RNA–Protein interactions for RNA: ENST00000441708.1

CTNNB1-208, Transcript of catenin beta 1, humanhuman

TSL 4

Gene CTNNB1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-208ENST00000441708 NISCHQ9Y2I1 1504 aa23.64■■□□□ 1.37
CTNNB1-208ENST00000441708 ABCC9O60706 1549 aa21.54■■□□□ 1.04
CTNNB1-208ENST00000441708 CCDC180Q9P1Z9 1646 aa21.51■■□□□ 1.03
CTNNB1-208ENST00000441708 RB1CC1Q8TDY2 1594 aa20.46■□□□□ 0.87
CTNNB1-208ENST00000441708 UNC13AQ9UPW8 1703 aa20.37■□□□□ 0.85
CTNNB1-208ENST00000441708 DNAJC5BQ9UF47 199 aa20.33■□□□□ 0.85
CTNNB1-208ENST00000441708 NACADO15069 1562 aa20.22■□□□□ 0.83
CTNNB1-208ENST00000441708 BICRAQ9NZM4 1560 aa19.94■□□□□ 0.78
CTNNB1-208ENST00000441708 PABPN1Q86U42 306 aaKnown RBP eCLIP19.9■□□□□ 0.78
CTNNB1-208ENST00000441708 DCAF8L2P0C7V8 631 aa19.86■□□□□ 0.77
CTNNB1-208ENST00000441708 MYO15BQ96JP2 1530 aa19.81■□□□□ 0.76
CTNNB1-208ENST00000441708 CC2D2AQ9P2K1 1620 aa19.57■□□□□ 0.72
CTNNB1-208ENST00000441708 ZCCHC6Q5VYS8 1495 aaKnown RBP19.56■□□□□ 0.72
CTNNB1-208ENST00000441708 SCRIBQ14160 1630 aa19.53■□□□□ 0.72
CTNNB1-208ENST00000441708 DCAF1Q9Y4B6 1507 aa19.5■□□□□ 0.71
CTNNB1-208ENST00000441708 SHROOM4Q9ULL8 1493 aa19.49■□□□□ 0.71
CTNNB1-208ENST00000441708 EIF4G1Q04637 1599 aaKnown RBP19.42■□□□□ 0.7
CTNNB1-208ENST00000441708 CECR2Q9BXF3 1484 aa19.39■□□□□ 0.69
CTNNB1-208ENST00000441708 DNAJC5Q9H3Z4 198 aa18.78■□□□□ 0.6
CTNNB1-208ENST00000441708 CUX2O14529 1486 aa18.64■□□□□ 0.57
CTNNB1-208ENST00000441708 SMARCA4P51532 1647 aa18.6■□□□□ 0.57
CTNNB1-208ENST00000441708 NCAPD3P42695 1498 aa18.58■□□□□ 0.56
CTNNB1-208ENST00000441708 ERCC6Q03468 1493 aa18.57■□□□□ 0.56
CTNNB1-208ENST00000441708 HMGXB3Q12766 1538 aa18.54■□□□□ 0.56
CTNNB1-208ENST00000441708 ATAD2BQ9ULI0 1458 aa18.52■□□□□ 0.56
CTNNB1-208ENST00000441708 SMARCA2P51531 1590 aa18.51■□□□□ 0.55
CTNNB1-208ENST00000441708 NESP48681 1621 aa18.49■□□□□ 0.55
CTNNB1-208ENST00000441708 KIF21AQ7Z4S6 1674 aa18.47■□□□□ 0.55
CTNNB1-208ENST00000441708 THOC2Q8NI27 1593 aaKnown RBP18.47■□□□□ 0.55
CTNNB1-208ENST00000441708 BAZ1AQ9NRL2 1556 aaPredicted RBP18.38■□□□□ 0.53
CTNNB1-208ENST00000441708 PEG3Q9GZU2 1588 aa18.38■□□□□ 0.53
CTNNB1-208ENST00000441708 BAZ1BQ9UIG0 1483 aaKnown RBP18.35■□□□□ 0.53
CTNNB1-208ENST00000441708 LAMC3Q9Y6N6 1575 aa18.34■□□□□ 0.53
CTNNB1-208ENST00000441708 MROH2BQ7Z745 1585 aa18.24■□□□□ 0.51
CTNNB1-208ENST00000441708 WIZO95785 1651 aa18.15■□□□□ 0.5
CTNNB1-208ENST00000441708 PDS5BQ9NTI5 1447 aa18.06■□□□□ 0.48
CTNNB1-208ENST00000441708 WDR62O43379 1518 aa18.05■□□□□ 0.48
CTNNB1-208ENST00000441708 MRC2Q9UBG0 1479 aa18.01■□□□□ 0.47
CTNNB1-208ENST00000441708 PRDM2Q13029 1718 aa18.01■□□□□ 0.47
CTNNB1-208ENST00000441708 CADPSQ9ULU8 1353 aa17.96■□□□□ 0.47
CTNNB1-208ENST00000441708 CEP164Q9UPV0 1460 aa17.9■□□□□ 0.46
CTNNB1-208ENST00000441708 TRIM41Q8WV44 630 aa17.89■□□□□ 0.45
CTNNB1-208ENST00000441708 FANCD2Q9BXW9 1451 aa17.84■□□□□ 0.45
CTNNB1-208ENST00000441708 TOP2AP11388 1531 aaKnown RBP17.78■□□□□ 0.44
CTNNB1-208ENST00000441708 CFTRP13569 1480 aa17.77■□□□□ 0.44
CTNNB1-208ENST00000441708 URB2Q14146 1524 aaKnown RBP17.77■□□□□ 0.43
CTNNB1-208ENST00000441708 RIMBP3CA6NJZ7 1639 aa17.71■□□□□ 0.43
CTNNB1-208ENST00000441708 RIMBP3BA6NNM3 1639 aa17.71■□□□□ 0.43
CTNNB1-208ENST00000441708 RIMBP3Q9UFD9 1639 aa17.71■□□□□ 0.43
CTNNB1-208ENST00000441708 RSF1Q96T23 1441 aaPredicted RBP17.67■□□□□ 0.42
CTNNB1-208ENST00000441708 CHD1O14646 1710 aa17.65■□□□□ 0.42
CTNNB1-208ENST00000441708 OSCARQ8IYS5 282 aa17.6■□□□□ 0.41
CTNNB1-208ENST00000441708 EIF4G3O43432 1585 aaKnown RBP17.59■□□□□ 0.41
CTNNB1-208ENST00000441708 ZNF608Q9ULD9 1512 aaPredicted RBP17.57■□□□□ 0.4
CTNNB1-208ENST00000441708 TOPBP1Q92547 1522 aa17.52■□□□□ 0.4
CTNNB1-208ENST00000441708 ARHGEF11O15085 1522 aa17.52■□□□□ 0.39
CTNNB1-208ENST00000441708 CCDC88BA6NC98 1476 aa17.51■□□□□ 0.39
CTNNB1-208ENST00000441708 IFT140Q96RY7 1462 aa17.51■□□□□ 0.39
CTNNB1-208ENST00000441708 TARBP1Q13395 1621 aaKnown RBP17.49■□□□□ 0.39
CTNNB1-208ENST00000441708 DNMBPQ6XZF7 1577 aa17.49■□□□□ 0.39
CTNNB1-208ENST00000441708 ABCC8Q09428 1581 aa17.38■□□□□ 0.37
CTNNB1-208ENST00000441708 AQRO60306 1485 aaKnown RBP eCLIP17.32■□□□□ 0.363e-7■■■□□ 17
CTNNB1-208ENST00000441708 ARAP1Q96P48 1450 aa17.32■□□□□ 0.36
CTNNB1-208ENST00000441708 POLA1P09884 1462 aaPredicted RBP17.31■□□□□ 0.36
CTNNB1-208ENST00000441708 WDR97A6NE52 1622 aa17.31■□□□□ 0.36
CTNNB1-208ENST00000441708 PBRM1Q86U86 1689 aa17.3■□□□□ 0.36
CTNNB1-208ENST00000441708 RAD54L2Q9Y4B4 1467 aa17.24■□□□□ 0.35
CTNNB1-208ENST00000441708 CLASP1Q7Z460 1538 aa17.24■□□□□ 0.35
CTNNB1-208ENST00000441708 CYB5RLQ6IPT4 315 aa17.23■□□□□ 0.35
CTNNB1-208ENST00000441708 SNAPC4Q5SXM2 1469 aa17.18■□□□□ 0.34
CTNNB1-208ENST00000441708 FGD5Q6ZNL6 1462 aa17.18■□□□□ 0.34
CTNNB1-208ENST00000441708 SYNJ1O43426 1573 aa17.18■□□□□ 0.34
CTNNB1-208ENST00000441708 FBLN2P98095 1184 aa17.16■□□□□ 0.34
CTNNB1-208ENST00000441708 CUX1P39880 1505 aa17.16■□□□□ 0.34
CTNNB1-208ENST00000441708 SOGA1O94964 1423 aa17.14■□□□□ 0.33
CTNNB1-208ENST00000441708 TDRD9Q8NDG6 1382 aaKnown RBP17.13■□□□□ 0.33
CTNNB1-208ENST00000441708 TRHP20396 242 aaPredicted RBP17.12■□□□□ 0.33
CTNNB1-208ENST00000441708 MAGI1Q96QZ7 1491 aaPredicted RBP17.11■□□□□ 0.33
CTNNB1-208ENST00000441708 ABCA5Q8WWZ7 1642 aa17.09■□□□□ 0.33
CTNNB1-208ENST00000441708 GRIN2BQ13224 1484 aa17.05■□□□□ 0.32
CTNNB1-208ENST00000441708 SYNJ2O15056 1496 aa17.04■□□□□ 0.32
CTNNB1-208ENST00000441708 KIF13AQ9H1H9 1805 aa17■□□□□ 0.31
CTNNB1-208ENST00000441708 ERCC6L2Q5T890 1561 aa16.98■□□□□ 0.31
CTNNB1-208ENST00000441708 GAPVD1Q14C86 1478 aa16.98■□□□□ 0.31
CTNNB1-208ENST00000441708 CHMP7Q8WUX9 453 aaPredicted RBP16.97■□□□□ 0.31
CTNNB1-208ENST00000441708 ADAMTS12P58397 1594 aa16.95■□□□□ 0.3
CTNNB1-208ENST00000441708 BIVM-ERCC5R4GMW8 1640 aa16.95■□□□□ 0.3
CTNNB1-208ENST00000441708 ABCA10Q8WWZ4 1543 aa16.95■□□□□ 0.3
CTNNB1-208ENST00000441708 CEP170Q5SW79 1584 aa16.94■□□□□ 0.3
CTNNB1-208ENST00000441708 SHROOM2Q13796 1616 aa16.93■□□□□ 0.3
CTNNB1-208ENST00000441708 GRIN2AQ12879 1464 aa16.88■□□□□ 0.29
CTNNB1-208ENST00000441708 TOP2BQ02880 1626 aa16.86■□□□□ 0.29
CTNNB1-208ENST00000441708 NUP160Q12769 1436 aa16.79■□□□□ 0.28
CTNNB1-208ENST00000441708 AEBP2Q6ZN18 517 aaPredicted RBP16.77■□□□□ 0.28
CTNNB1-208ENST00000441708 ERICH3Q5RHP9 1530 aa16.75■□□□□ 0.27
CTNNB1-208ENST00000441708 TSPOAP1O95153 1857 aa16.74■□□□□ 0.27
CTNNB1-208ENST00000441708 WRNQ14191 1432 aaPredicted RBP eCLIP16.74■□□□□ 0.27
CTNNB1-208ENST00000441708 RUSC2Q8N2Y8 1516 aa16.74■□□□□ 0.27
CTNNB1-208ENST00000441708 FHAD1B1AJZ9 1412 aa16.71■□□□□ 0.27
CTNNB1-208ENST00000441708 ADCY10Q96PN6 1610 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms