RNA–Protein interactions for RNA: ENST00000441708.1

CTNNB1-208, Transcript of catenin beta 1, humanhuman

TSL 4

Gene CTNNB1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-208ENST00000441708 DIP2BQ9P265 1576 aa16.64■□□□□ 0.25
CTNNB1-208ENST00000441708 SUPT5HO00267 1087 aaKnown RBP16.63■□□□□ 0.25
CTNNB1-208ENST00000441708 PRG4Q92954 1404 aaPredicted RBP16.62■□□□□ 0.25
CTNNB1-208ENST00000441708 MAPKBP1O60336 1514 aa16.59■□□□□ 0.25
CTNNB1-208ENST00000441708 CUL7Q14999 1698 aa16.58■□□□□ 0.24
CTNNB1-208ENST00000441708 KDM6BO15054 1643 aa16.56■□□□□ 0.24
CTNNB1-208ENST00000441708 ABCC10Q5T3U5 1492 aa16.54■□□□□ 0.24
CTNNB1-208ENST00000441708 PPRC1Q5VV67 1664 aaKnown RBP16.52■□□□□ 0.23
CTNNB1-208ENST00000441708 JPH4Q96JJ6 628 aa16.51■□□□□ 0.23
CTNNB1-208ENST00000441708 FAM69CQ0P6D2 419 aa16.44■□□□□ 0.22
CTNNB1-208ENST00000441708 KIAA0586Q9BVV6 1533 aa16.44■□□□□ 0.22
CTNNB1-208ENST00000441708 NPM1P06748 294 aaKnown RBP eCLIP16.38■□□□□ 0.21
CTNNB1-208ENST00000441708 IQGAP2Q13576 1575 aa16.38■□□□□ 0.21
CTNNB1-208ENST00000441708 MAP3K4Q9Y6R4 1608 aa16.35■□□□□ 0.21
CTNNB1-208ENST00000441708 CTTNBP2Q8WZ74 1663 aa16.35■□□□□ 0.21
CTNNB1-208ENST00000441708 IGF1RP08069 1367 aa16.35■□□□□ 0.21
CTNNB1-208ENST00000441708 KIF27Q86VH2 1401 aa16.35■□□□□ 0.21
CTNNB1-208ENST00000441708 ZCCHC11Q5TAX3 1644 aaKnown RBP16.34■□□□□ 0.21
CTNNB1-208ENST00000441708 GLI2P10070 1586 aa16.34■□□□□ 0.21
CTNNB1-208ENST00000441708 ABCC2Q92887 1545 aa16.33■□□□□ 0.2
CTNNB1-208ENST00000441708 KDM4FA0A1W2PPD8 638 aa16.32■□□□□ 0.2
CTNNB1-208ENST00000441708 PTPRGP23470 1445 aa16.28■□□□□ 0.2
CTNNB1-208ENST00000441708 ASXL2Q76L83 1435 aa16.27■□□□□ 0.19
CTNNB1-208ENST00000441708 DISP1Q96F81 1524 aa16.26■□□□□ 0.19
CTNNB1-208ENST00000441708 KIAA0556O60303 1618 aa16.26■□□□□ 0.19
CTNNB1-208ENST00000441708 TTBK1Q5TCY1 1321 aaPredicted RBP16.25■□□□□ 0.19
CTNNB1-208ENST00000441708 CARMIL1Q5VZK9 1371 aa16.25■□□□□ 0.19
CTNNB1-208ENST00000441708 TNIKQ9UKE5 1360 aa16.25■□□□□ 0.19
CTNNB1-208ENST00000441708 UHRF1BP1LA0JNW5 1464 aa16.24■□□□□ 0.19
CTNNB1-208ENST00000441708 CARMIL2Q6F5E8 1435 aa16.24■□□□□ 0.19
CTNNB1-208ENST00000441708 ADGRL1O94910 1474 aa16.23■□□□□ 0.19
CTNNB1-208ENST00000441708 PLB1Q6P1J6 1458 aa16.23■□□□□ 0.19
CTNNB1-208ENST00000441708 CFAP43Q8NDM7 1665 aa16.21■□□□□ 0.18
CTNNB1-208ENST00000441708 UGGT2Q9NYU1 1516 aa16.2■□□□□ 0.18
CTNNB1-208ENST00000441708 EPRSP07814 1512 aaKnown RBP16.19■□□□□ 0.18
CTNNB1-208ENST00000441708 KDM5BQ9UGL1 1544 aa16.19■□□□□ 0.18
CTNNB1-208ENST00000441708 UACAQ9BZF9 1416 aa16.19■□□□□ 0.18
CTNNB1-208ENST00000441708 COL17A1Q9UMD9 1497 aaPredicted RBP16.18■□□□□ 0.18
CTNNB1-208ENST00000441708 HECW2Q9P2P5 1572 aa16.17■□□□□ 0.18
CTNNB1-208ENST00000441708 KIF21BO75037 1637 aa16.15■□□□□ 0.18
CTNNB1-208ENST00000441708 RAPGEF2Q9Y4G8 1499 aa16.13■□□□□ 0.17
CTNNB1-208ENST00000441708 TEX14Q8IWB6 1497 aa16.12■□□□□ 0.17
CTNNB1-208ENST00000441708 WDR7Q9Y4E6 1490 aa16.09■□□□□ 0.17
CTNNB1-208ENST00000441708 ABCA8O94911 1581 aa16.09■□□□□ 0.17
CTNNB1-208ENST00000441708 ILDR1Q86SU0 546 aaPredicted RBP16.08■□□□□ 0.16
CTNNB1-208ENST00000441708 MAGI3Q5TCQ9 1506 aa16.01■□□□□ 0.15
CTNNB1-208ENST00000441708 ABCA9Q8IUA7 1624 aa15.97■□□□□ 0.15
CTNNB1-208ENST00000441708 GOLGA3Q08378 1498 aa15.97■□□□□ 0.15
CTNNB1-208ENST00000441708 ADAMTSL3P82987 1691 aa15.97■□□□□ 0.15
CTNNB1-208ENST00000441708 CD109Q6YHK3 1445 aa15.96■□□□□ 0.15
CTNNB1-208ENST00000441708 BCORL1Q5H9F3 1711 aa15.94■□□□□ 0.14
CTNNB1-208ENST00000441708 RAPGEF6Q8TEU7 1601 aa15.93■□□□□ 0.14
CTNNB1-208ENST00000441708 SAMD9Q5K651 1589 aa15.92■□□□□ 0.14
CTNNB1-208ENST00000441708 FRMPD1Q5SYB0 1578 aa15.92■□□□□ 0.14
CTNNB1-208ENST00000441708 RICTORQ6R327 1708 aa15.91■□□□□ 0.14
CTNNB1-208ENST00000441708 ARAP3Q8WWN8 1544 aa15.9■□□□□ 0.14
CTNNB1-208ENST00000441708 KCNH8Q96L42 1107 aa15.89■□□□□ 0.13
CTNNB1-208ENST00000441708 MADDQ8WXG6 1647 aa15.89■□□□□ 0.13
CTNNB1-208ENST00000441708 PRXQ9BXM0 1461 aa15.89■□□□□ 0.13
CTNNB1-208ENST00000441708 RIMS1Q86UR5 1692 aaKnown RBP15.88■□□□□ 0.13
CTNNB1-208ENST00000441708 SIGLEC1Q9BZZ2 1709 aa15.86■□□□□ 0.13
CTNNB1-208ENST00000441708 ATP10BO94823 1461 aa15.85■□□□□ 0.13
CTNNB1-208ENST00000441708 ARID3CA6NKF2 412 aa15.81■□□□□ 0.12
CTNNB1-208ENST00000441708 FER1L4A9Z1Z3 1794 aa15.8■□□□□ 0.12
CTNNB1-208ENST00000441708 ARHGEF40Q8TER5 1519 aa15.8■□□□□ 0.12
CTNNB1-208ENST00000441708 PTPRMP28827 1452 aa15.8■□□□□ 0.12
CTNNB1-208ENST00000441708 CFAP74Q9C0B2 1584 aa15.79■□□□□ 0.12
CTNNB1-208ENST00000441708 P3H3Q8IVL6 736 aa15.77■□□□□ 0.12
CTNNB1-208ENST00000441708 PCF11O94913 1555 aaKnown RBP15.77■□□□□ 0.11
CTNNB1-208ENST00000441708 NEO1Q92859 1461 aa15.77■□□□□ 0.11
CTNNB1-208ENST00000441708 TTC37Q6PGP7 1564 aa15.75■□□□□ 0.11
CTNNB1-208ENST00000441708 NUP153P49790 1475 aaKnown RBP15.74■□□□□ 0.11
CTNNB1-208ENST00000441708 MYO5CQ9NQX4 1742 aa15.72■□□□□ 0.11
CTNNB1-208ENST00000441708 LMTK3Q96Q04 1460 aa15.71■□□□□ 0.11
CTNNB1-208ENST00000441708 RAPGEF3O95398 923 aa15.71■□□□□ 0.11
CTNNB1-208ENST00000441708 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.71■□□□□ 0.11
CTNNB1-208ENST00000441708 PHLDB1Q86UU1 1377 aa15.71■□□□□ 0.11
CTNNB1-208ENST00000441708 LRRIQ1Q96JM4 1722 aa15.71■□□□□ 0.1
CTNNB1-208ENST00000441708 ZMYM4Q5VZL5 1548 aa15.69■□□□□ 0.1
CTNNB1-208ENST00000441708 FHOD3Q2V2M9 1422 aa15.68■□□□□ 0.1
CTNNB1-208ENST00000441708 PREX1Q8TCU6 1659 aa15.67■□□□□ 0.1
CTNNB1-208ENST00000441708 HECW1Q76N89 1606 aa15.66■□□□□ 0.1
CTNNB1-208ENST00000441708 FBXO41Q8TF61 875 aa15.66■□□□□ 0.1
CTNNB1-208ENST00000441708 EFCAB5A4FU69 1503 aa15.64■□□□□ 0.09
CTNNB1-208ENST00000441708 ZFYVE16Q7Z3T8 1539 aa15.64■□□□□ 0.09
CTNNB1-208ENST00000441708 FANCAO15360 1455 aa15.64■□□□□ 0.09
CTNNB1-208ENST00000441708 DENND4BO75064 1496 aaPredicted RBP15.63■□□□□ 0.09
CTNNB1-208ENST00000441708 CDK13Q14004 1512 aaKnown RBP15.63■□□□□ 0.09
CTNNB1-208ENST00000441708 AKNAQ7Z591 1439 aa15.62■□□□□ 0.09
CTNNB1-208ENST00000441708 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.62■□□□□ 0.09
CTNNB1-208ENST00000441708 HNRNPUL2Q1KMD3 747 aaKnown RBP15.62■□□□□ 0.09
CTNNB1-208ENST00000441708 FAM9AQ8IZU1 332 aaPredicted RBP15.62■□□□□ 0.09
CTNNB1-208ENST00000441708 STRCQ7RTU9 1775 aa15.62■□□□□ 0.09
CTNNB1-208ENST00000441708 ARID4BQ4LE39 1312 aaPredicted RBP15.61■□□□□ 0.09
CTNNB1-208ENST00000441708 CDC42BPBQ9Y5S2 1711 aa15.6■□□□□ 0.09
CTNNB1-208ENST00000441708 KIF14Q15058 1648 aa15.59■□□□□ 0.09
CTNNB1-208ENST00000441708 RANGAP1P46060 587 aaPredicted RBP15.59■□□□□ 0.09
CTNNB1-208ENST00000441708 CSRNP3Q8WYN3 585 aa15.59■□□□□ 0.09
CTNNB1-208ENST00000441708 YEATS2Q9ULM3 1422 aa15.59■□□□□ 0.09
CTNNB1-208ENST00000441708 SETD1BQ9UPS6 1966 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms