RNA–Protein interactions for RNA: ENST00000448704.5

COA1-212, Transcript of cytochrome c oxidase assembly factor 1 homolog, humanhuman

TSL 1 (best)

Gene COA1, Length 1,599 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA1-212ENST00000448704 MAGI1Q96QZ7 1491 aaPredicted RBP28.19■■■□□ 2.1
COA1-212ENST00000448704 TRIM26Q12899 539 aaPredicted RBP28.16■■■□□ 2.1
COA1-212ENST00000448704 PCGF6Q9BYE7 350 aa28.14■■■□□ 2.1
COA1-212ENST00000448704 PPARGC1BQ86YN6 1023 aaKnown RBP28.13■■■□□ 2.09
COA1-212ENST00000448704 EFCAB5A4FU69 1503 aa28.1■■■□□ 2.09
COA1-212ENST00000448704 SYNJ2O15056 1496 aa28.09■■■□□ 2.09
COA1-212ENST00000448704 GRIN2AQ12879 1464 aa28.09■■■□□ 2.09
COA1-212ENST00000448704 CHMP7Q8WUX9 453 aaPredicted RBP28.03■■■□□ 2.08
COA1-212ENST00000448704 IQGAP2Q13576 1575 aa28.01■■■□□ 2.07
COA1-212ENST00000448704 P3H3Q8IVL6 736 aa28■■■□□ 2.07
COA1-212ENST00000448704 SAMD9Q5K651 1589 aa28■■■□□ 2.07
COA1-212ENST00000448704 APLP2Q06481 763 aa27.99■■■□□ 2.07
COA1-212ENST00000448704 FHOD3Q2V2M9 1422 aa27.98■■■□□ 2.07
COA1-212ENST00000448704 KIAA0586Q9BVV6 1533 aa27.97■■■□□ 2.07
COA1-212ENST00000448704 FBLN2P98095 1184 aa27.94■■■□□ 2.06
COA1-212ENST00000448704 CEP170Q5SW79 1584 aa27.91■■■□□ 2.06
COA1-212ENST00000448704 NUP160Q12769 1436 aa27.9■■■□□ 2.06
COA1-212ENST00000448704 UGGT2Q9NYU1 1516 aa27.9■■■□□ 2.06
COA1-212ENST00000448704 TTBK1Q5TCY1 1321 aaPredicted RBP27.9■■■□□ 2.06
COA1-212ENST00000448704 FMN1Q68DA7 1419 aa27.86■■■□□ 2.05
COA1-212ENST00000448704 PCF11O94913 1555 aaKnown RBP27.83■■■□□ 2.04
COA1-212ENST00000448704 CASKIN1Q8WXD9 1431 aa27.81■■■□□ 2.04
COA1-212ENST00000448704 MAP3K1Q13233 1512 aa27.8■■■□□ 2.04
COA1-212ENST00000448704 FYCO1Q9BQS8 1478 aa27.79■■■□□ 2.04
COA1-212ENST00000448704 KANK4Q5T7N3 995 aaPredicted RBP27.77■■■□□ 2.04
COA1-212ENST00000448704 DISP1Q96F81 1524 aa27.76■■■□□ 2.03
COA1-212ENST00000448704 CHD1O14646 1710 aa27.75■■■□□ 2.03
COA1-212ENST00000448704 TIAM1Q13009 1591 aa27.74■■■□□ 2.03
COA1-212ENST00000448704 KIAA0556O60303 1618 aa27.73■■■□□ 2.03
COA1-212ENST00000448704 JPH4Q96JJ6 628 aa27.69■■■□□ 2.02
COA1-212ENST00000448704 ATP1B4Q9UN42 357 aaPredicted RBP27.69■■■□□ 2.02
COA1-212ENST00000448704 CFAP43Q8NDM7 1665 aa27.67■■■□□ 2.02
COA1-212ENST00000448704 LRRC9Q6ZRR7 1453 aa27.63■■■□□ 2.01
COA1-212ENST00000448704 CARMIL2Q6F5E8 1435 aa27.62■■■□□ 2.01
COA1-212ENST00000448704 HECW1Q76N89 1606 aa27.55■■■□□ 2
COA1-212ENST00000448704 LRRIQ1Q96JM4 1722 aa27.54■■■□□ 2
COA1-212ENST00000448704 PRG4Q92954 1404 aaPredicted RBP27.51■■□□□ 1.99
COA1-212ENST00000448704 CCDC18Q5T9S5 1454 aa27.51■■□□□ 1.99
COA1-212ENST00000448704 SHROOM2Q13796 1616 aa27.5■■□□□ 1.99
COA1-212ENST00000448704 CLASP1Q7Z460 1538 aa27.47■■□□□ 1.99
COA1-212ENST00000448704 EPRSP07814 1512 aaKnown RBP27.47■■□□□ 1.99
COA1-212ENST00000448704 RAPGEF6Q8TEU7 1601 aa27.46■■□□□ 1.99
COA1-212ENST00000448704 RRBP1Q9P2E9 1410 aaKnown RBP27.45■■□□□ 1.99
COA1-212ENST00000448704 MTUS2Q5JR59 1369 aa27.42■■□□□ 1.98
COA1-212ENST00000448704 NUP153P49790 1475 aaKnown RBP27.41■■□□□ 1.98
COA1-212ENST00000448704 PHLDB1Q86UU1 1377 aa27.39■■□□□ 1.98
COA1-212ENST00000448704 PLB1Q6P1J6 1458 aa27.39■■□□□ 1.97
COA1-212ENST00000448704 CDK13Q14004 1512 aaKnown RBP27.38■■□□□ 1.97
COA1-212ENST00000448704 EHBP1L1Q8N3D4 1523 aa27.38■■□□□ 1.97
COA1-212ENST00000448704 MAGI3Q5TCQ9 1506 aa27.36■■□□□ 1.97
COA1-212ENST00000448704 CCNB3Q8WWL7 1395 aa27.35■■□□□ 1.97
COA1-212ENST00000448704 PTPRGP23470 1445 aa27.35■■□□□ 1.97
COA1-212ENST00000448704 ABCA8O94911 1581 aa27.34■■□□□ 1.97
COA1-212ENST00000448704 HRCP23327 699 aa27.34■■□□□ 1.97
COA1-212ENST00000448704 ARID3CA6NKF2 412 aa27.32■■□□□ 1.96
COA1-212ENST00000448704 ERCC6L2Q5T890 1561 aa27.31■■□□□ 1.96
COA1-212ENST00000448704 HNRNPUL2Q1KMD3 747 aaKnown RBP27.31■■□□□ 1.96
COA1-212ENST00000448704 SUPT6HQ7KZ85 1726 aaKnown RBP27.28■■□□□ 1.96
COA1-212ENST00000448704 NCOA2Q15596 1464 aa27.28■■□□□ 1.96
COA1-212ENST00000448704 ARHGEF11O15085 1522 aa27.25■■□□□ 1.95
COA1-212ENST00000448704 CDK11AQ9UQ88 783 aaPredicted RBP27.22■■□□□ 1.95
COA1-212ENST00000448704 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.22■■□□□ 1.95
COA1-212ENST00000448704 OSCARQ8IYS5 282 aa27.21■■□□□ 1.95
COA1-212ENST00000448704 UACAQ9BZF9 1416 aa27.19■■□□□ 1.94
COA1-212ENST00000448704 FGD6Q6ZV73 1430 aa27.18■■□□□ 1.94
COA1-212ENST00000448704 ATP10BO94823 1461 aa27.18■■□□□ 1.94
COA1-212ENST00000448704 MYOM3Q5VTT5 1437 aa27.18■■□□□ 1.94
COA1-212ENST00000448704 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.17■■□□□ 1.94
COA1-212ENST00000448704 TROQ12816 1431 aaPredicted RBP27.15■■□□□ 1.94
COA1-212ENST00000448704 FAM50AQ14320 339 aaKnown RBP27.14■■□□□ 1.93
COA1-212ENST00000448704 ABCC2Q92887 1545 aa27.09■■□□□ 1.93
COA1-212ENST00000448704 PLEKHD1A6NEE1 506 aa27.07■■□□□ 1.92
COA1-212ENST00000448704 ITGAEP38570 1179 aa27.07■■□□□ 1.92
COA1-212ENST00000448704 ADCY10Q96PN6 1610 aa27.05■■□□□ 1.92
COA1-212ENST00000448704 UHRF1BP1LA0JNW5 1464 aa27.05■■□□□ 1.92
COA1-212ENST00000448704 MIA2Q96PC5 1412 aa27.04■■□□□ 1.92
COA1-212ENST00000448704 PTPN23Q9H3S7 1636 aa27.03■■□□□ 1.92
COA1-212ENST00000448704 ZEB1P37275 1124 aaPredicted RBP27.02■■□□□ 1.92
COA1-212ENST00000448704 CCER1Q8TC90 406 aaPredicted RBP27.02■■□□□ 1.92
COA1-212ENST00000448704 TCOF1Q13428 1488 aaKnown RBP27.02■■□□□ 1.92
COA1-212ENST00000448704 KIF14Q15058 1648 aa26.99■■□□□ 1.91
COA1-212ENST00000448704 KDM5BQ9UGL1 1544 aa26.93■■□□□ 1.9
COA1-212ENST00000448704 ABCC10Q5T3U5 1492 aa26.93■■□□□ 1.9
COA1-212ENST00000448704 GPATCH8Q9UKJ3 1502 aaKnown RBP26.92■■□□□ 1.9
COA1-212ENST00000448704 ZCCHC11Q5TAX3 1644 aaKnown RBP26.89■■□□□ 1.89
COA1-212ENST00000448704 PTPRKQ15262 1439 aa26.89■■□□□ 1.89
COA1-212ENST00000448704 ITSN2Q9NZM3 1697 aa26.89■■□□□ 1.89
COA1-212ENST00000448704 SETD5Q9C0A6 1442 aa26.87■■□□□ 1.89
COA1-212ENST00000448704 CFDP1Q9UEE9 299 aaPredicted RBP26.84■■□□□ 1.89
COA1-212ENST00000448704 RAB3GAP2Q9H2M9 1393 aa26.84■■□□□ 1.89
COA1-212ENST00000448704 ZNF644Q9H582 1327 aaPredicted RBP26.8■■□□□ 1.88
COA1-212ENST00000448704 CDC42BPAQ5VT25 1732 aa26.8■■□□□ 1.88
COA1-212ENST00000448704 CAMSAP2Q08AD1 1489 aa26.78■■□□□ 1.88
COA1-212ENST00000448704 DHX57Q6P158 1386 aaKnown RBP26.78■■□□□ 1.88
COA1-212ENST00000448704 HFM1A2PYH4 1435 aa26.76■■□□□ 1.87
COA1-212ENST00000448704 DAPK1P53355 1430 aa26.75■■□□□ 1.87
COA1-212ENST00000448704 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.75■■□□□ 1.87
COA1-212ENST00000448704 DNMT1P26358 1616 aaKnown RBP26.74■■□□□ 1.87
COA1-212ENST00000448704 ABCC5O15440 1437 aa26.73■■□□□ 1.87
COA1-212ENST00000448704 ZNF777Q9ULD5 760 aaPredicted RBP26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms