RNA–Protein interactions for RNA: ENST00000437615.1

LINC00242-201, long intergenic non-protein coding RNA 242, humanhuman

TSL 2 BASIC

Gene LINC00242, Length 2,418 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242-201ENST00000437615 NISCHQ9Y2I1 1504 aa27.14■■□□□ 1.94
LINC00242-201ENST00000437615 CCDC180Q9P1Z9 1646 aa23.34■■□□□ 1.33
LINC00242-201ENST00000437615 ZCCHC6Q5VYS8 1495 aaKnown RBP22.82■■□□□ 1.24
LINC00242-201ENST00000437615 DCAF8L2P0C7V8 631 aa22.63■■□□□ 1.21
LINC00242-201ENST00000437615 SHROOM4Q9ULL8 1493 aa22.59■■□□□ 1.21
LINC00242-201ENST00000437615 DCAF1Q9Y4B6 1507 aa22.34■■□□□ 1.17
LINC00242-201ENST00000437615 ABCC9O60706 1549 aa22.06■■□□□ 1.12
LINC00242-201ENST00000437615 SUPT5HO00267 1087 aaKnown RBP21.95■■□□□ 1.1
LINC00242-201ENST00000437615 MYO15BQ96JP2 1530 aa21.94■■□□□ 1.1
LINC00242-201ENST00000437615 NACADO15069 1562 aa21.76■■□□□ 1.07
LINC00242-201ENST00000437615 SCRIBQ14160 1630 aa21.69■■□□□ 1.06
LINC00242-201ENST00000437615 RB1CC1Q8TDY2 1594 aa21.51■■□□□ 1.03
LINC00242-201ENST00000437615 RSF1Q96T23 1441 aaPredicted RBP21.24■□□□□ 0.99
LINC00242-201ENST00000437615 CECR2Q9BXF3 1484 aa21.15■□□□□ 0.98
LINC00242-201ENST00000437615 CHIC1Q5VXU3 224 aa21.1■□□□□ 0.97
LINC00242-201ENST00000437615 MROH2BQ7Z745 1585 aa21.02■□□□□ 0.96
LINC00242-201ENST00000437615 UNC13AQ9UPW8 1703 aa21.02■□□□□ 0.95
LINC00242-201ENST00000437615 PABPN1Q86U42 306 aaKnown RBP eCLIP20.99■□□□□ 0.95
LINC00242-201ENST00000437615 BAZ1AQ9NRL2 1556 aaPredicted RBP20.9■□□□□ 0.94
LINC00242-201ENST00000437615 BICRAQ9NZM4 1560 aa20.87■□□□□ 0.93
LINC00242-201ENST00000437615 WIZO95785 1651 aa20.84■□□□□ 0.93
LINC00242-201ENST00000437615 SMARCA4P51532 1647 aa20.75■□□□□ 0.91
LINC00242-201ENST00000437615 TOP2AP11388 1531 aaKnown RBP20.58■□□□□ 0.88
LINC00242-201ENST00000437615 TRIM41Q8WV44 630 aa20.56■□□□□ 0.88
LINC00242-201ENST00000437615 CCDC88BA6NC98 1476 aa20.48■□□□□ 0.87
LINC00242-201ENST00000437615 PEG3Q9GZU2 1588 aa20.43■□□□□ 0.86
LINC00242-201ENST00000437615 SMARCA2P51531 1590 aa20.41■□□□□ 0.86
LINC00242-201ENST00000437615 ATAD2BQ9ULI0 1458 aa20.4■□□□□ 0.86
LINC00242-201ENST00000437615 LOC105371045A0A1W2PR82 267 aa20.4■□□□□ 0.86
LINC00242-201ENST00000437615 BAZ1BQ9UIG0 1483 aaKnown RBP20.3■□□□□ 0.84
LINC00242-201ENST00000437615 EIF4G1Q04637 1599 aaKnown RBP20.3■□□□□ 0.84
LINC00242-201ENST00000437615 FAM9AQ8IZU1 332 aaPredicted RBP20.27■□□□□ 0.84
LINC00242-201ENST00000437615 NCAPD3P42695 1498 aa20.16■□□□□ 0.82
LINC00242-201ENST00000437615 ABCC8Q09428 1581 aa20.15■□□□□ 0.82
LINC00242-201ENST00000437615 HMGXB3Q12766 1538 aa20.06■□□□□ 0.8
LINC00242-201ENST00000437615 EHMT2Q96KQ7 1210 aa20.05■□□□□ 0.8
LINC00242-201ENST00000437615 WRNQ14191 1432 aaPredicted RBP eCLIP19.98■□□□□ 0.79
LINC00242-201ENST00000437615 SOGA1O94964 1423 aa19.9■□□□□ 0.78
LINC00242-201ENST00000437615 CC2D2AQ9P2K1 1620 aa19.87■□□□□ 0.77
LINC00242-201ENST00000437615 SYNJ1O43426 1573 aa19.83■□□□□ 0.76
LINC00242-201ENST00000437615 CSRNP3Q8WYN3 585 aa19.82■□□□□ 0.76
LINC00242-201ENST00000437615 PCGF6Q9BYE7 350 aa19.81■□□□□ 0.76
LINC00242-201ENST00000437615 EEA1Q15075 1411 aa19.81■□□□□ 0.76
LINC00242-201ENST00000437615 RUSC2Q8N2Y8 1516 aa19.8■□□□□ 0.76
LINC00242-201ENST00000437615 CFTRP13569 1480 aa19.8■□□□□ 0.76
LINC00242-201ENST00000437615 CADPSQ9ULU8 1353 aa19.72■□□□□ 0.75
LINC00242-201ENST00000437615 TOP2BQ02880 1626 aa19.69■□□□□ 0.74
LINC00242-201ENST00000437615 UBTFP17480 764 aaKnown RBP19.66■□□□□ 0.74
LINC00242-201ENST00000437615 TRIM26Q12899 539 aaPredicted RBP19.64■□□□□ 0.74
LINC00242-201ENST00000437615 TNIKQ9UKE5 1360 aa19.62■□□□□ 0.73
LINC00242-201ENST00000437615 CUX1P39880 1505 aa19.61■□□□□ 0.73
LINC00242-201ENST00000437615 BIVM-ERCC5R4GMW8 1640 aa19.61■□□□□ 0.73
LINC00242-201ENST00000437615 GOLGA3Q08378 1498 aa19.57■□□□□ 0.72
LINC00242-201ENST00000437615 CEP164Q9UPV0 1460 aa19.54■□□□□ 0.72
LINC00242-201ENST00000437615 CEP162Q5TB80 1403 aa19.54■□□□□ 0.72
LINC00242-201ENST00000437615 PRDM2Q13029 1718 aa19.5■□□□□ 0.71
LINC00242-201ENST00000437615 DNAJC5BQ9UF47 199 aa19.5■□□□□ 0.71
LINC00242-201ENST00000437615 FANCD2Q9BXW9 1451 aa19.47■□□□□ 0.71
LINC00242-201ENST00000437615 KIF21BO75037 1637 aa19.47■□□□□ 0.71
LINC00242-201ENST00000437615 PPARGC1BQ86YN6 1023 aaKnown RBP19.46■□□□□ 0.71
LINC00242-201ENST00000437615 NESP48681 1621 aa19.46■□□□□ 0.71
LINC00242-201ENST00000437615 KIF27Q86VH2 1401 aa19.45■□□□□ 0.7
LINC00242-201ENST00000437615 RAPGEF2Q9Y4G8 1499 aa19.44■□□□□ 0.7
LINC00242-201ENST00000437615 HRCP23327 699 aa19.42■□□□□ 0.7
LINC00242-201ENST00000437615 FGD5Q6ZNL6 1462 aa19.37■□□□□ 0.69
LINC00242-201ENST00000437615 PRXQ9BXM0 1461 aa19.37■□□□□ 0.69
LINC00242-201ENST00000437615 LAMC3Q9Y6N6 1575 aa19.34■□□□□ 0.69
LINC00242-201ENST00000437615 CUX2O14529 1486 aa19.34■□□□□ 0.69
LINC00242-201ENST00000437615 RANGAP1P46060 587 aaPredicted RBP19.33■□□□□ 0.69
LINC00242-201ENST00000437615 CLIP1P30622 1438 aa19.33■□□□□ 0.68
LINC00242-201ENST00000437615 ERICH3Q5RHP9 1530 aa19.3■□□□□ 0.68
LINC00242-201ENST00000437615 IGF1RP08069 1367 aa19.29■□□□□ 0.68
LINC00242-201ENST00000437615 PDS5BQ9NTI5 1447 aa19.29■□□□□ 0.68
LINC00242-201ENST00000437615 DNMBPQ6XZF7 1577 aa19.28■□□□□ 0.68
LINC00242-201ENST00000437615 TOPBP1Q92547 1522 aa19.28■□□□□ 0.68
LINC00242-201ENST00000437615 TTBK1Q5TCY1 1321 aaPredicted RBP19.25■□□□□ 0.67
LINC00242-201ENST00000437615 RAD54L2Q9Y4B4 1467 aa19.23■□□□□ 0.67
LINC00242-201ENST00000437615 POLA1P09884 1462 aaPredicted RBP19.22■□□□□ 0.67
LINC00242-201ENST00000437615 CARMIL1Q5VZK9 1371 aa19.2■□□□□ 0.66
LINC00242-201ENST00000437615 URB2Q14146 1524 aaKnown RBP19.2■□□□□ 0.66
LINC00242-201ENST00000437615 VPS8Q8N3P4 1428 aa19.17■□□□□ 0.66
LINC00242-201ENST00000437615 ABCA10Q8WWZ4 1543 aa19.17■□□□□ 0.66
LINC00242-201ENST00000437615 APLP2Q06481 763 aa19.13■□□□□ 0.65
LINC00242-201ENST00000437615 KIF21AQ7Z4S6 1674 aa19.08■□□□□ 0.65
LINC00242-201ENST00000437615 TDRD9Q8NDG6 1382 aaKnown RBP19.06■□□□□ 0.64
LINC00242-201ENST00000437615 ARAP1Q96P48 1450 aa19.05■□□□□ 0.64
LINC00242-201ENST00000437615 ARHGAP35Q9NRY4 1499 aa19■□□□□ 0.63
LINC00242-201ENST00000437615 ZEB1P37275 1124 aaPredicted RBP18.99■□□□□ 0.63
LINC00242-201ENST00000437615 MRC2Q9UBG0 1479 aa18.98■□□□□ 0.63
LINC00242-201ENST00000437615 GAPVD1Q14C86 1478 aa18.97■□□□□ 0.63
LINC00242-201ENST00000437615 WDR97A6NE52 1622 aa18.95■□□□□ 0.62
LINC00242-201ENST00000437615 CUL7Q14999 1698 aa18.93■□□□□ 0.62
LINC00242-201ENST00000437615 ABCA5Q8WWZ7 1642 aa18.92■□□□□ 0.62
LINC00242-201ENST00000437615 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.91■□□□□ 0.62
LINC00242-201ENST00000437615 TARBP1Q13395 1621 aaKnown RBP18.91■□□□□ 0.62
LINC00242-201ENST00000437615 KANK4Q5T7N3 995 aaPredicted RBP18.9■□□□□ 0.62
LINC00242-201ENST00000437615 P3H3Q8IVL6 736 aa18.9■□□□□ 0.62
LINC00242-201ENST00000437615 AQRO60306 1485 aaKnown RBP eCLIP18.86■□□□□ 0.61
LINC00242-201ENST00000437615 ERCC6Q03468 1493 aa18.86■□□□□ 0.61
LINC00242-201ENST00000437615 CCER1Q8TC90 406 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms