RNA–Protein interactions for RNA: ENST00000437615.1

LINC00242-201, long intergenic non-protein coding RNA 242, humanhuman

TSL 2 BASIC

Gene LINC00242, Length 2,418 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242-201ENST00000437615 WDR62O43379 1518 aa18.82■□□□□ 0.6
LINC00242-201ENST00000437615 HNRNPUL2Q1KMD3 747 aaKnown RBP18.82■□□□□ 0.6
LINC00242-201ENST00000437615 IFT140Q96RY7 1462 aa18.81■□□□□ 0.6
LINC00242-201ENST00000437615 FHAD1B1AJZ9 1412 aa18.78■□□□□ 0.6
LINC00242-201ENST00000437615 FHOD3Q2V2M9 1422 aa18.77■□□□□ 0.6
LINC00242-201ENST00000437615 ATP1B4Q9UN42 357 aaPredicted RBP18.77■□□□□ 0.6
LINC00242-201ENST00000437615 ZNF608Q9ULD9 1512 aaPredicted RBP18.76■□□□□ 0.59
LINC00242-201ENST00000437615 GRIN2BQ13224 1484 aa18.76■□□□□ 0.59
LINC00242-201ENST00000437615 EFCAB5A4FU69 1503 aa18.74■□□□□ 0.59
LINC00242-201ENST00000437615 CTTNBP2Q8WZ74 1663 aa18.73■□□□□ 0.59
LINC00242-201ENST00000437615 PBRM1Q86U86 1689 aa18.7■□□□□ 0.58
LINC00242-201ENST00000437615 MAP3K1Q13233 1512 aa18.7■□□□□ 0.58
LINC00242-201ENST00000437615 TIAM1Q13009 1591 aa18.67■□□□□ 0.58
LINC00242-201ENST00000437615 FMN1Q68DA7 1419 aa18.67■□□□□ 0.58
LINC00242-201ENST00000437615 ADAMTS12P58397 1594 aa18.66■□□□□ 0.58
LINC00242-201ENST00000437615 THOC2Q8NI27 1593 aaKnown RBP18.66■□□□□ 0.58
LINC00242-201ENST00000437615 CASKIN1Q8WXD9 1431 aa18.66■□□□□ 0.58
LINC00242-201ENST00000437615 LRRC9Q6ZRR7 1453 aa18.64■□□□□ 0.57
LINC00242-201ENST00000437615 PCF11O94913 1555 aaKnown RBP18.64■□□□□ 0.57
LINC00242-201ENST00000437615 RRBP1Q9P2E9 1410 aaKnown RBP18.64■□□□□ 0.57
LINC00242-201ENST00000437615 FYCO1Q9BQS8 1478 aa18.62■□□□□ 0.57
LINC00242-201ENST00000437615 CCNB3Q8WWL7 1395 aa18.61■□□□□ 0.57
LINC00242-201ENST00000437615 SNAPC4Q5SXM2 1469 aa18.61■□□□□ 0.57
LINC00242-201ENST00000437615 SAMD9Q5K651 1589 aa18.61■□□□□ 0.57
LINC00242-201ENST00000437615 EIF4G3O43432 1585 aaKnown RBP18.59■□□□□ 0.57
LINC00242-201ENST00000437615 CHMP7Q8WUX9 453 aaPredicted RBP18.57■□□□□ 0.56
LINC00242-201ENST00000437615 IQGAP2Q13576 1575 aa18.56■□□□□ 0.56
LINC00242-201ENST00000437615 ITGAEP38570 1179 aa18.55■□□□□ 0.56
LINC00242-201ENST00000437615 FBLN2P98095 1184 aa18.55■□□□□ 0.56
LINC00242-201ENST00000437615 PHLDB1Q86UU1 1377 aa18.55■□□□□ 0.56
LINC00242-201ENST00000437615 GRIN2AQ12879 1464 aa18.53■□□□□ 0.56
LINC00242-201ENST00000437615 CFAP43Q8NDM7 1665 aa18.52■□□□□ 0.56
LINC00242-201ENST00000437615 MAGI1Q96QZ7 1491 aaPredicted RBP18.52■□□□□ 0.56
LINC00242-201ENST00000437615 KIAA0586Q9BVV6 1533 aa18.52■□□□□ 0.56
LINC00242-201ENST00000437615 MTUS2Q5JR59 1369 aa18.49■□□□□ 0.55
LINC00242-201ENST00000437615 FAM50AQ14320 339 aaKnown RBP18.49■□□□□ 0.55
LINC00242-201ENST00000437615 SYNJ2O15056 1496 aa18.48■□□□□ 0.55
LINC00242-201ENST00000437615 UGGT2Q9NYU1 1516 aa18.47■□□□□ 0.55
LINC00242-201ENST00000437615 DISP1Q96F81 1524 aa18.41■□□□□ 0.54
LINC00242-201ENST00000437615 ARID3CA6NKF2 412 aa18.39■□□□□ 0.53
LINC00242-201ENST00000437615 JPH4Q96JJ6 628 aa18.39■□□□□ 0.53
LINC00242-201ENST00000437615 DHX57Q6P158 1386 aaKnown RBP18.38■□□□□ 0.53
LINC00242-201ENST00000437615 CCDC18Q5T9S5 1454 aa18.38■□□□□ 0.53
LINC00242-201ENST00000437615 CEP170Q5SW79 1584 aa18.37■□□□□ 0.53
LINC00242-201ENST00000437615 LRRIQ1Q96JM4 1722 aa18.37■□□□□ 0.53
LINC00242-201ENST00000437615 NUP160Q12769 1436 aa18.36■□□□□ 0.53
LINC00242-201ENST00000437615 KIAA0556O60303 1618 aa18.35■□□□□ 0.53
LINC00242-201ENST00000437615 EPRSP07814 1512 aaKnown RBP18.35■□□□□ 0.53
LINC00242-201ENST00000437615 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.35■□□□□ 0.53
LINC00242-201ENST00000437615 HECW1Q76N89 1606 aa18.35■□□□□ 0.53
LINC00242-201ENST00000437615 NCOA2Q15596 1464 aa18.35■□□□□ 0.53
LINC00242-201ENST00000437615 CLSPNQ9HAW4 1339 aa18.35■□□□□ 0.53
LINC00242-201ENST00000437615 FGD6Q6ZV73 1430 aa18.34■□□□□ 0.53
LINC00242-201ENST00000437615 RAB3GAP2Q9H2M9 1393 aa18.33■□□□□ 0.52
LINC00242-201ENST00000437615 EHBP1L1Q8N3D4 1523 aa18.32■□□□□ 0.52
LINC00242-201ENST00000437615 SETD5Q9C0A6 1442 aa18.32■□□□□ 0.52
LINC00242-201ENST00000437615 MAGI3Q5TCQ9 1506 aa18.31■□□□□ 0.52
LINC00242-201ENST00000437615 CARMIL2Q6F5E8 1435 aa18.3■□□□□ 0.52
LINC00242-201ENST00000437615 CDK13Q14004 1512 aaKnown RBP18.3■□□□□ 0.52
LINC00242-201ENST00000437615 MYOM3Q5VTT5 1437 aa18.3■□□□□ 0.52
LINC00242-201ENST00000437615 SUPT6HQ7KZ85 1726 aaKnown RBP18.28■□□□□ 0.52
LINC00242-201ENST00000437615 CDK11AQ9UQ88 783 aaPredicted RBP18.25■□□□□ 0.51
LINC00242-201ENST00000437615 NUP153P49790 1475 aaKnown RBP18.25■□□□□ 0.51
LINC00242-201ENST00000437615 ARHGEF11O15085 1522 aa18.24■□□□□ 0.51
LINC00242-201ENST00000437615 RAPGEF6Q8TEU7 1601 aa18.22■□□□□ 0.51
LINC00242-201ENST00000437615 PLB1Q6P1J6 1458 aa18.22■□□□□ 0.51
LINC00242-201ENST00000437615 ZNF316A6NFI3 1004 aaPredicted RBP18.2■□□□□ 0.5
LINC00242-201ENST00000437615 PTPRKQ15262 1439 aa18.2■□□□□ 0.5
LINC00242-201ENST00000437615 PRG4Q92954 1404 aaPredicted RBP18.17■□□□□ 0.5
LINC00242-201ENST00000437615 PTPN23Q9H3S7 1636 aa18.16■□□□□ 0.5
LINC00242-201ENST00000437615 MIA2Q96PC5 1412 aa18.16■□□□□ 0.5
LINC00242-201ENST00000437615 DIEXFQ68CQ4 756 aaKnown RBP18.14■□□□□ 0.5
LINC00242-201ENST00000437615 TCOF1Q13428 1488 aaKnown RBP18.13■□□□□ 0.49
LINC00242-201ENST00000437615 CHIC2Q9UKJ5 165 aa18.13■□□□□ 0.49
LINC00242-201ENST00000437615 HFM1A2PYH4 1435 aa18.12■□□□□ 0.49
LINC00242-201ENST00000437615 PTPRGP23470 1445 aa18.12■□□□□ 0.49
LINC00242-201ENST00000437615 TROQ12816 1431 aaPredicted RBP18.11■□□□□ 0.49
LINC00242-201ENST00000437615 PLEKHD1A6NEE1 506 aa18.11■□□□□ 0.49
LINC00242-201ENST00000437615 CHD1O14646 1710 aa18.1■□□□□ 0.49
LINC00242-201ENST00000437615 MAPKBP1O60336 1514 aa18.1■□□□□ 0.49
LINC00242-201ENST00000437615 RRP7BPQ9NSQ0 103 aa18.1■□□□□ 0.49
LINC00242-201ENST00000437615 NAIPQ13075 1403 aa18.09■□□□□ 0.49
LINC00242-201ENST00000437615 ABCA8O94911 1581 aa18.08■□□□□ 0.48
LINC00242-201ENST00000437615 ZNF644Q9H582 1327 aaPredicted RBP18.07■□□□□ 0.48
LINC00242-201ENST00000437615 SIN3AQ96ST3 1273 aa18.07■□□□□ 0.48
LINC00242-201ENST00000437615 ATP10BO94823 1461 aa18.06■□□□□ 0.48
LINC00242-201ENST00000437615 NEUROD1Q13562 356 aa18.06■□□□□ 0.48
LINC00242-201ENST00000437615 CFDP1Q9UEE9 299 aaPredicted RBP18.06■□□□□ 0.48
LINC00242-201ENST00000437615 ZNF777Q9ULD5 760 aaPredicted RBP18.01■□□□□ 0.47
LINC00242-201ENST00000437615 UACAQ9BZF9 1416 aa18.01■□□□□ 0.47
LINC00242-201ENST00000437615 GPATCH8Q9UKJ3 1502 aaKnown RBP18■□□□□ 0.47
LINC00242-201ENST00000437615 DAPK1P53355 1430 aa17.99■□□□□ 0.47
LINC00242-201ENST00000437615 ABCC5O15440 1437 aa17.98■□□□□ 0.47
LINC00242-201ENST00000437615 SHROOM2Q13796 1616 aa17.98■□□□□ 0.47
LINC00242-201ENST00000437615 TRIM52Q96A61 297 aa17.97■□□□□ 0.47
LINC00242-201ENST00000437615 AKNAQ7Z591 1439 aa17.97■□□□□ 0.47
LINC00242-201ENST00000437615 KIF14Q15058 1648 aa17.97■□□□□ 0.47
LINC00242-201ENST00000437615 TIMELESSQ9UNS1 1208 aa17.97■□□□□ 0.47
LINC00242-201ENST00000437615 ERCC6L2Q5T890 1561 aa17.94■□□□□ 0.46
LINC00242-201ENST00000437615 ROCK1Q13464 1354 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms