RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 NISCHQ9Y2I1 1504 aa32.7■■■□□ 2.83
C9orf78-202ENST00000461349 ABCC9O60706 1549 aa30.19■■■□□ 2.42
C9orf78-202ENST00000461349 CCDC180Q9P1Z9 1646 aa29.72■■■□□ 2.35
C9orf78-202ENST00000461349 DNAJC5BQ9UF47 199 aa28.73■■■□□ 2.19
C9orf78-202ENST00000461349 RB1CC1Q8TDY2 1594 aa28.55■■■□□ 2.16
C9orf78-202ENST00000461349 NACADO15069 1562 aa28.18■■■□□ 2.1
C9orf78-202ENST00000461349 UNC13AQ9UPW8 1703 aa27.96■■■□□ 2.07
C9orf78-202ENST00000461349 PABPN1Q86U42 306 aaKnown RBP eCLIP27.95■■■□□ 2.06
C9orf78-202ENST00000461349 DCAF8L2P0C7V8 631 aa27.86■■■□□ 2.05
C9orf78-202ENST00000461349 BICRAQ9NZM4 1560 aa27.67■■■□□ 2.02
C9orf78-202ENST00000461349 MYO15BQ96JP2 1530 aa27.56■■■□□ 2
C9orf78-202ENST00000461349 SHROOM4Q9ULL8 1493 aa27.29■■□□□ 1.96
C9orf78-202ENST00000461349 CC2D2AQ9P2K1 1620 aa27.28■■□□□ 1.96
C9orf78-202ENST00000461349 CECR2Q9BXF3 1484 aa27.26■■□□□ 1.95
C9orf78-202ENST00000461349 EIF4G1Q04637 1599 aaKnown RBP27.07■■□□□ 1.92
C9orf78-202ENST00000461349 SCRIBQ14160 1630 aa26.99■■□□□ 1.91
C9orf78-202ENST00000461349 DCAF1Q9Y4B6 1507 aa26.99■■□□□ 1.91
C9orf78-202ENST00000461349 ZCCHC6Q5VYS8 1495 aaKnown RBP26.97■■□□□ 1.91
C9orf78-202ENST00000461349 DNAJC5Q9H3Z4 198 aa26.9■■□□□ 1.9
C9orf78-202ENST00000461349 CUX2O14529 1486 aa26.3■■□□□ 1.8
C9orf78-202ENST00000461349 ERCC6Q03468 1493 aa26.17■■□□□ 1.78
C9orf78-202ENST00000461349 NCAPD3P42695 1498 aa25.96■■□□□ 1.75
C9orf78-202ENST00000461349 ATAD2BQ9ULI0 1458 aa25.79■■□□□ 1.72
C9orf78-202ENST00000461349 HMGXB3Q12766 1538 aa25.77■■□□□ 1.72
C9orf78-202ENST00000461349 SMARCA2P51531 1590 aa25.76■■□□□ 1.71
C9orf78-202ENST00000461349 NESP48681 1621 aa25.74■■□□□ 1.71
C9orf78-202ENST00000461349 SMARCA4P51532 1647 aa25.68■■□□□ 1.7
C9orf78-202ENST00000461349 THOC2Q8NI27 1593 aaKnown RBP25.67■■□□□ 1.7
C9orf78-202ENST00000461349 BAZ1BQ9UIG0 1483 aaKnown RBP25.57■■□□□ 1.68
C9orf78-202ENST00000461349 LAMC3Q9Y6N6 1575 aa25.56■■□□□ 1.68
C9orf78-202ENST00000461349 KIF21AQ7Z4S6 1674 aa25.52■■□□□ 1.68
C9orf78-202ENST00000461349 TRIM41Q8WV44 630 aa25.51■■□□□ 1.67
C9orf78-202ENST00000461349 BAZ1AQ9NRL2 1556 aaPredicted RBP25.47■■□□□ 1.67
C9orf78-202ENST00000461349 PEG3Q9GZU2 1588 aa25.42■■□□□ 1.66
C9orf78-202ENST00000461349 PDS5BQ9NTI5 1447 aa25.38■■□□□ 1.65
C9orf78-202ENST00000461349 MRC2Q9UBG0 1479 aa25.21■■□□□ 1.63
C9orf78-202ENST00000461349 MROH2BQ7Z745 1585 aa25.17■■□□□ 1.62
C9orf78-202ENST00000461349 WDR62O43379 1518 aa25.16■■□□□ 1.62
C9orf78-202ENST00000461349 CADPSQ9ULU8 1353 aa25.13■■□□□ 1.61
C9orf78-202ENST00000461349 CEP164Q9UPV0 1460 aa25■■□□□ 1.59
C9orf78-202ENST00000461349 OSCARQ8IYS5 282 aa24.97■■□□□ 1.59
C9orf78-202ENST00000461349 WIZO95785 1651 aa24.9■■□□□ 1.58
C9orf78-202ENST00000461349 FANCD2Q9BXW9 1451 aa24.89■■□□□ 1.57
C9orf78-202ENST00000461349 RIMBP3CA6NJZ7 1639 aa24.77■■□□□ 1.56
C9orf78-202ENST00000461349 RIMBP3BA6NNM3 1639 aa24.77■■□□□ 1.56
C9orf78-202ENST00000461349 RIMBP3Q9UFD9 1639 aa24.77■■□□□ 1.56
C9orf78-202ENST00000461349 CFTRP13569 1480 aa24.73■■□□□ 1.55
C9orf78-202ENST00000461349 URB2Q14146 1524 aaKnown RBP24.7■■□□□ 1.54
C9orf78-202ENST00000461349 PRDM2Q13029 1718 aa24.64■■□□□ 1.53
C9orf78-202ENST00000461349 ARHGEF11O15085 1522 aa24.59■■□□□ 1.53
C9orf78-202ENST00000461349 TOP2AP11388 1531 aaKnown RBP24.53■■□□□ 1.52
C9orf78-202ENST00000461349 IFT140Q96RY7 1462 aa24.5■■□□□ 1.51
C9orf78-202ENST00000461349 ZNF608Q9ULD9 1512 aaPredicted RBP24.48■■□□□ 1.51
C9orf78-202ENST00000461349 CYB5RLQ6IPT4 315 aa24.41■■□□□ 1.5
C9orf78-202ENST00000461349 EIF4G3O43432 1585 aaKnown RBP24.41■■□□□ 1.5
C9orf78-202ENST00000461349 RSF1Q96T23 1441 aaPredicted RBP24.4■■□□□ 1.5
C9orf78-202ENST00000461349 CHD1O14646 1710 aa24.39■■□□□ 1.5
C9orf78-202ENST00000461349 TRHP20396 242 aaPredicted RBP24.38■■□□□ 1.49
C9orf78-202ENST00000461349 TOPBP1Q92547 1522 aa24.34■■□□□ 1.49
C9orf78-202ENST00000461349 ABCC8Q09428 1581 aa24.3■■□□□ 1.48
C9orf78-202ENST00000461349 ARAP1Q96P48 1450 aa24.27■■□□□ 1.48
C9orf78-202ENST00000461349 DNMBPQ6XZF7 1577 aa24.25■■□□□ 1.47
C9orf78-202ENST00000461349 CCDC88BA6NC98 1476 aa24.2■■□□□ 1.47
C9orf78-202ENST00000461349 TARBP1Q13395 1621 aaKnown RBP24.2■■□□□ 1.46
C9orf78-202ENST00000461349 FBLN2P98095 1184 aa24.18■■□□□ 1.46
C9orf78-202ENST00000461349 AQRO60306 1485 aaKnown RBP eCLIP24.18■■□□□ 1.464e-8■■■■□ 22.6
C9orf78-202ENST00000461349 AEBP2Q6ZN18 517 aaPredicted RBP24.15■■□□□ 1.46
C9orf78-202ENST00000461349 POLA1P09884 1462 aaPredicted RBP24.05■■□□□ 1.44
C9orf78-202ENST00000461349 CLASP1Q7Z460 1538 aa24■■□□□ 1.43
C9orf78-202ENST00000461349 SYNJ1O43426 1573 aa23.99■■□□□ 1.43
C9orf78-202ENST00000461349 WDR97A6NE52 1622 aa23.97■■□□□ 1.43
C9orf78-202ENST00000461349 SNAPC4Q5SXM2 1469 aa23.95■■□□□ 1.42
C9orf78-202ENST00000461349 RAD54L2Q9Y4B4 1467 aa23.94■■□□□ 1.42
C9orf78-202ENST00000461349 TDRD9Q8NDG6 1382 aaKnown RBP23.93■■□□□ 1.42
C9orf78-202ENST00000461349 SOGA1O94964 1423 aa23.93■■□□□ 1.42
C9orf78-202ENST00000461349 CHMP7Q8WUX9 453 aaPredicted RBP23.9■■□□□ 1.42
C9orf78-202ENST00000461349 MAGI1Q96QZ7 1491 aaPredicted RBP23.88■■□□□ 1.41
C9orf78-202ENST00000461349 FGD5Q6ZNL6 1462 aa23.82■■□□□ 1.4
C9orf78-202ENST00000461349 SYNJ2O15056 1496 aa23.81■■□□□ 1.4
C9orf78-202ENST00000461349 GRIN2BQ13224 1484 aa23.81■■□□□ 1.4
C9orf78-202ENST00000461349 GAPVD1Q14C86 1478 aa23.78■■□□□ 1.4
C9orf78-202ENST00000461349 PBRM1Q86U86 1689 aa23.78■■□□□ 1.4
C9orf78-202ENST00000461349 CUX1P39880 1505 aa23.69■■□□□ 1.38
C9orf78-202ENST00000461349 ABCA5Q8WWZ7 1642 aa23.58■■□□□ 1.36
C9orf78-202ENST00000461349 ERCC6L2Q5T890 1561 aa23.55■■□□□ 1.36
C9orf78-202ENST00000461349 KIF13AQ9H1H9 1805 aa23.53■■□□□ 1.36
C9orf78-202ENST00000461349 ABCA10Q8WWZ4 1543 aa23.51■■□□□ 1.35
C9orf78-202ENST00000461349 GRIN2AQ12879 1464 aa23.5■■□□□ 1.35
C9orf78-202ENST00000461349 CEP170Q5SW79 1584 aa23.5■■□□□ 1.35
C9orf78-202ENST00000461349 SHROOM2Q13796 1616 aa23.44■■□□□ 1.34
C9orf78-202ENST00000461349 ADAMTS12P58397 1594 aa23.44■■□□□ 1.34
C9orf78-202ENST00000461349 NUP160Q12769 1436 aa23.42■■□□□ 1.34
C9orf78-202ENST00000461349 FHAD1B1AJZ9 1412 aa23.31■■□□□ 1.32
C9orf78-202ENST00000461349 WRNQ14191 1432 aaPredicted RBP eCLIP23.31■■□□□ 1.32
C9orf78-202ENST00000461349 PRG4Q92954 1404 aaPredicted RBP23.25■■□□□ 1.31
C9orf78-202ENST00000461349 ERICH3Q5RHP9 1530 aa23.24■■□□□ 1.31
C9orf78-202ENST00000461349 BIVM-ERCC5R4GMW8 1640 aa23.23■■□□□ 1.31
C9orf78-202ENST00000461349 ABCC10Q5T3U5 1492 aa23.23■■□□□ 1.31
C9orf78-202ENST00000461349 FAM69CQ0P6D2 419 aa23.22■■□□□ 1.31
C9orf78-202ENST00000461349 NPM1P06748 294 aaKnown RBP eCLIP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms