RNA–Protein interactions for RNA: ENST00000453996.6

CTU2-202, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTU2, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-202ENST00000453996 TRIM26Q12899 539 aaPredicted RBP33.4■■■□□ 2.94
CTU2-202ENST00000453996 PCGF6Q9BYE7 350 aa33.38■■■□□ 2.93
CTU2-202ENST00000453996 MAGI1Q96QZ7 1491 aaPredicted RBP33.37■■■□□ 2.93
CTU2-202ENST00000453996 EFCAB5A4FU69 1503 aa33.35■■■□□ 2.93
CTU2-202ENST00000453996 PPARGC1BQ86YN6 1023 aaKnown RBP33.3■■■□□ 2.92
CTU2-202ENST00000453996 GRIN2AQ12879 1464 aa33.25■■■□□ 2.91
CTU2-202ENST00000453996 SYNJ2O15056 1496 aa33.24■■■□□ 2.91
CTU2-202ENST00000453996 IQGAP2Q13576 1575 aa33.22■■■□□ 2.91
CTU2-202ENST00000453996 SAMD9Q5K651 1589 aa33.21■■■□□ 2.91
CTU2-202ENST00000453996 APLP2Q06481 763 aa33.17■■■□□ 2.9
CTU2-202ENST00000453996 FHOD3Q2V2M9 1422 aa33.13■■■□□ 2.89
CTU2-202ENST00000453996 CHMP7Q8WUX9 453 aaPredicted RBP33.1■■■□□ 2.89
CTU2-202ENST00000453996 KIAA0586Q9BVV6 1533 aa33.09■■■□□ 2.89
CTU2-202ENST00000453996 P3H3Q8IVL6 736 aa33.09■■■□□ 2.89
CTU2-202ENST00000453996 CEP170Q5SW79 1584 aa33.06■■■□□ 2.88
CTU2-202ENST00000453996 TTBK1Q5TCY1 1321 aaPredicted RBP33.05■■■□□ 2.88
CTU2-202ENST00000453996 PCF11O94913 1555 aaKnown RBP33.05■■■□□ 2.88
CTU2-202ENST00000453996 UGGT2Q9NYU1 1516 aa33.04■■■□□ 2.88
CTU2-202ENST00000453996 FMN1Q68DA7 1419 aa33.01■■■□□ 2.87
CTU2-202ENST00000453996 FBLN2P98095 1184 aa33■■■□□ 2.87
CTU2-202ENST00000453996 NUP160Q12769 1436 aa32.99■■■□□ 2.87
CTU2-202ENST00000453996 FYCO1Q9BQS8 1478 aa32.98■■■□□ 2.87
CTU2-202ENST00000453996 MAP3K1Q13233 1512 aa32.96■■■□□ 2.87
CTU2-202ENST00000453996 CASKIN1Q8WXD9 1431 aa32.94■■■□□ 2.86
CTU2-202ENST00000453996 TIAM1Q13009 1591 aa32.94■■■□□ 2.86
CTU2-202ENST00000453996 CHD1O14646 1710 aa32.93■■■□□ 2.86
CTU2-202ENST00000453996 CFAP43Q8NDM7 1665 aa32.92■■■□□ 2.86
CTU2-202ENST00000453996 KIAA0556O60303 1618 aa32.89■■■□□ 2.86
CTU2-202ENST00000453996 DISP1Q96F81 1524 aa32.84■■■□□ 2.85
CTU2-202ENST00000453996 KANK4Q5T7N3 995 aaPredicted RBP32.83■■■□□ 2.85
CTU2-202ENST00000453996 ATP1B4Q9UN42 357 aaPredicted RBP32.75■■■□□ 2.83
CTU2-202ENST00000453996 LRRC9Q6ZRR7 1453 aa32.75■■■□□ 2.83
CTU2-202ENST00000453996 LRRIQ1Q96JM4 1722 aa32.74■■■□□ 2.83
CTU2-202ENST00000453996 HECW1Q76N89 1606 aa32.72■■■□□ 2.83
CTU2-202ENST00000453996 JPH4Q96JJ6 628 aa32.68■■■□□ 2.82
CTU2-202ENST00000453996 CARMIL2Q6F5E8 1435 aa32.68■■■□□ 2.82
CTU2-202ENST00000453996 CCDC18Q5T9S5 1454 aa32.63■■■□□ 2.81
CTU2-202ENST00000453996 SHROOM2Q13796 1616 aa32.58■■■□□ 2.81
CTU2-202ENST00000453996 RAPGEF6Q8TEU7 1601 aa32.58■■■□□ 2.81
CTU2-202ENST00000453996 RRBP1Q9P2E9 1410 aaKnown RBP32.53■■■□□ 2.8
CTU2-202ENST00000453996 EPRSP07814 1512 aaKnown RBP32.53■■■□□ 2.8
CTU2-202ENST00000453996 PRG4Q92954 1404 aaPredicted RBP32.51■■■□□ 2.8
CTU2-202ENST00000453996 CLASP1Q7Z460 1538 aa32.51■■■□□ 2.79
CTU2-202ENST00000453996 EHBP1L1Q8N3D4 1523 aa32.5■■■□□ 2.79
CTU2-202ENST00000453996 MTUS2Q5JR59 1369 aa32.48■■■□□ 2.79
CTU2-202ENST00000453996 HRCP23327 699 aa32.47■■■□□ 2.79
CTU2-202ENST00000453996 CDK13Q14004 1512 aaKnown RBP32.45■■■□□ 2.79
CTU2-202ENST00000453996 NUP153P49790 1475 aaKnown RBP32.45■■■□□ 2.79
CTU2-202ENST00000453996 PHLDB1Q86UU1 1377 aa32.42■■■□□ 2.78
CTU2-202ENST00000453996 SUPT6HQ7KZ85 1726 aaKnown RBP32.42■■■□□ 2.78
CTU2-202ENST00000453996 CCNB3Q8WWL7 1395 aa32.42■■■□□ 2.78
CTU2-202ENST00000453996 PLB1Q6P1J6 1458 aa32.41■■■□□ 2.78
CTU2-202ENST00000453996 MAGI3Q5TCQ9 1506 aa32.41■■■□□ 2.78
CTU2-202ENST00000453996 ABCA8O94911 1581 aa32.38■■■□□ 2.77
CTU2-202ENST00000453996 HNRNPUL2Q1KMD3 747 aaKnown RBP32.34■■■□□ 2.77
CTU2-202ENST00000453996 NCOA2Q15596 1464 aa32.32■■■□□ 2.77
CTU2-202ENST00000453996 PTPRGP23470 1445 aa32.31■■■□□ 2.76
CTU2-202ENST00000453996 ERCC6L2Q5T890 1561 aa32.3■■■□□ 2.76
CTU2-202ENST00000453996 ARID3CA6NKF2 412 aa32.29■■■□□ 2.76
CTU2-202ENST00000453996 ARHGEF11O15085 1522 aa32.29■■■□□ 2.76
CTU2-202ENST00000453996 FGD6Q6ZV73 1430 aa32.22■■■□□ 2.75
CTU2-202ENST00000453996 MYOM3Q5VTT5 1437 aa32.21■■■□□ 2.75
CTU2-202ENST00000453996 CDK11AQ9UQ88 783 aaPredicted RBP32.21■■■□□ 2.75
CTU2-202ENST00000453996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.19■■■□□ 2.74
CTU2-202ENST00000453996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.18■■■□□ 2.74
CTU2-202ENST00000453996 UACAQ9BZF9 1416 aa32.15■■■□□ 2.74
CTU2-202ENST00000453996 TROQ12816 1431 aaPredicted RBP32.13■■■□□ 2.73
CTU2-202ENST00000453996 ATP10BO94823 1461 aa32.13■■■□□ 2.73
CTU2-202ENST00000453996 FAM50AQ14320 339 aaKnown RBP32.13■■■□□ 2.73
CTU2-202ENST00000453996 ADCY10Q96PN6 1610 aa32.12■■■□□ 2.73
CTU2-202ENST00000453996 ZEB1P37275 1124 aaPredicted RBP32.09■■■□□ 2.73
CTU2-202ENST00000453996 ABCC2Q92887 1545 aa32.09■■■□□ 2.73
CTU2-202ENST00000453996 PTPN23Q9H3S7 1636 aa32.09■■■□□ 2.73
CTU2-202ENST00000453996 CCER1Q8TC90 406 aaPredicted RBP32.08■■■□□ 2.73
CTU2-202ENST00000453996 OSCARQ8IYS5 282 aa32.07■■■□□ 2.72
CTU2-202ENST00000453996 ITGAEP38570 1179 aa32.06■■■□□ 2.72
CTU2-202ENST00000453996 MIA2Q96PC5 1412 aa32.02■■■□□ 2.72
CTU2-202ENST00000453996 KIF14Q15058 1648 aa32.02■■■□□ 2.72
CTU2-202ENST00000453996 TCOF1Q13428 1488 aaKnown RBP32.01■■■□□ 2.71
CTU2-202ENST00000453996 ITSN2Q9NZM3 1697 aa31.99■■■□□ 2.71
CTU2-202ENST00000453996 UHRF1BP1LA0JNW5 1464 aa31.98■■■□□ 2.71
CTU2-202ENST00000453996 PLEKHD1A6NEE1 506 aa31.98■■■□□ 2.71
CTU2-202ENST00000453996 ZCCHC11Q5TAX3 1644 aaKnown RBP31.89■■■□□ 2.7
CTU2-202ENST00000453996 ABCC10Q5T3U5 1492 aa31.86■■■□□ 2.69
CTU2-202ENST00000453996 KDM5BQ9UGL1 1544 aa31.85■■■□□ 2.69
CTU2-202ENST00000453996 GPATCH8Q9UKJ3 1502 aaKnown RBP31.85■■■□□ 2.69
CTU2-202ENST00000453996 CDC42BPAQ5VT25 1732 aa31.84■■■□□ 2.69
CTU2-202ENST00000453996 SETD5Q9C0A6 1442 aa31.84■■■□□ 2.69
CTU2-202ENST00000453996 PTPRKQ15262 1439 aa31.81■■■□□ 2.68
CTU2-202ENST00000453996 RAB3GAP2Q9H2M9 1393 aa31.8■■■□□ 2.68
CTU2-202ENST00000453996 DNMT1P26358 1616 aaKnown RBP31.76■■■□□ 2.67
CTU2-202ENST00000453996 CAMSAP2Q08AD1 1489 aa31.75■■■□□ 2.67
CTU2-202ENST00000453996 CFDP1Q9UEE9 299 aaPredicted RBP31.75■■■□□ 2.67
CTU2-202ENST00000453996 DHX57Q6P158 1386 aaKnown RBP31.72■■■□□ 2.67
CTU2-202ENST00000453996 HFM1A2PYH4 1435 aa31.72■■■□□ 2.67
CTU2-202ENST00000453996 PREX2Q70Z35 1606 aa31.71■■■□□ 2.67
CTU2-202ENST00000453996 TTC37Q6PGP7 1564 aa31.69■■■□□ 2.66
CTU2-202ENST00000453996 DAPK1P53355 1430 aa31.69■■■□□ 2.66
CTU2-202ENST00000453996 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.68■■■□□ 2.66
CTU2-202ENST00000453996 ZNF644Q9H582 1327 aaPredicted RBP31.68■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms