RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 TRIM26Q12899 539 aaPredicted RBP27.18■■□□□ 1.94
CDK11A-209ENST00000460465 PPARGC1BQ86YN6 1023 aaKnown RBP27.17■■□□□ 1.94
CDK11A-209ENST00000460465 SNAPC4Q5SXM2 1469 aa27.11■■□□□ 1.93
CDK11A-209ENST00000460465 MAGI1Q96QZ7 1491 aaPredicted RBP27.03■■□□□ 1.92
CDK11A-209ENST00000460465 EFCAB5A4FU69 1503 aa27.03■■□□□ 1.92
CDK11A-209ENST00000460465 GRIN2AQ12879 1464 aa26.95■■□□□ 1.91
CDK11A-209ENST00000460465 TTBK1Q5TCY1 1321 aaPredicted RBP26.95■■□□□ 1.9
CDK11A-209ENST00000460465 SAMD9Q5K651 1589 aa26.94■■□□□ 1.9
CDK11A-209ENST00000460465 IQGAP2Q13576 1575 aa26.93■■□□□ 1.9
CDK11A-209ENST00000460465 APLP2Q06481 763 aa26.93■■□□□ 1.9
CDK11A-209ENST00000460465 SYNJ2O15056 1496 aa26.93■■□□□ 1.9
CDK11A-209ENST00000460465 P3H3Q8IVL6 736 aa26.91■■□□□ 1.9
CDK11A-209ENST00000460465 FHOD3Q2V2M9 1422 aa26.91■■□□□ 1.9
CDK11A-209ENST00000460465 PCF11O94913 1555 aaKnown RBP26.84■■□□□ 1.89
CDK11A-209ENST00000460465 CHMP7Q8WUX9 453 aaPredicted RBP26.84■■□□□ 1.89
CDK11A-209ENST00000460465 CEP170Q5SW79 1584 aa26.82■■□□□ 1.88
CDK11A-209ENST00000460465 KIAA0586Q9BVV6 1533 aa26.82■■□□□ 1.88
CDK11A-209ENST00000460465 FBLN2P98095 1184 aa26.78■■□□□ 1.88
CDK11A-209ENST00000460465 UGGT2Q9NYU1 1516 aa26.78■■□□□ 1.88
CDK11A-209ENST00000460465 FMN1Q68DA7 1419 aa26.76■■□□□ 1.87
CDK11A-209ENST00000460465 TIAM1Q13009 1591 aa26.74■■□□□ 1.87
CDK11A-209ENST00000460465 FYCO1Q9BQS8 1478 aa26.74■■□□□ 1.87
CDK11A-209ENST00000460465 NUP160Q12769 1436 aa26.73■■□□□ 1.87
CDK11A-209ENST00000460465 MAP3K1Q13233 1512 aa26.73■■□□□ 1.87
CDK11A-209ENST00000460465 CASKIN1Q8WXD9 1431 aa26.72■■□□□ 1.87
CDK11A-209ENST00000460465 CFAP43Q8NDM7 1665 aa26.72■■□□□ 1.87
CDK11A-209ENST00000460465 CHD1O14646 1710 aa26.72■■□□□ 1.87
CDK11A-209ENST00000460465 KANK4Q5T7N3 995 aaPredicted RBP26.71■■□□□ 1.87
CDK11A-209ENST00000460465 KIAA0556O60303 1618 aa26.67■■□□□ 1.86
CDK11A-209ENST00000460465 DISP1Q96F81 1524 aa26.65■■□□□ 1.86
CDK11A-209ENST00000460465 ATP1B4Q9UN42 357 aaPredicted RBP26.63■■□□□ 1.85
CDK11A-209ENST00000460465 LRRIQ1Q96JM4 1722 aa26.62■■□□□ 1.85
CDK11A-209ENST00000460465 LRRC9Q6ZRR7 1453 aa26.59■■□□□ 1.85
CDK11A-209ENST00000460465 HECW1Q76N89 1606 aa26.53■■□□□ 1.84
CDK11A-209ENST00000460465 JPH4Q96JJ6 628 aa26.51■■□□□ 1.84
CDK11A-209ENST00000460465 CARMIL2Q6F5E8 1435 aa26.47■■□□□ 1.83
CDK11A-209ENST00000460465 HRCP23327 699 aa26.47■■□□□ 1.83
CDK11A-209ENST00000460465 CCDC18Q5T9S5 1454 aa26.45■■□□□ 1.82
CDK11A-209ENST00000460465 RAPGEF6Q8TEU7 1601 aa26.43■■□□□ 1.82
CDK11A-209ENST00000460465 RRBP1Q9P2E9 1410 aaKnown RBP26.42■■□□□ 1.82
CDK11A-209ENST00000460465 SHROOM2Q13796 1616 aa26.4■■□□□ 1.82
CDK11A-209ENST00000460465 EPRSP07814 1512 aaKnown RBP26.4■■□□□ 1.82
CDK11A-209ENST00000460465 MTUS2Q5JR59 1369 aa26.37■■□□□ 1.81
CDK11A-209ENST00000460465 PRG4Q92954 1404 aaPredicted RBP26.36■■□□□ 1.81
CDK11A-209ENST00000460465 CDK13Q14004 1512 aaKnown RBP26.36■■□□□ 1.81
CDK11A-209ENST00000460465 EHBP1L1Q8N3D4 1523 aa26.35■■□□□ 1.81
CDK11A-209ENST00000460465 PHLDB1Q86UU1 1377 aa26.35■■□□□ 1.81
CDK11A-209ENST00000460465 MAGI3Q5TCQ9 1506 aa26.34■■□□□ 1.81
CDK11A-209ENST00000460465 CLASP1Q7Z460 1538 aa26.34■■□□□ 1.81
CDK11A-209ENST00000460465 NUP153P49790 1475 aaKnown RBP26.33■■□□□ 1.81
CDK11A-209ENST00000460465 HNRNPUL2Q1KMD3 747 aaKnown RBP26.33■■□□□ 1.81
CDK11A-209ENST00000460465 CCNB3Q8WWL7 1395 aa26.33■■□□□ 1.8
CDK11A-209ENST00000460465 SUPT6HQ7KZ85 1726 aaKnown RBP26.31■■□□□ 1.8
CDK11A-209ENST00000460465 PLB1Q6P1J6 1458 aa26.31■■□□□ 1.8
CDK11A-209ENST00000460465 ARID3CA6NKF2 412 aa26.27■■□□□ 1.8
CDK11A-209ENST00000460465 ABCA8O94911 1581 aa26.26■■□□□ 1.79
CDK11A-209ENST00000460465 NCOA2Q15596 1464 aa26.25■■□□□ 1.79
CDK11A-209ENST00000460465 ERCC6L2Q5T890 1561 aa26.23■■□□□ 1.79
CDK11A-209ENST00000460465 ARHGEF11O15085 1522 aa26.21■■□□□ 1.79
CDK11A-209ENST00000460465 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.2■■□□□ 1.79
CDK11A-209ENST00000460465 PTPRGP23470 1445 aa26.2■■□□□ 1.78
CDK11A-209ENST00000460465 FGD6Q6ZV73 1430 aa26.15■■□□□ 1.78
CDK11A-209ENST00000460465 MYOM3Q5VTT5 1437 aa26.14■■□□□ 1.78
CDK11A-209ENST00000460465 FAM50AQ14320 339 aaKnown RBP26.11■■□□□ 1.77
CDK11A-209ENST00000460465 CCER1Q8TC90 406 aaPredicted RBP26.11■■□□□ 1.77
CDK11A-209ENST00000460465 CDK11AQ9UQ88 783 aaPredicted RBP26.1■■□□□ 1.77
CDK11A-209ENST00000460465 ITGAEP38570 1179 aa26.09■■□□□ 1.77
CDK11A-209ENST00000460465 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.09■■□□□ 1.77
CDK11A-209ENST00000460465 ZEB1P37275 1124 aaPredicted RBP26.09■■□□□ 1.77
CDK11A-209ENST00000460465 ATP10BO94823 1461 aa26.07■■□□□ 1.76
CDK11A-209ENST00000460465 TROQ12816 1431 aaPredicted RBP26.06■■□□□ 1.76
CDK11A-209ENST00000460465 UACAQ9BZF9 1416 aa26.06■■□□□ 1.76
CDK11A-209ENST00000460465 PTPN23Q9H3S7 1636 aa26.06■■□□□ 1.76
CDK11A-209ENST00000460465 ADCY10Q96PN6 1610 aa26.05■■□□□ 1.76
CDK11A-209ENST00000460465 KIF14Q15058 1648 aa26.01■■□□□ 1.75
CDK11A-209ENST00000460465 ABCC2Q92887 1545 aa26.01■■□□□ 1.75
CDK11A-209ENST00000460465 OSCARQ8IYS5 282 aa25.98■■□□□ 1.75
CDK11A-209ENST00000460465 TCOF1Q13428 1488 aaKnown RBP25.97■■□□□ 1.75
CDK11A-209ENST00000460465 MIA2Q96PC5 1412 aa25.97■■□□□ 1.75
CDK11A-209ENST00000460465 ITSN2Q9NZM3 1697 aa25.94■■□□□ 1.74
CDK11A-209ENST00000460465 PLEKHD1A6NEE1 506 aa25.94■■□□□ 1.74
CDK11A-209ENST00000460465 UHRF1BP1LA0JNW5 1464 aa25.9■■□□□ 1.74
CDK11A-209ENST00000460465 ZCCHC11Q5TAX3 1644 aaKnown RBP25.87■■□□□ 1.73
CDK11A-209ENST00000460465 PTPRKQ15262 1439 aa25.87■■□□□ 1.73
CDK11A-209ENST00000460465 SETD5Q9C0A6 1442 aa25.87■■□□□ 1.73
CDK11A-209ENST00000460465 CDC42BPAQ5VT25 1732 aa25.86■■□□□ 1.73
CDK11A-209ENST00000460465 RAB3GAP2Q9H2M9 1393 aa25.86■■□□□ 1.73
CDK11A-209ENST00000460465 GPATCH8Q9UKJ3 1502 aaKnown RBP25.85■■□□□ 1.73
CDK11A-209ENST00000460465 ABCC10Q5T3U5 1492 aa25.85■■□□□ 1.73
CDK11A-209ENST00000460465 KDM5BQ9UGL1 1544 aa25.81■■□□□ 1.72
CDK11A-209ENST00000460465 DHX57Q6P158 1386 aaKnown RBP25.81■■□□□ 1.72
CDK11A-209ENST00000460465 DNMT1P26358 1616 aaKnown RBP25.78■■□□□ 1.72
CDK11A-209ENST00000460465 CAMSAP2Q08AD1 1489 aa25.77■■□□□ 1.72
CDK11A-209ENST00000460465 CFDP1Q9UEE9 299 aaPredicted RBP25.76■■□□□ 1.71
CDK11A-209ENST00000460465 ZNF644Q9H582 1327 aaPredicted RBP25.76■■□□□ 1.71
CDK11A-209ENST00000460465 HFM1A2PYH4 1435 aa25.75■■□□□ 1.71
CDK11A-209ENST00000460465 DAPK1P53355 1430 aa25.73■■□□□ 1.71
CDK11A-209ENST00000460465 GCC2Q8IWJ2 1684 aa25.72■■□□□ 1.71
CDK11A-209ENST00000460465 PREX2Q70Z35 1606 aa25.72■■□□□ 1.71
CDK11A-209ENST00000460465 TTC37Q6PGP7 1564 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms