□□ 1.16
C9orf78-202ENST00000461349 GOLGA3Q08378 1498 aa22.25■■□□□ 1.15
C9orf78-202ENST00000461349 ABCA8O94911 1581 aa22.25■■□□□ 1.15
C9orf78-202ENST00000461349 ARAP3Q8WWN8 1544 aa22.24■■□□□ 1.15
C9orf78-202ENST00000461349 ADAMTSL3P82987 1691 aa22.23■■□□□ 1.15
C9orf78-202ENST00000461349 PTPRMP28827 1452 aa22.22■■□□□ 1.15
C9orf78-202ENST00000461349 PCF11O94913 1555 aaKnown RBP22.16■■□□□ 1.14
C9orf78-202ENST00000461349 BCORL1Q5H9F3 1711 aa22.15■■□□□ 1.14
C9orf78-202ENST00000461349 PHLDB1Q86UU1 1377 aa22.13■■□□□ 1.13
C9orf78-202ENST00000461349 ABCA9Q8IUA7 1624 aa22.13■■□□□ 1.13
C9orf78-202ENST00000461349 MADDQ8WXG6 1647 aa22.13■■□□□ 1.13
C9orf78-202ENST00000461349 FAM9AQ8IZU1 332 aaPredicted RBP22.12■■□□□ 1.13
C9orf78-202ENST00000461349 LMTK3Q96Q04 1460 aa22.08■■□□□ 1.12
C9orf78-202ENST00000461349 ARID4BQ4LE39 1312 aaPredicted RBP22.07■■□□□ 1.12
C9orf78-202ENST00000461349 RIMS1Q86UR5 1692 aaKnown RBP22.07■■□□□ 1.12
C9orf78-202ENST00000461349 NEO1Q92859 1461 aa22.05■■□□□ 1.12
C9orf78-202ENST00000461349 RAPGEF3O95398 923 aa22.04■■□□□ 1.12
C9orf78-202ENST00000461349 ARID3CA6NKF2 412 aa22.03■■□□□ 1.12
C9orf78-202ENST00000461349 FRMPD1Q5SYB0 1578 aa22.02■■□□□ 1.12
C9orf78-202ENST00000461349 ATP10BO94823 1461 aa22.02■■□□□ 1.12
C9orf78-202ENST00000461349 ARHGEF40Q8TER5 1519 aa21.97■■□□□ 1.11
C9orf78-202ENST00000461349 RAPGEF6Q8TEU7 1601 aa21.95■■□□□ 1.1
C9orf78-202ENST00000461349 RICTORQ6R327 1708 aa21.94■■□□□ 1.1
C9orf78-202ENST00000461349 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.91■■□□□ 1.1
C9orf78-202ENST00000461349 HSPA2P54652 639 aa21.91■■□□□ 1.1
C9orf78-202ENST00000461349 HNRNPUL2Q1KMD3 747 aaKnown RBP21.91■■□□□ 1.1
C9orf78-202ENST00000461349 P3H3Q8IVL6 736 aa21.91■■□□□ 1.1
C9orf78-202ENST00000461349 CFAP74Q9C0B2 1584 aa21.91■■□□□ 1.1
C9orf78-202ENST00000461349 PRXQ9BXM0 1461 aa21.9■■□□□ 1.1
C9orf78-202ENST00000461349 POGZQ7Z3K3 1410 aa21.9■■□□□ 1.1
C9orf78-202ENST00000461349 CERKQ8TCT0 537 aa21.9■■□□□ 1.1
C9orf78-202ENST00000461349 FANCAO15360 1455 aa21.9■■□□□ 1.1
C9orf78-202ENST00000461349 PLPPR3Q6T4P5 718 aa21.88■■□□□ 1.09
C9orf78-202ENST00000461349 DENND4BO75064 1496 aaPredicted RBP21.88■■□□□ 1.09
C9orf78-202ENST00000461349 FER1L4A9Z1Z3 1794 aa21.87■■□□□ 1.09
C9orf78-202ENST00000461349 SAMD9Q5K651 1589 aa21.87■■□□□ 1.09
C9orf78-202ENST00000461349 AKNAQ7Z591 1439 aa21.84■■□□□ 1.09
C9orf78-202ENST00000461349 EFCAB5A4FU69 1503 aa21.83■■□□□ 1.09
C9orf78-202ENST00000461349 FHOD3Q2V2M9 1422 aa21.81■■□□□ 1.08
C9orf78-202ENST00000461349 ZMYM4Q5VZL5 1548 aa21.81■■□□□ 1.08
C9orf78-202ENST00000461349 ZFYVE16Q7Z3T8 1539 aa21.81■■□□□ 1.08
C9orf78-202ENST00000461349 DISP3Q9P2K9 1392 aa21.81■■□□□ 1.08
C9orf78-202ENST00000461349 SIGLEC1Q9BZZ2 1709 aa21.8■■□□□ 1.08
C9orf78-202ENST00000461349 PREX1Q8TCU6 1659 aa21.8■■□□□ 1.08
C9orf78-202ENST00000461349 TTC37Q6PGP7 1564 aa21.8■■□□□ 1.08
C9orf78-202ENST00000461349 NUP153P49790 1475 aaKnown RBP21.78■■□□□ 1.08
C9orf78-202ENST00000461349 SOCS7O14512 581 aa21.76■■□□□ 1.07
C9orf78-202ENST00000461349 MAGI2Q86UL8 1455 aa21.76■■□□□ 1.07
C9orf78-202ENST00000461349 PLEKHD1A6NEE1 506 aa21.75■■□□□ 1.07
C9orf78-202ENST00000461349 YEATS2Q9ULM3 1422 aa21.73■■□□□ 1.07
C9orf78-202ENST00000461349 MLECQ14165 292 aa21.73■■□□□ 1.07
C9orf78-202ENST00000461349 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.73■■□□□ 1.07
C9orf78-202ENST00000461349 ILDR2Q71H61 639 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms