RNA–Protein interactions for RNA: ENST00000460390.6

EXD3-202, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 2

Gene EXD3, Length 1,432 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-202ENST00000460390 NUP160Q12769 1436 aa31.75■■■□□ 2.67
EXD3-202ENST00000460390 ERCC6L2Q5T890 1561 aa31.7■■■□□ 2.67
EXD3-202ENST00000460390 SHROOM2Q13796 1616 aa31.65■■■□□ 2.66
EXD3-202ENST00000460390 CSRNP3Q8WYN3 585 aa31.65■■■□□ 2.66
EXD3-202ENST00000460390 RAPGEF2Q9Y4G8 1499 aa31.64■■■□□ 2.66
EXD3-202ENST00000460390 FAM9AQ8IZU1 332 aaPredicted RBP31.59■■■□□ 2.65
EXD3-202ENST00000460390 PRXQ9BXM0 1461 aa31.58■■■□□ 2.65
EXD3-202ENST00000460390 AEBP2Q6ZN18 517 aaPredicted RBP31.49■■■□□ 2.63
EXD3-202ENST00000460390 PRG4Q92954 1404 aaPredicted RBP31.49■■■□□ 2.63
EXD3-202ENST00000460390 KIAA0586Q9BVV6 1533 aa31.46■■■□□ 2.63
EXD3-202ENST00000460390 KIF21BO75037 1637 aa31.42■■■□□ 2.62
EXD3-202ENST00000460390 JPH4Q96JJ6 628 aa31.41■■■□□ 2.62
EXD3-202ENST00000460390 CTTNBP2Q8WZ74 1663 aa31.38■■■□□ 2.61
EXD3-202ENST00000460390 IQGAP2Q13576 1575 aa31.36■■■□□ 2.61
EXD3-202ENST00000460390 KIF13AQ9H1H9 1805 aa31.34■■■□□ 2.61
EXD3-202ENST00000460390 NPM1P06748 294 aaKnown RBP eCLIP31.27■■■□□ 2.6
EXD3-202ENST00000460390 GOLGA3Q08378 1498 aa31.25■■■□□ 2.59
EXD3-202ENST00000460390 MAPKBP1O60336 1514 aa31.18■■■□□ 2.58
EXD3-202ENST00000460390 UGGT2Q9NYU1 1516 aa31.18■■■□□ 2.58
EXD3-202ENST00000460390 CARMIL2Q6F5E8 1435 aa31.16■■■□□ 2.58
EXD3-202ENST00000460390 ADCY10Q96PN6 1610 aa31.16■■■□□ 2.58
EXD3-202ENST00000460390 ABCC10Q5T3U5 1492 aa31.15■■■□□ 2.58
EXD3-202ENST00000460390 UBTFP17480 764 aaKnown RBP31.14■■■□□ 2.58
EXD3-202ENST00000460390 FAM69CQ0P6D2 419 aa31.14■■■□□ 2.58
EXD3-202ENST00000460390 EHMT2Q96KQ7 1210 aa31.14■■■□□ 2.58
EXD3-202ENST00000460390 DIP2BQ9P265 1576 aa31.09■■■□□ 2.57
EXD3-202ENST00000460390 DISP1Q96F81 1524 aa31.06■■■□□ 2.56
EXD3-202ENST00000460390 KIAA0556O60303 1618 aa31.04■■■□□ 2.56
EXD3-202ENST00000460390 TNIKQ9UKE5 1360 aa31■■■□□ 2.55
EXD3-202ENST00000460390 PTPRGP23470 1445 aa30.97■■■□□ 2.55
EXD3-202ENST00000460390 TTBK1Q5TCY1 1321 aaPredicted RBP30.94■■■□□ 2.54
EXD3-202ENST00000460390 SAMD9Q5K651 1589 aa30.94■■■□□ 2.54
EXD3-202ENST00000460390 KDM6BO15054 1643 aa30.94■■■□□ 2.54
EXD3-202ENST00000460390 TSPOAP1O95153 1857 aa30.93■■■□□ 2.54
EXD3-202ENST00000460390 RANGAP1P46060 587 aaPredicted RBP30.92■■■□□ 2.54
EXD3-202ENST00000460390 EFCAB5A4FU69 1503 aa30.89■■■□□ 2.54
EXD3-202ENST00000460390 ABCC2Q92887 1545 aa30.84■■■□□ 2.53
EXD3-202ENST00000460390 P3H3Q8IVL6 736 aa30.83■■■□□ 2.53
EXD3-202ENST00000460390 PLB1Q6P1J6 1458 aa30.77■■■□□ 2.52
EXD3-202ENST00000460390 UACAQ9BZF9 1416 aa30.76■■■□□ 2.51
EXD3-202ENST00000460390 ASXL2Q76L83 1435 aa30.75■■■□□ 2.51
EXD3-202ENST00000460390 UHRF1BP1LA0JNW5 1464 aa30.74■■■□□ 2.51
EXD3-202ENST00000460390 LOC105371045A0A1W2PR82 267 aa30.74■■■□□ 2.51
EXD3-202ENST00000460390 FHOD3Q2V2M9 1422 aa30.74■■■□□ 2.51
EXD3-202ENST00000460390 ARHGAP35Q9NRY4 1499 aa30.73■■■□□ 2.51
EXD3-202ENST00000460390 GLI2P10070 1586 aa30.7■■■□□ 2.5
EXD3-202ENST00000460390 CLIP1P30622 1438 aa30.67■■■□□ 2.5
EXD3-202ENST00000460390 ABCA8O94911 1581 aa30.67■■■□□ 2.5
EXD3-202ENST00000460390 PPRC1Q5VV67 1664 aaKnown RBP30.61■■■□□ 2.49
EXD3-202ENST00000460390 CEP162Q5TB80 1403 aa30.61■■■□□ 2.49
EXD3-202ENST00000460390 FMN1Q68DA7 1419 aa30.61■■■□□ 2.49
EXD3-202ENST00000460390 KDM5BQ9UGL1 1544 aa30.6■■■□□ 2.49
EXD3-202ENST00000460390 RAPGEF6Q8TEU7 1601 aa30.6■■■□□ 2.49
EXD3-202ENST00000460390 ZCCHC11Q5TAX3 1644 aaKnown RBP30.59■■■□□ 2.49
EXD3-202ENST00000460390 EPRSP07814 1512 aaKnown RBP30.55■■■□□ 2.48
EXD3-202ENST00000460390 MAP3K4Q9Y6R4 1608 aa30.54■■■□□ 2.48
EXD3-202ENST00000460390 KDM4FA0A1W2PPD8 638 aa30.54■■■□□ 2.48
EXD3-202ENST00000460390 TEX14Q8IWB6 1497 aa30.53■■■□□ 2.48
EXD3-202ENST00000460390 WDR7Q9Y4E6 1490 aa30.45■■■□□ 2.46
EXD3-202ENST00000460390 NUP153P49790 1475 aaKnown RBP30.44■■■□□ 2.46
EXD3-202ENST00000460390 HECW1Q76N89 1606 aa30.44■■■□□ 2.46
EXD3-202ENST00000460390 ATP10BO94823 1461 aa30.4■■■□□ 2.46
EXD3-202ENST00000460390 ARID3CA6NKF2 412 aa30.39■■■□□ 2.45
EXD3-202ENST00000460390 ATP1B4Q9UN42 357 aaPredicted RBP30.39■■■□□ 2.45
EXD3-202ENST00000460390 ADGRL1O94910 1474 aa30.37■■■□□ 2.45
EXD3-202ENST00000460390 CASKIN1Q8WXD9 1431 aa30.37■■■□□ 2.45
EXD3-202ENST00000460390 PCF11O94913 1555 aaKnown RBP30.36■■■□□ 2.45
EXD3-202ENST00000460390 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.36■■■□□ 2.45
EXD3-202ENST00000460390 HNRNPUL2Q1KMD3 747 aaKnown RBP30.36■■■□□ 2.45
EXD3-202ENST00000460390 FYCO1Q9BQS8 1478 aa30.33■■■□□ 2.45
EXD3-202ENST00000460390 COL17A1Q9UMD9 1497 aaPredicted RBP30.33■■■□□ 2.45
EXD3-202ENST00000460390 CFAP43Q8NDM7 1665 aa30.33■■■□□ 2.45
EXD3-202ENST00000460390 CD109Q6YHK3 1445 aa30.27■■■□□ 2.44
EXD3-202ENST00000460390 CDK13Q14004 1512 aaKnown RBP30.26■■■□□ 2.43
EXD3-202ENST00000460390 CCDC18Q5T9S5 1454 aa30.26■■■□□ 2.43
EXD3-202ENST00000460390 LRRIQ1Q96JM4 1722 aa30.26■■■□□ 2.43
EXD3-202ENST00000460390 KCNH8Q96L42 1107 aa30.25■■■□□ 2.43
EXD3-202ENST00000460390 MAGI3Q5TCQ9 1506 aa30.24■■■□□ 2.43
EXD3-202ENST00000460390 VPS8Q8N3P4 1428 aa30.23■■■□□ 2.43
EXD3-202ENST00000460390 PLEKHD1A6NEE1 506 aa30.22■■■□□ 2.43
EXD3-202ENST00000460390 CDK11AQ9UQ88 783 aaPredicted RBP30.21■■■□□ 2.43
EXD3-202ENST00000460390 TROQ12816 1431 aaPredicted RBP30.05■■■□□ 2.4
EXD3-202ENST00000460390 ABCA9Q8IUA7 1624 aa30.05■■■□□ 2.4
EXD3-202ENST00000460390 HECW2Q9P2P5 1572 aa30.03■■■□□ 2.4
EXD3-202ENST00000460390 ARAP3Q8WWN8 1544 aa30■■■□□ 2.39
EXD3-202ENST00000460390 KIF14Q15058 1648 aa30■■■□□ 2.39
EXD3-202ENST00000460390 TIAM1Q13009 1591 aa29.98■■■□□ 2.39
EXD3-202ENST00000460390 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.96■■■□□ 2.396e-7■■■■■ 30.4
EXD3-202ENST00000460390 PHLDB1Q86UU1 1377 aa29.96■■■□□ 2.39
EXD3-202ENST00000460390 MTUS2Q5JR59 1369 aa29.95■■■□□ 2.39
EXD3-202ENST00000460390 APLP2Q06481 763 aa29.95■■■□□ 2.38
EXD3-202ENST00000460390 MAP3K1Q13233 1512 aa29.94■■■□□ 2.38
EXD3-202ENST00000460390 EHBP1L1Q8N3D4 1523 aa29.92■■■□□ 2.38
EXD3-202ENST00000460390 TTC37Q6PGP7 1564 aa29.92■■■□□ 2.38
EXD3-202ENST00000460390 NEO1Q92859 1461 aa29.88■■■□□ 2.37
EXD3-202ENST00000460390 MYO5CQ9NQX4 1742 aa29.87■■■□□ 2.37
EXD3-202ENST00000460390 ILDR1Q86SU0 546 aaPredicted RBP29.86■■■□□ 2.37
EXD3-202ENST00000460390 LRRC9Q6ZRR7 1453 aa29.82■■■□□ 2.36
EXD3-202ENST00000460390 SUPT6HQ7KZ85 1726 aaKnown RBP29.81■■■□□ 2.36
EXD3-202ENST00000460390 CFAP74Q9C0B2 1584 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms