RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 ADAMTS12P58397 1594 aa23.79■■□□□ 1.4
SGCE-205ENST00000437425 RANGAP1P46060 587 aaPredicted RBP23.79■■□□□ 1.4
SGCE-205ENST00000437425 ZNF608Q9ULD9 1512 aaPredicted RBP23.75■■□□□ 1.39
SGCE-205ENST00000437425 EIF4G3O43432 1585 aaKnown RBP23.74■■□□□ 1.39
SGCE-205ENST00000437425 MAGI1Q96QZ7 1491 aaPredicted RBP23.7■■□□□ 1.38
SGCE-205ENST00000437425 PPARGC1BQ86YN6 1023 aaKnown RBP23.67■■□□□ 1.38
SGCE-205ENST00000437425 MAP3K1Q13233 1512 aa23.65■■□□□ 1.38
SGCE-205ENST00000437425 SNAPC4Q5SXM2 1469 aa23.64■■□□□ 1.37
SGCE-205ENST00000437425 SAMD9Q5K651 1589 aa23.61■■□□□ 1.37
SGCE-205ENST00000437425 FMN1Q68DA7 1419 aa23.59■■□□□ 1.37
SGCE-205ENST00000437425 IQGAP2Q13576 1575 aa23.58■■□□□ 1.37
SGCE-205ENST00000437425 SYNJ2O15056 1496 aa23.57■■□□□ 1.36
SGCE-205ENST00000437425 GRIN2AQ12879 1464 aa23.57■■□□□ 1.36
SGCE-205ENST00000437425 FYCO1Q9BQS8 1478 aa23.54■■□□□ 1.36
SGCE-205ENST00000437425 KIAA0586Q9BVV6 1533 aa23.54■■□□□ 1.36
SGCE-205ENST00000437425 HRCP23327 699 aa23.54■■□□□ 1.36
SGCE-205ENST00000437425 FHOD3Q2V2M9 1422 aa23.52■■□□□ 1.36
SGCE-205ENST00000437425 CASKIN1Q8WXD9 1431 aa23.52■■□□□ 1.36
SGCE-205ENST00000437425 UGGT2Q9NYU1 1516 aa23.5■■□□□ 1.35
SGCE-205ENST00000437425 TIAM1Q13009 1591 aa23.49■■□□□ 1.35
SGCE-205ENST00000437425 CHMP7Q8WUX9 453 aaPredicted RBP23.49■■□□□ 1.35
SGCE-205ENST00000437425 PCF11O94913 1555 aaKnown RBP23.46■■□□□ 1.35
SGCE-205ENST00000437425 TTBK1Q5TCY1 1321 aaPredicted RBP23.45■■□□□ 1.34
SGCE-205ENST00000437425 P3H3Q8IVL6 736 aa23.45■■□□□ 1.34
SGCE-205ENST00000437425 CFAP43Q8NDM7 1665 aa23.43■■□□□ 1.34
SGCE-205ENST00000437425 NUP160Q12769 1436 aa23.41■■□□□ 1.34
SGCE-205ENST00000437425 KANK4Q5T7N3 995 aaPredicted RBP23.38■■□□□ 1.33
SGCE-205ENST00000437425 LRRC9Q6ZRR7 1453 aa23.38■■□□□ 1.33
SGCE-205ENST00000437425 ZEB1P37275 1124 aaPredicted RBP23.38■■□□□ 1.33
SGCE-205ENST00000437425 CEP170Q5SW79 1584 aa23.35■■□□□ 1.33
SGCE-205ENST00000437425 RRBP1Q9P2E9 1410 aaKnown RBP23.32■■□□□ 1.32
SGCE-205ENST00000437425 CCDC18Q5T9S5 1454 aa23.31■■□□□ 1.32
SGCE-205ENST00000437425 KIAA0556O60303 1618 aa23.31■■□□□ 1.32
SGCE-205ENST00000437425 FBLN2P98095 1184 aa23.31■■□□□ 1.32
SGCE-205ENST00000437425 DISP1Q96F81 1524 aa23.29■■□□□ 1.32
SGCE-205ENST00000437425 ATP1B4Q9UN42 357 aaPredicted RBP23.28■■□□□ 1.32
SGCE-205ENST00000437425 HECW1Q76N89 1606 aa23.28■■□□□ 1.32
SGCE-205ENST00000437425 CARMIL2Q6F5E8 1435 aa23.28■■□□□ 1.32
SGCE-205ENST00000437425 CCNB3Q8WWL7 1395 aa23.22■■□□□ 1.31
SGCE-205ENST00000437425 JPH4Q96JJ6 628 aa23.22■■□□□ 1.31
SGCE-205ENST00000437425 MTUS2Q5JR59 1369 aa23.19■■□□□ 1.3
SGCE-205ENST00000437425 EHBP1L1Q8N3D4 1523 aa23.18■■□□□ 1.3
SGCE-205ENST00000437425 CHD1O14646 1710 aa23.16■■□□□ 1.3
SGCE-205ENST00000437425 EPRSP07814 1512 aaKnown RBP23.14■■□□□ 1.3
SGCE-205ENST00000437425 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.14■■□□□ 1.3
SGCE-205ENST00000437425 LRRIQ1Q96JM4 1722 aa23.14■■□□□ 1.29
SGCE-205ENST00000437425 RAPGEF6Q8TEU7 1601 aa23.12■■□□□ 1.29
SGCE-205ENST00000437425 HNRNPUL2Q1KMD3 747 aaKnown RBP23.11■■□□□ 1.29
SGCE-205ENST00000437425 SUPT6HQ7KZ85 1726 aaKnown RBP23.11■■□□□ 1.29
SGCE-205ENST00000437425 PHLDB1Q86UU1 1377 aa23.1■■□□□ 1.29
SGCE-205ENST00000437425 CCER1Q8TC90 406 aaPredicted RBP23.1■■□□□ 1.29
SGCE-205ENST00000437425 CDK11AQ9UQ88 783 aaPredicted RBP23.06■■□□□ 1.28
SGCE-205ENST00000437425 SHROOM2Q13796 1616 aa23.05■■□□□ 1.28
SGCE-205ENST00000437425 NUP153P49790 1475 aaKnown RBP23.04■■□□□ 1.28
SGCE-205ENST00000437425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.03■■□□□ 1.28
SGCE-205ENST00000437425 NCOA2Q15596 1464 aa23.03■■□□□ 1.28
SGCE-205ENST00000437425 ARHGEF11O15085 1522 aa23.03■■□□□ 1.28
SGCE-205ENST00000437425 PRG4Q92954 1404 aaPredicted RBP23.03■■□□□ 1.28
SGCE-205ENST00000437425 FGD6Q6ZV73 1430 aa23■■□□□ 1.27
SGCE-205ENST00000437425 MYOM3Q5VTT5 1437 aa23■■□□□ 1.27
SGCE-205ENST00000437425 CDK13Q14004 1512 aaKnown RBP22.98■■□□□ 1.27
SGCE-205ENST00000437425 ABCA8O94911 1581 aa22.98■■□□□ 1.27
SGCE-205ENST00000437425 MAGI3Q5TCQ9 1506 aa22.97■■□□□ 1.27
SGCE-205ENST00000437425 CLASP1Q7Z460 1538 aa22.96■■□□□ 1.27
SGCE-205ENST00000437425 PLB1Q6P1J6 1458 aa22.95■■□□□ 1.26
SGCE-205ENST00000437425 PTPRGP23470 1445 aa22.95■■□□□ 1.26
SGCE-205ENST00000437425 MIA2Q96PC5 1412 aa22.93■■□□□ 1.26
SGCE-205ENST00000437425 FAM50AQ14320 339 aaKnown RBP22.92■■□□□ 1.26
SGCE-205ENST00000437425 CLSPNQ9HAW4 1339 aa22.9■■□□□ 1.26
SGCE-205ENST00000437425 TROQ12816 1431 aaPredicted RBP22.9■■□□□ 1.26
SGCE-205ENST00000437425 TCOF1Q13428 1488 aaKnown RBP22.87■■□□□ 1.25
SGCE-205ENST00000437425 PTPN23Q9H3S7 1636 aa22.85■■□□□ 1.25
SGCE-205ENST00000437425 ADCY10Q96PN6 1610 aa22.84■■□□□ 1.25
SGCE-205ENST00000437425 OSCARQ8IYS5 282 aa22.84■■□□□ 1.25
SGCE-205ENST00000437425 UACAQ9BZF9 1416 aa22.84■■□□□ 1.25
SGCE-205ENST00000437425 SETD5Q9C0A6 1442 aa22.83■■□□□ 1.25
SGCE-205ENST00000437425 ITGAEP38570 1179 aa22.82■■□□□ 1.24
SGCE-205ENST00000437425 ATP10BO94823 1461 aa22.82■■□□□ 1.24
SGCE-205ENST00000437425 PLEKHD1A6NEE1 506 aa22.81■■□□□ 1.24
SGCE-205ENST00000437425 ARID3CA6NKF2 412 aa22.79■■□□□ 1.24
SGCE-205ENST00000437425 ITSN2Q9NZM3 1697 aa22.76■■□□□ 1.23
SGCE-205ENST00000437425 ABCC2Q92887 1545 aa22.76■■□□□ 1.23
SGCE-205ENST00000437425 RAB3GAP2Q9H2M9 1393 aa22.75■■□□□ 1.23
SGCE-205ENST00000437425 DHX57Q6P158 1386 aaKnown RBP22.75■■□□□ 1.23
SGCE-205ENST00000437425 UHRF1BP1LA0JNW5 1464 aa22.74■■□□□ 1.23
SGCE-205ENST00000437425 KIF14Q15058 1648 aa22.74■■□□□ 1.23
SGCE-205ENST00000437425 ACIN1Q9UKV3 1341 aaKnown RBP22.72■■□□□ 1.23
SGCE-205ENST00000437425 HFM1A2PYH4 1435 aa22.71■■□□□ 1.23
SGCE-205ENST00000437425 AKNAQ7Z591 1439 aa22.71■■□□□ 1.23
SGCE-205ENST00000437425 ERCC6L2Q5T890 1561 aa22.71■■□□□ 1.23
SGCE-205ENST00000437425 GPATCH8Q9UKJ3 1502 aaKnown RBP22.67■■□□□ 1.22
SGCE-205ENST00000437425 ABCC10Q5T3U5 1492 aa22.64■■□□□ 1.22
SGCE-205ENST00000437425 CFDP1Q9UEE9 299 aaPredicted RBP22.64■■□□□ 1.21
SGCE-205ENST00000437425 PTPRKQ15262 1439 aa22.64■■□□□ 1.21
SGCE-205ENST00000437425 ROCK1Q13464 1354 aa22.62■■□□□ 1.21
SGCE-205ENST00000437425 DNMT1P26358 1616 aaKnown RBP22.62■■□□□ 1.21
SGCE-205ENST00000437425 KDM5BQ9UGL1 1544 aa22.61■■□□□ 1.21
SGCE-205ENST00000437425 NAIPQ13075 1403 aa22.6■■□□□ 1.21
SGCE-205ENST00000437425 DAPK1P53355 1430 aa22.59■■□□□ 1.21
SGCE-205ENST00000437425 CAMSAP2Q08AD1 1489 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms