RNA–Protein interactions for RNA: ENST00000450991.6

NECAP1-202, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 1 (best)

Gene NECAP1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-202ENST00000450991 ARHGAP35Q9NRY4 1499 aa12.97□□□□□ -0.33
NECAP1-202ENST00000450991 TRIM26Q12899 539 aaPredicted RBP12.96□□□□□ -0.34
NECAP1-202ENST00000450991 SLC24A1O60721 1099 aa12.95□□□□□ -0.34
NECAP1-202ENST00000450991 PPARGC1BQ86YN6 1023 aaKnown RBP12.95□□□□□ -0.34
NECAP1-202ENST00000450991 PCGF6Q9BYE7 350 aa12.95□□□□□ -0.34
NECAP1-202ENST00000450991 CHMP7Q8WUX9 453 aaPredicted RBP12.94□□□□□ -0.34
NECAP1-202ENST00000450991 P3H3Q8IVL6 736 aa12.93□□□□□ -0.34
NECAP1-202ENST00000450991 MAGI1Q96QZ7 1491 aaPredicted RBP12.93□□□□□ -0.34
NECAP1-202ENST00000450991 EFCAB5A4FU69 1503 aa12.91□□□□□ -0.34
NECAP1-202ENST00000450991 GRIN2AQ12879 1464 aa12.9□□□□□ -0.34
NECAP1-202ENST00000450991 SYNJ2O15056 1496 aa12.89□□□□□ -0.35
NECAP1-202ENST00000450991 SAMD9Q5K651 1589 aa12.89□□□□□ -0.35
NECAP1-202ENST00000450991 TTBK1Q5TCY1 1321 aaPredicted RBP12.89□□□□□ -0.35
NECAP1-202ENST00000450991 IQGAP2Q13576 1575 aa12.85□□□□□ -0.35
NECAP1-202ENST00000450991 FHOD3Q2V2M9 1422 aa12.85□□□□□ -0.35
NECAP1-202ENST00000450991 PCF11O94913 1555 aaKnown RBP12.82□□□□□ -0.36
NECAP1-202ENST00000450991 CEP170Q5SW79 1584 aa12.82□□□□□ -0.36
NECAP1-202ENST00000450991 CFAP43Q8NDM7 1665 aa12.81□□□□□ -0.36
NECAP1-202ENST00000450991 KIAA0586Q9BVV6 1533 aa12.81□□□□□ -0.36
NECAP1-202ENST00000450991 NUP160Q12769 1436 aa12.8□□□□□ -0.36
NECAP1-202ENST00000450991 MAP3K1Q13233 1512 aa12.79□□□□□ -0.36
NECAP1-202ENST00000450991 UGGT2Q9NYU1 1516 aa12.79□□□□□ -0.36
NECAP1-202ENST00000450991 AEBP2Q6ZN18 517 aaPredicted RBP12.79□□□□□ -0.36
NECAP1-202ENST00000450991 ATP1B4Q9UN42 357 aaPredicted RBP12.79□□□□□ -0.36
NECAP1-202ENST00000450991 TIAM1Q13009 1591 aa12.79□□□□□ -0.36
NECAP1-202ENST00000450991 LRRIQ1Q96JM4 1722 aa12.79□□□□□ -0.36
NECAP1-202ENST00000450991 APLP2Q06481 763 aa12.78□□□□□ -0.36
NECAP1-202ENST00000450991 CHD1O14646 1710 aa12.77□□□□□ -0.36
NECAP1-202ENST00000450991 FYCO1Q9BQS8 1478 aa12.77□□□□□ -0.37
NECAP1-202ENST00000450991 JPH4Q96JJ6 628 aa12.76□□□□□ -0.37
NECAP1-202ENST00000450991 FMN1Q68DA7 1419 aa12.74□□□□□ -0.37
NECAP1-202ENST00000450991 CASKIN1Q8WXD9 1431 aa12.74□□□□□ -0.37
NECAP1-202ENST00000450991 KIAA0556O60303 1618 aa12.73□□□□□ -0.37
NECAP1-202ENST00000450991 DISP1Q96F81 1524 aa12.73□□□□□ -0.37
NECAP1-202ENST00000450991 KANK4Q5T7N3 995 aaPredicted RBP12.72□□□□□ -0.37
NECAP1-202ENST00000450991 ARID3CA6NKF2 412 aa12.69□□□□□ -0.38
NECAP1-202ENST00000450991 LRRC9Q6ZRR7 1453 aa12.68□□□□□ -0.38
NECAP1-202ENST00000450991 PRG4Q92954 1404 aaPredicted RBP12.67□□□□□ -0.38
NECAP1-202ENST00000450991 HECW1Q76N89 1606 aa12.67□□□□□ -0.38
NECAP1-202ENST00000450991 CARMIL2Q6F5E8 1435 aa12.66□□□□□ -0.38
NECAP1-202ENST00000450991 HRCP23327 699 aa12.64□□□□□ -0.39
NECAP1-202ENST00000450991 SHROOM2Q13796 1616 aa12.63□□□□□ -0.39
NECAP1-202ENST00000450991 MYT1Q01538 1121 aa12.63□□□□□ -0.39
NECAP1-202ENST00000450991 RRBP1Q9P2E9 1410 aaKnown RBP12.63□□□□□ -0.39
NECAP1-202ENST00000450991 RAPGEF6Q8TEU7 1601 aa12.62□□□□□ -0.39
NECAP1-202ENST00000450991 CCDC18Q5T9S5 1454 aa12.62□□□□□ -0.39
NECAP1-202ENST00000450991 CLASP1Q7Z460 1538 aa12.61□□□□□ -0.39
NECAP1-202ENST00000450991 ERCC6L2Q5T890 1561 aa12.6□□□□□ -0.39
NECAP1-202ENST00000450991 PLB1Q6P1J6 1458 aa12.6□□□□□ -0.39
NECAP1-202ENST00000450991 OSCARQ8IYS5 282 aa12.6□□□□□ -0.39
NECAP1-202ENST00000450991 SUPT6HQ7KZ85 1726 aaKnown RBP12.59□□□□□ -0.39
NECAP1-202ENST00000450991 EPRSP07814 1512 aaKnown RBP12.59□□□□□ -0.39
NECAP1-202ENST00000450991 EHBP1L1Q8N3D4 1523 aa12.59□□□□□ -0.39
NECAP1-202ENST00000450991 PTPRGP23470 1445 aa12.58□□□□□ -0.4
NECAP1-202ENST00000450991 CDK13Q14004 1512 aaKnown RBP12.58□□□□□ -0.4
NECAP1-202ENST00000450991 MAGI3Q5TCQ9 1506 aa12.58□□□□□ -0.4
NECAP1-202ENST00000450991 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.57□□□□□ -0.4
NECAP1-202ENST00000450991 HNRNPUL2Q1KMD3 747 aaKnown RBP12.57□□□□□ -0.4
NECAP1-202ENST00000450991 MTUS2Q5JR59 1369 aa12.56□□□□□ -0.4
NECAP1-202ENST00000450991 NUP153P49790 1475 aaKnown RBP12.56□□□□□ -0.4
NECAP1-202ENST00000450991 PHLDB1Q86UU1 1377 aa12.55□□□□□ -0.4
NECAP1-202ENST00000450991 ABCA8O94911 1581 aa12.54□□□□□ -0.4
NECAP1-202ENST00000450991 ARHGEF11O15085 1522 aa12.54□□□□□ -0.4
NECAP1-202ENST00000450991 CCNB3Q8WWL7 1395 aa12.54□□□□□ -0.4
NECAP1-202ENST00000450991 NCOA2Q15596 1464 aa12.51□□□□□ -0.41
NECAP1-202ENST00000450991 UACAQ9BZF9 1416 aa12.49□□□□□ -0.41
NECAP1-202ENST00000450991 ADCY10Q96PN6 1610 aa12.48□□□□□ -0.41
NECAP1-202ENST00000450991 ATP10BO94823 1461 aa12.47□□□□□ -0.41
NECAP1-202ENST00000450991 FGD6Q6ZV73 1430 aa12.47□□□□□ -0.41
NECAP1-202ENST00000450991 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.47□□□□□ -0.41
NECAP1-202ENST00000450991 ITGAEP38570 1179 aa12.46□□□□□ -0.41
NECAP1-202ENST00000450991 CDK11AQ9UQ88 783 aaPredicted RBP12.46□□□□□ -0.41
NECAP1-202ENST00000450991 MYOM3Q5VTT5 1437 aa12.46□□□□□ -0.42
NECAP1-202ENST00000450991 FAM50AQ14320 339 aaKnown RBP12.46□□□□□ -0.42
NECAP1-202ENST00000450991 PTPN23Q9H3S7 1636 aa12.45□□□□□ -0.42
NECAP1-202ENST00000450991 ZEB1P37275 1124 aaPredicted RBP12.44□□□□□ -0.42
NECAP1-202ENST00000450991 PLEKHD1A6NEE1 506 aa12.43□□□□□ -0.42
NECAP1-202ENST00000450991 KIF14Q15058 1648 aa12.43□□□□□ -0.42
NECAP1-202ENST00000450991 PELP1Q8IZL8 1130 aaKnown RBP12.42□□□□□ -0.42
NECAP1-202ENST00000450991 ABCC2Q92887 1545 aa12.42□□□□□ -0.42
NECAP1-202ENST00000450991 TROQ12816 1431 aaPredicted RBP12.42□□□□□ -0.42
NECAP1-202ENST00000450991 ITSN2Q9NZM3 1697 aa12.42□□□□□ -0.42
NECAP1-202ENST00000450991 TCOF1Q13428 1488 aaKnown RBP12.41□□□□□ -0.42
NECAP1-202ENST00000450991 CCER1Q8TC90 406 aaPredicted RBP12.4□□□□□ -0.42
NECAP1-202ENST00000450991 CDC42BPAQ5VT25 1732 aa12.39□□□□□ -0.43
NECAP1-202ENST00000450991 MIA2Q96PC5 1412 aa12.38□□□□□ -0.43
NECAP1-202ENST00000450991 UHRF1BP1LA0JNW5 1464 aa12.37□□□□□ -0.43
NECAP1-202ENST00000450991 KCNH8Q96L42 1107 aa12.37□□□□□ -0.43
NECAP1-202ENST00000450991 ZCCHC11Q5TAX3 1644 aaKnown RBP12.36□□□□□ -0.43
NECAP1-202ENST00000450991 ZNF644Q9H582 1327 aaPredicted RBP12.34□□□□□ -0.43
NECAP1-202ENST00000450991 KDM5BQ9UGL1 1544 aa12.34□□□□□ -0.43
NECAP1-202ENST00000450991 CYB5RLQ6IPT4 315 aa12.34□□□□□ -0.43
NECAP1-202ENST00000450991 ABCC10Q5T3U5 1492 aa12.34□□□□□ -0.43
NECAP1-202ENST00000450991 GCC2Q8IWJ2 1684 aa12.34□□□□□ -0.43
NECAP1-202ENST00000450991 DNMT1P26358 1616 aaKnown RBP12.33□□□□□ -0.43
NECAP1-202ENST00000450991 PTPRKQ15262 1439 aa12.33□□□□□ -0.43
NECAP1-202ENST00000450991 SETD5Q9C0A6 1442 aa12.33□□□□□ -0.44
NECAP1-202ENST00000450991 ZNF777Q9ULD5 760 aaPredicted RBP12.33□□□□□ -0.44
NECAP1-202ENST00000450991 CFDP1Q9UEE9 299 aaPredicted RBP12.32□□□□□ -0.44
NECAP1-202ENST00000450991 GPATCH8Q9UKJ3 1502 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms