RNA–Protein interactions for RNA: ENST00000450554.6

U2AF2-202, Transcript of U2 small nuclear RNA auxiliary factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene U2AF2, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2-202ENST00000450554 IRX6P78412 446 aaPredicted RBP30.45■■■□□ 2.47
U2AF2-202ENST00000450554 PEG3Q9GZU2 1588 aa30.44■■■□□ 2.46
U2AF2-202ENST00000450554 SETD5Q9C0A6 1442 aa30.43■■■□□ 2.46
U2AF2-202ENST00000450554 FAM50AQ14320 339 aaKnown RBP30.39■■■□□ 2.45
U2AF2-202ENST00000450554 CDK11AQ9UQ88 783 aaPredicted RBP30.39■■■□□ 2.45
U2AF2-202ENST00000450554 ARHGAP35Q9NRY4 1499 aa30.36■■■□□ 2.45
U2AF2-202ENST00000450554 FANCIQ9NVI1 1328 aa30.36■■■□□ 2.45
U2AF2-202ENST00000450554 ATAD2BQ9ULI0 1458 aa30.34■■■□□ 2.45
U2AF2-202ENST00000450554 HNRNPUQ00839 825 aaKnown RBP eCLIP30.29■■■□□ 2.44
U2AF2-202ENST00000450554 BIVM-ERCC5R4GMW8 1640 aa30.25■■■□□ 2.43
U2AF2-202ENST00000450554 BICRAQ9NZM4 1560 aa30.23■■■□□ 2.43
U2AF2-202ENST00000450554 KIF27Q86VH2 1401 aa30.23■■■□□ 2.43
U2AF2-202ENST00000450554 PHLDB1Q86UU1 1377 aa30.21■■■□□ 2.43
U2AF2-202ENST00000450554 TIMELESSQ9UNS1 1208 aa30.21■■■□□ 2.43
U2AF2-202ENST00000450554 TIAM1Q13009 1591 aa30.15■■■□□ 2.42
U2AF2-202ENST00000450554 ATP1B4Q9UN42 357 aaPredicted RBP30.13■■■□□ 2.41
U2AF2-202ENST00000450554 TONSLQ96HA7 1378 aa30.1■■■□□ 2.41
U2AF2-202ENST00000450554 LRRC9Q6ZRR7 1453 aa30.09■■■□□ 2.41
U2AF2-202ENST00000450554 DEKP35659 375 aaKnown RBP30.09■■■□□ 2.41
U2AF2-202ENST00000450554 CUX1P39880 1505 aa30.08■■■□□ 2.41
U2AF2-202ENST00000450554 PPP4R2Q9NY27 417 aa30.01■■■□□ 2.39
U2AF2-202ENST00000450554 P3H3Q8IVL6 736 aa30.01■■■□□ 2.39
U2AF2-202ENST00000450554 MYT1LQ9UL68 1186 aa29.98■■■□□ 2.39
U2AF2-202ENST00000450554 B4GALNT3Q6L9W6 998 aa29.98■■■□□ 2.39
U2AF2-202ENST00000450554 MAP3K1Q13233 1512 aa29.97■■■□□ 2.39
U2AF2-202ENST00000450554 NBR1Q14596 966 aa29.94■■■□□ 2.38
U2AF2-202ENST00000450554 ERICH6BQ5W0A0 696 aa29.88■■■□□ 2.37
U2AF2-202ENST00000450554 CCDC184Q52MB2 194 aa29.86■■■□□ 2.37
U2AF2-202ENST00000450554 NOP58Q9Y2X3 529 aaKnown RBP29.84■■■□□ 2.37
U2AF2-202ENST00000450554 IGF1RP08069 1367 aa29.84■■■□□ 2.37
U2AF2-202ENST00000450554 FAM9BQ8IZU0 186 aa29.82■■■□□ 2.36
U2AF2-202ENST00000450554 PRKCSHP14314 528 aaPredicted RBP29.81■■■□□ 2.36
U2AF2-202ENST00000450554 WASHC2AQ641Q2 1341 aa29.81■■■□□ 2.36
U2AF2-202ENST00000450554 FHAD1B1AJZ9 1412 aa29.8■■■□□ 2.36
U2AF2-202ENST00000450554 PAK3O75914 559 aaPredicted RBP29.8■■■□□ 2.36
U2AF2-202ENST00000450554 CARMIL1Q5VZK9 1371 aa29.77■■■□□ 2.36
U2AF2-202ENST00000450554 CCDC18Q5T9S5 1454 aa29.77■■■□□ 2.36
U2AF2-202ENST00000450554 HSPA5P11021 654 aaKnown RBP29.77■■■□□ 2.36
U2AF2-202ENST00000450554 PCF11O94913 1555 aaKnown RBP29.77■■■□□ 2.36
U2AF2-202ENST00000450554 CFAP43Q8NDM7 1665 aa29.72■■■□□ 2.35
U2AF2-202ENST00000450554 UACAQ9BZF9 1416 aa29.69■■■□□ 2.34
U2AF2-202ENST00000450554 MRS2Q9HD23 443 aa29.69■■■□□ 2.34
U2AF2-202ENST00000450554 FHOD3Q2V2M9 1422 aa29.68■■■□□ 2.34
U2AF2-202ENST00000450554 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.63■■■□□ 2.338e-8■■■■■ 38.9
U2AF2-202ENST00000450554 FGD6Q6ZV73 1430 aa29.63■■■□□ 2.33
U2AF2-202ENST00000450554 PTPRKQ15262 1439 aa29.63■■■□□ 2.33
U2AF2-202ENST00000450554 EIF4G2P78344 907 aaKnown RBP eCLIP29.61■■■□□ 2.33
U2AF2-202ENST00000450554 ZBED9Q6R2W3 1325 aa29.61■■■□□ 2.33
U2AF2-202ENST00000450554 PRKRIP1Q9H875 184 aaPredicted RBP29.61■■■□□ 2.33
U2AF2-202ENST00000450554 KDM5BQ9UGL1 1544 aa29.59■■■□□ 2.33
U2AF2-202ENST00000450554 HFM1A2PYH4 1435 aa29.59■■■□□ 2.33
U2AF2-202ENST00000450554 AQRO60306 1485 aaKnown RBP eCLIP29.59■■■□□ 2.331e-9■■■■■ 39.5
U2AF2-202ENST00000450554 CNTLNQ9NXG0 1405 aa29.59■■■□□ 2.33
U2AF2-202ENST00000450554 ANO8Q9HCE9 1232 aaPredicted RBP29.58■■■□□ 2.33
U2AF2-202ENST00000450554 CFTRP13569 1480 aa29.57■■■□□ 2.32
U2AF2-202ENST00000450554 RTL5Q5HYW3 569 aaPredicted RBP29.56■■■□□ 2.32
U2AF2-202ENST00000450554 ANP32AP39687 249 aaKnown RBP29.55■■■□□ 2.32
U2AF2-202ENST00000450554 C11orf95C9JLR9 678 aaPredicted RBP29.55■■■□□ 2.32
U2AF2-202ENST00000450554 PTPN23Q9H3S7 1636 aa29.55■■■□□ 2.32
U2AF2-202ENST00000450554 FYCO1Q9BQS8 1478 aa29.52■■■□□ 2.32
U2AF2-202ENST00000450554 NAIPQ13075 1403 aa29.52■■■□□ 2.32
U2AF2-202ENST00000450554 CNGB1Q14028 1251 aaPredicted RBP29.51■■■□□ 2.31
U2AF2-202ENST00000450554 MTUS2Q5JR59 1369 aa29.5■■■□□ 2.31
U2AF2-202ENST00000450554 IPO9Q96P70 1041 aaKnown RBP29.5■■■□□ 2.31
U2AF2-202ENST00000450554 NCOA2Q15596 1464 aa29.5■■■□□ 2.31
U2AF2-202ENST00000450554 CCDC136Q96JN2 1154 aa29.5■■■□□ 2.31
U2AF2-202ENST00000450554 CASKIN1Q8WXD9 1431 aa29.48■■■□□ 2.31
U2AF2-202ENST00000450554 ZBTB47Q9UFB7 747 aaPredicted RBP29.48■■■□□ 2.31
U2AF2-202ENST00000450554 RRP7BPQ9NSQ0 103 aa29.48■■■□□ 2.31
U2AF2-202ENST00000450554 AKNAQ7Z591 1439 aa29.48■■■□□ 2.31
U2AF2-202ENST00000450554 FGD5Q6ZNL6 1462 aa29.47■■■□□ 2.31
U2AF2-202ENST00000450554 SENP3-EIF4A1A0A087X0R7 540 aa29.45■■■□□ 2.3
U2AF2-202ENST00000450554 CHIC2Q9UKJ5 165 aa29.45■■■□□ 2.3
U2AF2-202ENST00000450554 CCDC7Q96M83 1385 aa29.44■■■□□ 2.3
U2AF2-202ENST00000450554 FMN1Q68DA7 1419 aa29.44■■■□□ 2.3
U2AF2-202ENST00000450554 NCAPD3P42695 1498 aa29.43■■■□□ 2.3
U2AF2-202ENST00000450554 HMGXB3Q12766 1538 aa29.41■■■□□ 2.3
U2AF2-202ENST00000450554 SALL2Q9Y467 1007 aaPredicted RBP29.4■■■□□ 2.3
U2AF2-202ENST00000450554 L3MBTL2Q969R5 705 aa29.39■■■□□ 2.3
U2AF2-202ENST00000450554 IL27Q8NEV9 243 aa29.38■■■□□ 2.29
U2AF2-202ENST00000450554 RTN4Q9NQC3 1192 aaKnown RBP29.37■■■□□ 2.29
U2AF2-202ENST00000450554 NCOA1Q15788 1441 aa29.36■■■□□ 2.29
U2AF2-202ENST00000450554 FOXD1Q16676 465 aa29.36■■■□□ 2.29
U2AF2-202ENST00000450554 NPM2Q86SE8 214 aaKnown RBP29.33■■■□□ 2.29
U2AF2-202ENST00000450554 NUDCQ9Y266 331 aa29.31■■■□□ 2.28
U2AF2-202ENST00000450554 SMG6Q86US8 1419 aaKnown RBP29.31■■■□□ 2.28
U2AF2-202ENST00000450554 MYOM3Q5VTT5 1437 aa29.3■■■□□ 2.28
U2AF2-202ENST00000450554 KIF7Q2M1P5 1343 aa29.29■■■□□ 2.28
U2AF2-202ENST00000450554 EFCAB5A4FU69 1503 aa29.28■■■□□ 2.28
U2AF2-202ENST00000450554 DENND4BO75064 1496 aaPredicted RBP29.27■■■□□ 2.28
U2AF2-202ENST00000450554 POLR3GLQ9BT43 218 aa29.26■■■□□ 2.28
U2AF2-202ENST00000450554 NBPF8Q3BBV2 869 aa29.25■■■□□ 2.27
U2AF2-202ENST00000450554 MPHOSPH9Q99550 1183 aa29.25■■■□□ 2.27
U2AF2-202ENST00000450554 LAS1LQ9Y4W2 734 aaKnown RBP29.23■■■□□ 2.27
U2AF2-202ENST00000450554 SNAPC4Q5SXM2 1469 aa29.22■■■□□ 2.27
U2AF2-202ENST00000450554 RNF123Q5XPI4 1314 aa29.19■■■□□ 2.26
U2AF2-202ENST00000450554 NEFMP07197 916 aa29.16■■■□□ 2.26
U2AF2-202ENST00000450554 RAD54L2Q9Y4B4 1467 aa29.13■■■□□ 2.25
U2AF2-202ENST00000450554 KDM6BO15054 1643 aa29.13■■■□□ 2.25
U2AF2-202ENST00000450554 HECW1Q76N89 1606 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms