RNA–Protein interactions for RNA: ENST00000460390.6

EXD3-202, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 2

Gene EXD3, Length 1,432 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-202ENST00000460390 NISCHQ9Y2I1 1504 aa45.55■■■■■ 4.88
EXD3-202ENST00000460390 CCDC180Q9P1Z9 1646 aa40.42■■■■■ 4.06
EXD3-202ENST00000460390 ABCC9O60706 1549 aa40.4■■■■■ 4.06
EXD3-202ENST00000460390 RB1CC1Q8TDY2 1594 aa38.46■■■■□ 3.75
EXD3-202ENST00000460390 NACADO15069 1562 aa38.12■■■■□ 3.69
EXD3-202ENST00000460390 ZCCHC6Q5VYS8 1495 aaKnown RBP38.01■■■■□ 3.68
EXD3-202ENST00000460390 DCAF8L2P0C7V8 631 aa37.94■■■■□ 3.66
EXD3-202ENST00000460390 DNAJC5BQ9UF47 199 aa37.86■■■■□ 3.65
EXD3-202ENST00000460390 MYO15BQ96JP2 1530 aa37.77■■■■□ 3.64
EXD3-202ENST00000460390 DCAF1Q9Y4B6 1507 aa37.72■■■■□ 3.63
EXD3-202ENST00000460390 UNC13AQ9UPW8 1703 aa37.55■■■■□ 3.6
EXD3-202ENST00000460390 PABPN1Q86U42 306 aaKnown RBP eCLIP37.53■■■■□ 3.6
EXD3-202ENST00000460390 BICRAQ9NZM4 1560 aa37.22■■■■□ 3.55
EXD3-202ENST00000460390 SCRIBQ14160 1630 aa36.86■■■■□ 3.49
EXD3-202ENST00000460390 SHROOM4Q9ULL8 1493 aa36.83■■■■□ 3.49
EXD3-202ENST00000460390 CC2D2AQ9P2K1 1620 aa36.51■■■■□ 3.43
EXD3-202ENST00000460390 CECR2Q9BXF3 1484 aa36.43■■■■□ 3.42
EXD3-202ENST00000460390 EIF4G1Q04637 1599 aaKnown RBP36.39■■■■□ 3.42
EXD3-202ENST00000460390 BAZ1AQ9NRL2 1556 aaPredicted RBP35.32■■■■□ 3.24
EXD3-202ENST00000460390 SMARCA4P51532 1647 aa35.3■■■■□ 3.24
EXD3-202ENST00000460390 NCAPD3P42695 1498 aa35.13■■■■□ 3.21
EXD3-202ENST00000460390 MROH2BQ7Z745 1585 aa35.09■■■■□ 3.21
EXD3-202ENST00000460390 SMARCA2P51531 1590 aa35.02■■■■□ 3.2
EXD3-202ENST00000460390 ATAD2BQ9ULI0 1458 aa35■■■■□ 3.19
EXD3-202ENST00000460390 ERCC6Q03468 1493 aa34.99■■■■□ 3.19
EXD3-202ENST00000460390 DNAJC5Q9H3Z4 198 aa34.98■■■■□ 3.19
EXD3-202ENST00000460390 PEG3Q9GZU2 1588 aa34.95■■■■□ 3.19
EXD3-202ENST00000460390 CUX2O14529 1486 aa34.93■■■■□ 3.18
EXD3-202ENST00000460390 HMGXB3Q12766 1538 aa34.92■■■■□ 3.18
EXD3-202ENST00000460390 RSF1Q96T23 1441 aaPredicted RBP34.8■■■■□ 3.16
EXD3-202ENST00000460390 WIZO95785 1651 aa34.76■■■■□ 3.16
EXD3-202ENST00000460390 BAZ1BQ9UIG0 1483 aaKnown RBP34.76■■■■□ 3.15
EXD3-202ENST00000460390 NESP48681 1621 aa34.62■■■■□ 3.13
EXD3-202ENST00000460390 LAMC3Q9Y6N6 1575 aa34.46■■■■□ 3.11
EXD3-202ENST00000460390 TOP2AP11388 1531 aaKnown RBP34.43■■■■□ 3.1
EXD3-202ENST00000460390 THOC2Q8NI27 1593 aaKnown RBP34.36■■■■□ 3.09
EXD3-202ENST00000460390 KIF21AQ7Z4S6 1674 aa34.26■■■■□ 3.07
EXD3-202ENST00000460390 PDS5BQ9NTI5 1447 aa34.25■■■■□ 3.07
EXD3-202ENST00000460390 SUPT5HO00267 1087 aaKnown RBP34.19■■■■□ 3.06
EXD3-202ENST00000460390 CADPSQ9ULU8 1353 aa34.06■■■■□ 3.04
EXD3-202ENST00000460390 CCDC88BA6NC98 1476 aa33.98■■■■□ 3.03
EXD3-202ENST00000460390 MRC2Q9UBG0 1479 aa33.95■■■■□ 3.03
EXD3-202ENST00000460390 WDR62O43379 1518 aa33.86■■■■□ 3.01
EXD3-202ENST00000460390 CEP164Q9UPV0 1460 aa33.81■■■■□ 3
EXD3-202ENST00000460390 CFTRP13569 1480 aa33.8■■■■□ 3
EXD3-202ENST00000460390 FANCD2Q9BXW9 1451 aa33.71■■■□□ 2.99
EXD3-202ENST00000460390 PRDM2Q13029 1718 aa33.68■■■□□ 2.98
EXD3-202ENST00000460390 TRIM41Q8WV44 630 aa33.47■■■□□ 2.95
EXD3-202ENST00000460390 URB2Q14146 1524 aaKnown RBP33.4■■■□□ 2.94
EXD3-202ENST00000460390 OSCARQ8IYS5 282 aa33.27■■■□□ 2.92
EXD3-202ENST00000460390 ABCC8Q09428 1581 aa33.12■■■□□ 2.89
EXD3-202ENST00000460390 IFT140Q96RY7 1462 aa33.12■■■□□ 2.89
EXD3-202ENST00000460390 DNMBPQ6XZF7 1577 aa33.06■■■□□ 2.88
EXD3-202ENST00000460390 TOPBP1Q92547 1522 aa33.05■■■□□ 2.88
EXD3-202ENST00000460390 ZNF608Q9ULD9 1512 aaPredicted RBP33■■■□□ 2.87
EXD3-202ENST00000460390 EIF4G3O43432 1585 aaKnown RBP32.92■■■□□ 2.86
EXD3-202ENST00000460390 CUX1P39880 1505 aa32.9■■■□□ 2.86
EXD3-202ENST00000460390 RIMBP3CA6NJZ7 1639 aa32.88■■■□□ 2.85
EXD3-202ENST00000460390 RIMBP3BA6NNM3 1639 aa32.88■■■□□ 2.85
EXD3-202ENST00000460390 RIMBP3Q9UFD9 1639 aa32.88■■■□□ 2.85
EXD3-202ENST00000460390 WRNQ14191 1432 aaPredicted RBP eCLIP32.85■■■□□ 2.856e-6■■■■■ 36.2
EXD3-202ENST00000460390 POLA1P09884 1462 aaPredicted RBP32.79■■■□□ 2.84
EXD3-202ENST00000460390 FGD5Q6ZNL6 1462 aa32.76■■■□□ 2.84
EXD3-202ENST00000460390 TARBP1Q13395 1621 aaKnown RBP32.76■■■□□ 2.83
EXD3-202ENST00000460390 BIVM-ERCC5R4GMW8 1640 aa32.76■■■□□ 2.83
EXD3-202ENST00000460390 ARHGEF11O15085 1522 aa32.75■■■□□ 2.83
EXD3-202ENST00000460390 TOP2BQ02880 1626 aa32.75■■■□□ 2.83
EXD3-202ENST00000460390 SYNJ1O43426 1573 aa32.72■■■□□ 2.83
EXD3-202ENST00000460390 CHD1O14646 1710 aa32.71■■■□□ 2.83
EXD3-202ENST00000460390 AQRO60306 1485 aaKnown RBP eCLIP32.69■■■□□ 2.826e-7■■□□□ 11.9
EXD3-202ENST00000460390 SOGA1O94964 1423 aa32.67■■■□□ 2.82
EXD3-202ENST00000460390 RAD54L2Q9Y4B4 1467 aa32.62■■■□□ 2.81
EXD3-202ENST00000460390 FBLN2P98095 1184 aa32.6■■■□□ 2.81
EXD3-202ENST00000460390 WDR97A6NE52 1622 aa32.51■■■□□ 2.79
EXD3-202ENST00000460390 CYB5RLQ6IPT4 315 aa32.49■■■□□ 2.79
EXD3-202ENST00000460390 TDRD9Q8NDG6 1382 aaKnown RBP32.47■■■□□ 2.79
EXD3-202ENST00000460390 ABCA10Q8WWZ4 1543 aa32.47■■■□□ 2.79
EXD3-202ENST00000460390 SNAPC4Q5SXM2 1469 aa32.41■■■□□ 2.78
EXD3-202ENST00000460390 ARAP1Q96P48 1450 aa32.38■■■□□ 2.77
EXD3-202ENST00000460390 MAGI1Q96QZ7 1491 aaPredicted RBP32.35■■■□□ 2.77
EXD3-202ENST00000460390 ABCA5Q8WWZ7 1642 aa32.32■■■□□ 2.76
EXD3-202ENST00000460390 CHMP7Q8WUX9 453 aaPredicted RBP32.32■■■□□ 2.76
EXD3-202ENST00000460390 GRIN2BQ13224 1484 aa32.31■■■□□ 2.76
EXD3-202ENST00000460390 GAPVD1Q14C86 1478 aa32.31■■■□□ 2.76
EXD3-202ENST00000460390 TRHP20396 242 aaPredicted RBP32.26■■■□□ 2.76
EXD3-202ENST00000460390 CLASP1Q7Z460 1538 aa32.26■■■□□ 2.76
EXD3-202ENST00000460390 PBRM1Q86U86 1689 aa32.26■■■□□ 2.76
EXD3-202ENST00000460390 SYNJ2O15056 1496 aa32.23■■■□□ 2.75
EXD3-202ENST00000460390 KIF27Q86VH2 1401 aa32.16■■■□□ 2.74
EXD3-202ENST00000460390 ERICH3Q5RHP9 1530 aa32.11■■■□□ 2.73
EXD3-202ENST00000460390 CHIC1Q5VXU3 224 aa32.08■■■□□ 2.73
EXD3-202ENST00000460390 ADAMTS12P58397 1594 aa31.99■■■□□ 2.71
EXD3-202ENST00000460390 FHAD1B1AJZ9 1412 aa31.94■■■□□ 2.7
EXD3-202ENST00000460390 IGF1RP08069 1367 aa31.92■■■□□ 2.7
EXD3-202ENST00000460390 CUL7Q14999 1698 aa31.91■■■□□ 2.7
EXD3-202ENST00000460390 GRIN2AQ12879 1464 aa31.9■■■□□ 2.7
EXD3-202ENST00000460390 RUSC2Q8N2Y8 1516 aa31.88■■■□□ 2.69
EXD3-202ENST00000460390 CARMIL1Q5VZK9 1371 aa31.78■■■□□ 2.68
EXD3-202ENST00000460390 EEA1Q15075 1411 aa31.77■■■□□ 2.68
EXD3-202ENST00000460390 CEP170Q5SW79 1584 aa31.77■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms