RNA–Protein interactions for RNA: ENST00000436630.6

RPE-208, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 1,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-208ENST00000436630 CEP170Q5SW79 1584 aa21.69■■□□□ 1.06
RPE-208ENST00000436630 IQGAP2Q13576 1575 aa21.67■■□□□ 1.06
RPE-208ENST00000436630 FBLN2P98095 1184 aa21.66■■□□□ 1.06
RPE-208ENST00000436630 KIAA0586Q9BVV6 1533 aa21.65■■□□□ 1.06
RPE-208ENST00000436630 EHMT2Q96KQ7 1210 aa21.64■■□□□ 1.05
RPE-208ENST00000436630 CEP162Q5TB80 1403 aa21.59■■□□□ 1.05
RPE-208ENST00000436630 EFCAB5A4FU69 1503 aa21.59■■□□□ 1.05
RPE-208ENST00000436630 CLASP1Q7Z460 1538 aa21.58■■□□□ 1.04
RPE-208ENST00000436630 UGGT2Q9NYU1 1516 aa21.56■■□□□ 1.04
RPE-208ENST00000436630 CLIP1P30622 1438 aa21.54■■□□□ 1.04
RPE-208ENST00000436630 SHROOM2Q13796 1616 aa21.53■■□□□ 1.04
RPE-208ENST00000436630 SAMD9Q5K651 1589 aa21.53■■□□□ 1.04
RPE-208ENST00000436630 AEBP2Q6ZN18 517 aaPredicted RBP21.49■■□□□ 1.03
RPE-208ENST00000436630 ARHGAP35Q9NRY4 1499 aa21.45■■□□□ 1.03
RPE-208ENST00000436630 OSCARQ8IYS5 282 aa21.45■■□□□ 1.02
RPE-208ENST00000436630 KIAA0556O60303 1618 aa21.44■■□□□ 1.02
RPE-208ENST00000436630 CARMIL2Q6F5E8 1435 aa21.42■■□□□ 1.02
RPE-208ENST00000436630 DISP1Q96F81 1524 aa21.4■■□□□ 1.02
RPE-208ENST00000436630 JPH4Q96JJ6 628 aa21.4■■□□□ 1.02
RPE-208ENST00000436630 ARAP1Q96P48 1450 aa21.39■■□□□ 1.01
RPE-208ENST00000436630 RANGAP1P46060 587 aaPredicted RBP21.35■■□□□ 1.01
RPE-208ENST00000436630 PRG4Q92954 1404 aaPredicted RBP21.35■■□□□ 1.01
RPE-208ENST00000436630 FHOD3Q2V2M9 1422 aa21.32■■□□□ 1
RPE-208ENST00000436630 FMN1Q68DA7 1419 aa21.32■■□□□ 1
RPE-208ENST00000436630 VPS8Q8N3P4 1428 aa21.32■■□□□ 1
RPE-208ENST00000436630 ERCC6L2Q5T890 1561 aa21.23■□□□□ 0.99
RPE-208ENST00000436630 FYCO1Q9BQS8 1478 aa21.23■□□□□ 0.99
RPE-208ENST00000436630 PCF11O94913 1555 aaKnown RBP21.23■□□□□ 0.99
RPE-208ENST00000436630 P3H3Q8IVL6 736 aa21.21■□□□□ 0.99
RPE-208ENST00000436630 CASKIN1Q8WXD9 1431 aa21.2■□□□□ 0.98
RPE-208ENST00000436630 HECW1Q76N89 1606 aa21.19■□□□□ 0.98
RPE-208ENST00000436630 RAPGEF6Q8TEU7 1601 aa21.18■□□□□ 0.98
RPE-208ENST00000436630 PTPRGP23470 1445 aa21.18■□□□□ 0.98
RPE-208ENST00000436630 ARHGEF11O15085 1522 aa21.18■□□□□ 0.98
RPE-208ENST00000436630 ABCA8O94911 1581 aa21.15■□□□□ 0.98
RPE-208ENST00000436630 RIMBP3CA6NJZ7 1639 aa21.12■□□□□ 0.97
RPE-208ENST00000436630 RIMBP3BA6NNM3 1639 aa21.12■□□□□ 0.97
RPE-208ENST00000436630 RIMBP3Q9UFD9 1639 aa21.12■□□□□ 0.97
RPE-208ENST00000436630 CFAP43Q8NDM7 1665 aa21.12■□□□□ 0.97
RPE-208ENST00000436630 MAP3K1Q13233 1512 aa21.11■□□□□ 0.97
RPE-208ENST00000436630 CCDC18Q5T9S5 1454 aa21.11■□□□□ 0.97
RPE-208ENST00000436630 ABCC2Q92887 1545 aa21.09■□□□□ 0.97
RPE-208ENST00000436630 UACAQ9BZF9 1416 aa21.09■□□□□ 0.97
RPE-208ENST00000436630 UHRF1BP1LA0JNW5 1464 aa21.08■□□□□ 0.97
RPE-208ENST00000436630 PLB1Q6P1J6 1458 aa21.08■□□□□ 0.97
RPE-208ENST00000436630 NUP153P49790 1475 aaKnown RBP21.06■□□□□ 0.96
RPE-208ENST00000436630 TIAM1Q13009 1591 aa21.06■□□□□ 0.96
RPE-208ENST00000436630 LRRIQ1Q96JM4 1722 aa21.05■□□□□ 0.96
RPE-208ENST00000436630 APLP2Q06481 763 aa21.03■□□□□ 0.96
RPE-208ENST00000436630 EPRSP07814 1512 aaKnown RBP21.03■□□□□ 0.96
RPE-208ENST00000436630 TTBK1Q5TCY1 1321 aaPredicted RBP21.02■□□□□ 0.95
RPE-208ENST00000436630 ADCY10Q96PN6 1610 aa21■□□□□ 0.95
RPE-208ENST00000436630 CDK13Q14004 1512 aaKnown RBP20.95■□□□□ 0.94
RPE-208ENST00000436630 KDM5BQ9UGL1 1544 aa20.95■□□□□ 0.94
RPE-208ENST00000436630 ATP1B4Q9UN42 357 aaPredicted RBP20.95■□□□□ 0.94
RPE-208ENST00000436630 EHBP1L1Q8N3D4 1523 aa20.94■□□□□ 0.94
RPE-208ENST00000436630 ZCCHC11Q5TAX3 1644 aaKnown RBP20.94■□□□□ 0.94
RPE-208ENST00000436630 ATP10BO94823 1461 aa20.92■□□□□ 0.94
RPE-208ENST00000436630 LRRC9Q6ZRR7 1453 aa20.91■□□□□ 0.94
RPE-208ENST00000436630 CDK11AQ9UQ88 783 aaPredicted RBP20.89■□□□□ 0.93
RPE-208ENST00000436630 MTUS2Q5JR59 1369 aa20.86■□□□□ 0.93
RPE-208ENST00000436630 SUPT6HQ7KZ85 1726 aaKnown RBP20.86■□□□□ 0.93
RPE-208ENST00000436630 TROQ12816 1431 aaPredicted RBP20.84■□□□□ 0.93
RPE-208ENST00000436630 MAGI3Q5TCQ9 1506 aa20.83■□□□□ 0.92
RPE-208ENST00000436630 KIF14Q15058 1648 aa20.82■□□□□ 0.92
RPE-208ENST00000436630 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.81■□□□□ 0.92
RPE-208ENST00000436630 HNRNPUL2Q1KMD3 747 aaKnown RBP20.81■□□□□ 0.92
RPE-208ENST00000436630 CYB5RLQ6IPT4 315 aa20.81■□□□□ 0.92
RPE-208ENST00000436630 MAPKBP1O60336 1514 aa20.8■□□□□ 0.92
RPE-208ENST00000436630 NPM1P06748 294 aaKnown RBP eCLIP20.8■□□□□ 0.92
RPE-208ENST00000436630 ARID3CA6NKF2 412 aa20.79■□□□□ 0.92
RPE-208ENST00000436630 PLEKHD1A6NEE1 506 aa20.78■□□□□ 0.92
RPE-208ENST00000436630 WDR7Q9Y4E6 1490 aa20.77■□□□□ 0.92
RPE-208ENST00000436630 KANK4Q5T7N3 995 aaPredicted RBP20.77■□□□□ 0.92
RPE-208ENST00000436630 NCOA2Q15596 1464 aa20.74■□□□□ 0.91
RPE-208ENST00000436630 ASXL2Q76L83 1435 aa20.72■□□□□ 0.91
RPE-208ENST00000436630 ITSN2Q9NZM3 1697 aa20.72■□□□□ 0.91
RPE-208ENST00000436630 PPARGC1BQ86YN6 1023 aaKnown RBP20.66■□□□□ 0.9
RPE-208ENST00000436630 ABCC10Q5T3U5 1492 aa20.66■□□□□ 0.9
RPE-208ENST00000436630 ABCA9Q8IUA7 1624 aa20.66■□□□□ 0.9
RPE-208ENST00000436630 MYO5CQ9NQX4 1742 aa20.65■□□□□ 0.9
RPE-208ENST00000436630 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.64■□□□□ 0.9
RPE-208ENST00000436630 MYOM3Q5VTT5 1437 aa20.64■□□□□ 0.89
RPE-208ENST00000436630 CDC42BPAQ5VT25 1732 aa20.64■□□□□ 0.89
RPE-208ENST00000436630 TTC37Q6PGP7 1564 aa20.63■□□□□ 0.89
RPE-208ENST00000436630 PREX2Q70Z35 1606 aa20.63■□□□□ 0.89
RPE-208ENST00000436630 PHLDB1Q86UU1 1377 aa20.62■□□□□ 0.89
RPE-208ENST00000436630 CCNB3Q8WWL7 1395 aa20.62■□□□□ 0.89
RPE-208ENST00000436630 GLI2P10070 1586 aa20.61■□□□□ 0.89
RPE-208ENST00000436630 ARAP3Q8WWN8 1544 aa20.61■□□□□ 0.89
RPE-208ENST00000436630 MIA2Q96PC5 1412 aa20.61■□□□□ 0.89
RPE-208ENST00000436630 RRBP1Q9P2E9 1410 aaKnown RBP20.61■□□□□ 0.89
RPE-208ENST00000436630 FGD6Q6ZV73 1430 aa20.59■□□□□ 0.89
RPE-208ENST00000436630 DIP2BQ9P265 1576 aa20.59■□□□□ 0.89
RPE-208ENST00000436630 GPATCH8Q9UKJ3 1502 aaKnown RBP20.58■□□□□ 0.88
RPE-208ENST00000436630 PTPN23Q9H3S7 1636 aa20.55■□□□□ 0.88
RPE-208ENST00000436630 CDC42BPBQ9Y5S2 1711 aa20.55■□□□□ 0.88
RPE-208ENST00000436630 KCNH8Q96L42 1107 aa20.54■□□□□ 0.88
RPE-208ENST00000436630 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.54■□□□□ 0.88
RPE-208ENST00000436630 CFAP74Q9C0B2 1584 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms