RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 PRXQ9BXM0 1461 aa36.68■■■■□ 3.46
APOE-204ENST00000446996 KIAA0586Q9BVV6 1533 aa36.64■■■■□ 3.46
APOE-204ENST00000446996 SHROOM2Q13796 1616 aa36.61■■■■□ 3.45
APOE-204ENST00000446996 JPH4Q96JJ6 628 aa36.54■■■■□ 3.44
APOE-204ENST00000446996 FAM9AQ8IZU1 332 aaPredicted RBP36.47■■■■□ 3.43
APOE-204ENST00000446996 IQGAP2Q13576 1575 aa36.42■■■■□ 3.42
APOE-204ENST00000446996 ARAP1Q96P48 1450 aa36.41■■■■□ 3.42
APOE-204ENST00000446996 PRG4Q92954 1404 aaPredicted RBP36.41■■■■□ 3.42
APOE-204ENST00000446996 KIF21BO75037 1637 aa36.38■■■■□ 3.41
APOE-204ENST00000446996 CTTNBP2Q8WZ74 1663 aa36.38■■■■□ 3.41
APOE-204ENST00000446996 ERCC6L2Q5T890 1561 aa36.36■■■■□ 3.41
APOE-204ENST00000446996 CYB5RLQ6IPT4 315 aa36.32■■■■□ 3.4
APOE-204ENST00000446996 UGGT2Q9NYU1 1516 aa36.27■■■■□ 3.4
APOE-204ENST00000446996 CARMIL2Q6F5E8 1435 aa36.24■■■■□ 3.39
APOE-204ENST00000446996 GOLGA3Q08378 1498 aa36.16■■■■□ 3.38
APOE-204ENST00000446996 DISP1Q96F81 1524 aa36.14■■■■□ 3.38
APOE-204ENST00000446996 TNIKQ9UKE5 1360 aa36.1■■■■□ 3.37
APOE-204ENST00000446996 KIAA0556O60303 1618 aa36.07■■■■□ 3.36
APOE-204ENST00000446996 PTPRGP23470 1445 aa36.03■■■■□ 3.36
APOE-204ENST00000446996 UBTFP17480 764 aaKnown RBP36.01■■■■□ 3.36
APOE-204ENST00000446996 SAMD9Q5K651 1589 aa35.93■■■■□ 3.34
APOE-204ENST00000446996 EHMT2Q96KQ7 1210 aa35.87■■■■□ 3.33
APOE-204ENST00000446996 EFCAB5A4FU69 1503 aa35.84■■■■□ 3.33
APOE-204ENST00000446996 UHRF1BP1LA0JNW5 1464 aa35.81■■■■□ 3.32
APOE-204ENST00000446996 ADCY10Q96PN6 1610 aa35.81■■■■□ 3.32
APOE-204ENST00000446996 UACAQ9BZF9 1416 aa35.81■■■■□ 3.32
APOE-204ENST00000446996 TTBK1Q5TCY1 1321 aaPredicted RBP35.78■■■■□ 3.32
APOE-204ENST00000446996 NPM1P06748 294 aaKnown RBP eCLIP35.75■■■■□ 3.31
APOE-204ENST00000446996 P3H3Q8IVL6 736 aa35.74■■■■□ 3.31
APOE-204ENST00000446996 ABCC2Q92887 1545 aa35.73■■■■□ 3.31
APOE-204ENST00000446996 RANGAP1P46060 587 aaPredicted RBP35.72■■■■□ 3.31
APOE-204ENST00000446996 TRHP20396 242 aaPredicted RBP35.68■■■■□ 3.3
APOE-204ENST00000446996 ABCA8O94911 1581 aa35.68■■■■□ 3.3
APOE-204ENST00000446996 PLB1Q6P1J6 1458 aa35.64■■■■□ 3.3
APOE-204ENST00000446996 ARHGAP35Q9NRY4 1499 aa35.64■■■■□ 3.3
APOE-204ENST00000446996 FHOD3Q2V2M9 1422 aa35.64■■■■□ 3.3
APOE-204ENST00000446996 MAPKBP1O60336 1514 aa35.62■■■■□ 3.29
APOE-204ENST00000446996 KDM5BQ9UGL1 1544 aa35.61■■■■□ 3.29
APOE-204ENST00000446996 RAPGEF6Q8TEU7 1601 aa35.53■■■■□ 3.28
APOE-204ENST00000446996 FMN1Q68DA7 1419 aa35.51■■■■□ 3.28
APOE-204ENST00000446996 CLIP1P30622 1438 aa35.49■■■■□ 3.27
APOE-204ENST00000446996 ZCCHC11Q5TAX3 1644 aaKnown RBP35.48■■■■□ 3.27
APOE-204ENST00000446996 LOC105371045A0A1W2PR82 267 aa35.48■■■■□ 3.27
APOE-204ENST00000446996 ABCC10Q5T3U5 1492 aa35.41■■■■□ 3.26
APOE-204ENST00000446996 ASXL2Q76L83 1435 aa35.4■■■■□ 3.26
APOE-204ENST00000446996 ATP10BO94823 1461 aa35.38■■■■□ 3.25
APOE-204ENST00000446996 CEP162Q5TB80 1403 aa35.38■■■■□ 3.25
APOE-204ENST00000446996 NUP153P49790 1475 aaKnown RBP35.37■■■■□ 3.25
APOE-204ENST00000446996 KIF13AQ9H1H9 1805 aa35.34■■■■□ 3.25
APOE-204ENST00000446996 DIP2BQ9P265 1576 aa35.32■■■■□ 3.24
APOE-204ENST00000446996 WDR7Q9Y4E6 1490 aa35.28■■■■□ 3.24
APOE-204ENST00000446996 HECW1Q76N89 1606 aa35.28■■■■□ 3.24
APOE-204ENST00000446996 FAM69CQ0P6D2 419 aa35.27■■■■□ 3.24
APOE-204ENST00000446996 GLI2P10070 1586 aa35.25■■■■□ 3.23
APOE-204ENST00000446996 CASKIN1Q8WXD9 1431 aa35.23■■■■□ 3.23
APOE-204ENST00000446996 EPRSP07814 1512 aaKnown RBP35.22■■■■□ 3.23
APOE-204ENST00000446996 ARID3CA6NKF2 412 aa35.2■■■■□ 3.23
APOE-204ENST00000446996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.18■■■■□ 3.22
APOE-204ENST00000446996 HNRNPUL2Q1KMD3 747 aaKnown RBP35.18■■■■□ 3.22
APOE-204ENST00000446996 FYCO1Q9BQS8 1478 aa35.15■■■■□ 3.22
APOE-204ENST00000446996 PCF11O94913 1555 aaKnown RBP35.14■■■■□ 3.22
APOE-204ENST00000446996 PLEKHD1A6NEE1 506 aa35.13■■■■□ 3.21
APOE-204ENST00000446996 ATP1B4Q9UN42 357 aaPredicted RBP35.13■■■■□ 3.21
APOE-204ENST00000446996 CDK13Q14004 1512 aaKnown RBP35.09■■■■□ 3.21
APOE-204ENST00000446996 CCDC18Q5T9S5 1454 aa35.09■■■■□ 3.21
APOE-204ENST00000446996 KCNH8Q96L42 1107 aa35.07■■■■□ 3.2
APOE-204ENST00000446996 CDK11AQ9UQ88 783 aaPredicted RBP35.07■■■■□ 3.2
APOE-204ENST00000446996 LRRIQ1Q96JM4 1722 aa35.06■■■■□ 3.2
APOE-204ENST00000446996 MAP3K4Q9Y6R4 1608 aa35.04■■■■□ 3.2
APOE-204ENST00000446996 CFAP43Q8NDM7 1665 aa35.02■■■■□ 3.2
APOE-204ENST00000446996 VPS8Q8N3P4 1428 aa34.98■■■■□ 3.19
APOE-204ENST00000446996 TSPOAP1O95153 1857 aa34.97■■■■□ 3.19
APOE-204ENST00000446996 ABCA9Q8IUA7 1624 aa34.97■■■■□ 3.19
APOE-204ENST00000446996 CD109Q6YHK3 1445 aa34.94■■■■□ 3.18
APOE-204ENST00000446996 PPRC1Q5VV67 1664 aaKnown RBP34.92■■■■□ 3.18
APOE-204ENST00000446996 TROQ12816 1431 aaPredicted RBP34.91■■■■□ 3.18
APOE-204ENST00000446996 MAGI3Q5TCQ9 1506 aa34.91■■■■□ 3.18
APOE-204ENST00000446996 TEX14Q8IWB6 1497 aa34.9■■■■□ 3.18
APOE-204ENST00000446996 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.83■■■■□ 3.176e-6■■■■□ 21.5
APOE-204ENST00000446996 KIF14Q15058 1648 aa34.79■■■■□ 3.16
APOE-204ENST00000446996 PHLDB1Q86UU1 1377 aa34.74■■■■□ 3.15
APOE-204ENST00000446996 MAP3K1Q13233 1512 aa34.74■■■■□ 3.15
APOE-204ENST00000446996 TTC37Q6PGP7 1564 aa34.74■■■■□ 3.15
APOE-204ENST00000446996 MTUS2Q5JR59 1369 aa34.7■■■■□ 3.15
APOE-204ENST00000446996 TIAM1Q13009 1591 aa34.7■■■■□ 3.14
APOE-204ENST00000446996 KDM6BO15054 1643 aa34.69■■■■□ 3.14
APOE-204ENST00000446996 PLCH2O75038 1416 aa34.68■■■■□ 3.14
APOE-204ENST00000446996 NEO1Q92859 1461 aa34.68■■■■□ 3.14
APOE-204ENST00000446996 ARAP3Q8WWN8 1544 aa34.67■■■■□ 3.14
APOE-204ENST00000446996 EHBP1L1Q8N3D4 1523 aa34.66■■■■□ 3.14
APOE-204ENST00000446996 MYO5CQ9NQX4 1742 aa34.65■■■■□ 3.14
APOE-204ENST00000446996 CFAP74Q9C0B2 1584 aa34.62■■■■□ 3.13
APOE-204ENST00000446996 APLP2Q06481 763 aa34.58■■■■□ 3.13
APOE-204ENST00000446996 FANCAO15360 1455 aa34.58■■■■□ 3.13
APOE-204ENST00000446996 COL17A1Q9UMD9 1497 aaPredicted RBP34.56■■■■□ 3.12
APOE-204ENST00000446996 LRRC9Q6ZRR7 1453 aa34.55■■■■□ 3.12
APOE-204ENST00000446996 EFCAB2Q5VUJ9 269 aa34.55■■■■□ 3.12
APOE-204ENST00000446996 AKNAQ7Z591 1439 aa34.54■■■■□ 3.12
APOE-204ENST00000446996 PREX2Q70Z35 1606 aa34.52■■■■□ 3.12
APOE-204ENST00000446996 CDC42BPAQ5VT25 1732 aa34.51■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms