RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 SYNJ2O15056 1496 aa39.54■■■■□ 3.92
RFFL-206ENST00000447669 GRIN2AQ12879 1464 aa39.52■■■■□ 3.92
RFFL-206ENST00000447669 ARHGAP35Q9NRY4 1499 aa39.42■■■■□ 3.9
RFFL-206ENST00000447669 P3H3Q8IVL6 736 aa39.38■■■■□ 3.9
RFFL-206ENST00000447669 ARAP1Q96P48 1450 aa39.36■■■■□ 3.89
RFFL-206ENST00000447669 CEP170Q5SW79 1584 aa39.34■■■■□ 3.89
RFFL-206ENST00000447669 CHD1O14646 1710 aa39.33■■■■□ 3.89
RFFL-206ENST00000447669 IQGAP2Q13576 1575 aa39.28■■■■□ 3.88
RFFL-206ENST00000447669 PPARGC1BQ86YN6 1023 aaKnown RBP39.23■■■■□ 3.87
RFFL-206ENST00000447669 KIAA0586Q9BVV6 1533 aa39.23■■■■□ 3.87
RFFL-206ENST00000447669 NUP160Q12769 1436 aa39.23■■■■□ 3.87
RFFL-206ENST00000447669 VPS8Q8N3P4 1428 aa39.21■■■■□ 3.87
RFFL-206ENST00000447669 FHOD3Q2V2M9 1422 aa39.18■■■■□ 3.86
RFFL-206ENST00000447669 SAMD9Q5K651 1589 aa39.11■■■■□ 3.85
RFFL-206ENST00000447669 EFCAB5A4FU69 1503 aa39.11■■■■□ 3.85
RFFL-206ENST00000447669 UGGT2Q9NYU1 1516 aa39.04■■■■□ 3.84
RFFL-206ENST00000447669 JPH4Q96JJ6 628 aa39.02■■■■□ 3.84
RFFL-206ENST00000447669 TTBK1Q5TCY1 1321 aaPredicted RBP39.01■■■■□ 3.83
RFFL-206ENST00000447669 DISP1Q96F81 1524 aa38.97■■■■□ 3.83
RFFL-206ENST00000447669 KIAA0556O60303 1618 aa38.9■■■■□ 3.82
RFFL-206ENST00000447669 ATP1B4Q9UN42 357 aaPredicted RBP38.88■■■■□ 3.81
RFFL-206ENST00000447669 PCF11O94913 1555 aaKnown RBP38.85■■■■□ 3.81
RFFL-206ENST00000447669 APLP2Q06481 763 aa38.82■■■■□ 3.81
RFFL-206ENST00000447669 FMN1Q68DA7 1419 aa38.8■■■■□ 3.8
RFFL-206ENST00000447669 PRG4Q92954 1404 aaPredicted RBP38.79■■■■□ 3.8
RFFL-206ENST00000447669 CLASP1Q7Z460 1538 aa38.79■■■■□ 3.8
RFFL-206ENST00000447669 CARMIL2Q6F5E8 1435 aa38.73■■■■□ 3.79
RFFL-206ENST00000447669 SHROOM2Q13796 1616 aa38.72■■■■□ 3.79
RFFL-206ENST00000447669 CASKIN1Q8WXD9 1431 aa38.72■■■■□ 3.79
RFFL-206ENST00000447669 KANK4Q5T7N3 995 aaPredicted RBP38.71■■■■□ 3.79
RFFL-206ENST00000447669 ERCC6L2Q5T890 1561 aa38.7■■■■□ 3.79
RFFL-206ENST00000447669 OSCARQ8IYS5 282 aa38.67■■■■□ 3.78
RFFL-206ENST00000447669 FYCO1Q9BQS8 1478 aa38.67■■■■□ 3.78
RFFL-206ENST00000447669 LRRIQ1Q96JM4 1722 aa38.62■■■■□ 3.77
RFFL-206ENST00000447669 PCGF6Q9BYE7 350 aa38.62■■■■□ 3.77
RFFL-206ENST00000447669 ARID3CA6NKF2 412 aa38.62■■■■□ 3.77
RFFL-206ENST00000447669 TIAM1Q13009 1591 aa38.58■■■■□ 3.77
RFFL-206ENST00000447669 TRIM26Q12899 539 aaPredicted RBP38.56■■■■□ 3.76
RFFL-206ENST00000447669 PLB1Q6P1J6 1458 aa38.54■■■■□ 3.76
RFFL-206ENST00000447669 CFAP43Q8NDM7 1665 aa38.49■■■■□ 3.75
RFFL-206ENST00000447669 PTPRGP23470 1445 aa38.48■■■■□ 3.75
RFFL-206ENST00000447669 RAPGEF6Q8TEU7 1601 aa38.47■■■■□ 3.75
RFFL-206ENST00000447669 MAP3K1Q13233 1512 aa38.46■■■■□ 3.75
RFFL-206ENST00000447669 HECW1Q76N89 1606 aa38.46■■■■□ 3.75
RFFL-206ENST00000447669 CDK13Q14004 1512 aaKnown RBP38.42■■■■□ 3.74
RFFL-206ENST00000447669 LRRC9Q6ZRR7 1453 aa38.42■■■■□ 3.74
RFFL-206ENST00000447669 NUP153P49790 1475 aaKnown RBP38.41■■■■□ 3.74
RFFL-206ENST00000447669 EPRSP07814 1512 aaKnown RBP38.4■■■■□ 3.74
RFFL-206ENST00000447669 ABCA8O94911 1581 aa38.35■■■■□ 3.73
RFFL-206ENST00000447669 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.31■■■■□ 3.72
RFFL-206ENST00000447669 HNRNPUL2Q1KMD3 747 aaKnown RBP38.31■■■■□ 3.72
RFFL-206ENST00000447669 CCDC18Q5T9S5 1454 aa38.3■■■■□ 3.72
RFFL-206ENST00000447669 MAGI3Q5TCQ9 1506 aa38.29■■■■□ 3.72
RFFL-206ENST00000447669 MTUS2Q5JR59 1369 aa38.26■■■■□ 3.72
RFFL-206ENST00000447669 UACAQ9BZF9 1416 aa38.22■■■■□ 3.71
RFFL-206ENST00000447669 ATP10BO94823 1461 aa38.16■■■■□ 3.7
RFFL-206ENST00000447669 PHLDB1Q86UU1 1377 aa38.14■■■■□ 3.7
RFFL-206ENST00000447669 EHBP1L1Q8N3D4 1523 aa38.1■■■■□ 3.69
RFFL-206ENST00000447669 ABCC2Q92887 1545 aa38.09■■■■□ 3.69
RFFL-206ENST00000447669 NCOA2Q15596 1464 aa38.03■■■■□ 3.68
RFFL-206ENST00000447669 ARHGEF11O15085 1522 aa38.03■■■■□ 3.68
RFFL-206ENST00000447669 SUPT6HQ7KZ85 1726 aaKnown RBP38.02■■■■□ 3.68
RFFL-206ENST00000447669 CDK11AQ9UQ88 783 aaPredicted RBP38.02■■■■□ 3.68
RFFL-206ENST00000447669 ADCY10Q96PN6 1610 aa37.98■■■■□ 3.67
RFFL-206ENST00000447669 UHRF1BP1LA0JNW5 1464 aa37.95■■■■□ 3.67
RFFL-206ENST00000447669 PLEKHD1A6NEE1 506 aa37.95■■■■□ 3.67
RFFL-206ENST00000447669 RRBP1Q9P2E9 1410 aaKnown RBP37.95■■■■□ 3.67
RFFL-206ENST00000447669 TROQ12816 1431 aaPredicted RBP37.94■■■■□ 3.66
RFFL-206ENST00000447669 CCNB3Q8WWL7 1395 aa37.91■■■■□ 3.66
RFFL-206ENST00000447669 ZCCHC11Q5TAX3 1644 aaKnown RBP37.9■■■■□ 3.66
RFFL-206ENST00000447669 KIF14Q15058 1648 aa37.89■■■■□ 3.66
RFFL-206ENST00000447669 RIMBP3CA6NJZ7 1639 aa37.89■■■■□ 3.66
RFFL-206ENST00000447669 RIMBP3BA6NNM3 1639 aa37.89■■■■□ 3.66
RFFL-206ENST00000447669 RIMBP3Q9UFD9 1639 aa37.89■■■■□ 3.66
RFFL-206ENST00000447669 KDM5BQ9UGL1 1544 aa37.86■■■■□ 3.65
RFFL-206ENST00000447669 FAM50AQ14320 339 aaKnown RBP37.83■■■■□ 3.65
RFFL-206ENST00000447669 MYOM3Q5VTT5 1437 aa37.82■■■■□ 3.65
RFFL-206ENST00000447669 CYB5RLQ6IPT4 315 aa37.82■■■■□ 3.65
RFFL-206ENST00000447669 ITGAEP38570 1179 aa37.82■■■■□ 3.64
RFFL-206ENST00000447669 FGD6Q6ZV73 1430 aa37.8■■■■□ 3.64
RFFL-206ENST00000447669 KCNH8Q96L42 1107 aa37.75■■■■□ 3.63
RFFL-206ENST00000447669 ABCC10Q5T3U5 1492 aa37.66■■■■□ 3.62
RFFL-206ENST00000447669 PTPN23Q9H3S7 1636 aa37.65■■■■□ 3.62
RFFL-206ENST00000447669 GPATCH8Q9UKJ3 1502 aaKnown RBP37.63■■■■□ 3.61
RFFL-206ENST00000447669 ZNF644Q9H582 1327 aaPredicted RBP37.62■■■■□ 3.61
RFFL-206ENST00000447669 NPM1P06748 294 aaKnown RBP eCLIP37.61■■■■□ 3.61
RFFL-206ENST00000447669 CDC42BPAQ5VT25 1732 aa37.59■■■■□ 3.61
RFFL-206ENST00000447669 TTC37Q6PGP7 1564 aa37.57■■■■□ 3.6
RFFL-206ENST00000447669 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.57■■■■□ 3.6
RFFL-206ENST00000447669 ASXL2Q76L83 1435 aa37.56■■■■□ 3.6
RFFL-206ENST00000447669 CFDP1Q9UEE9 299 aaPredicted RBP37.56■■■■□ 3.6
RFFL-206ENST00000447669 MIA2Q96PC5 1412 aa37.56■■■■□ 3.6
RFFL-206ENST00000447669 ZNF777Q9ULD5 760 aaPredicted RBP37.55■■■■□ 3.6
RFFL-206ENST00000447669 WDR7Q9Y4E6 1490 aa37.54■■■■□ 3.6
RFFL-206ENST00000447669 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.52■■■■□ 3.6
RFFL-206ENST00000447669 ITSN2Q9NZM3 1697 aa37.52■■■■□ 3.6
RFFL-206ENST00000447669 TCOF1Q13428 1488 aaKnown RBP37.52■■■■□ 3.6
RFFL-206ENST00000447669 PTPRKQ15262 1439 aa37.47■■■■□ 3.59
RFFL-206ENST00000447669 CDC42BPBQ9Y5S2 1711 aa37.45■■■■□ 3.59
RFFL-206ENST00000447669 CAMSAP2Q08AD1 1489 aa37.41■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms