RNA–Protein interactions for RNA: ENST00000435953.2

AC004448.3-201, humanhuman

TSL 2 BASIC

Gene AC004448.3, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.3-201ENST00000435953 NUP160Q12769 1436 aa15.84■□□□□ 0.13
AC004448.3-201ENST00000435953 JPH4Q96JJ6 628 aa15.82■□□□□ 0.12
AC004448.3-201ENST00000435953 KIAA0586Q9BVV6 1533 aa15.82■□□□□ 0.12
AC004448.3-201ENST00000435953 CEP162Q5TB80 1403 aa15.77■□□□□ 0.12
AC004448.3-201ENST00000435953 CEP170Q5SW79 1584 aa15.76■□□□□ 0.11
AC004448.3-201ENST00000435953 CLIP1P30622 1438 aa15.76■□□□□ 0.11
AC004448.3-201ENST00000435953 P3H3Q8IVL6 736 aa15.75■□□□□ 0.11
AC004448.3-201ENST00000435953 CHD1O14646 1710 aa15.71■□□□□ 0.11
AC004448.3-201ENST00000435953 IQGAP2Q13576 1575 aa15.7■□□□□ 0.1
AC004448.3-201ENST00000435953 ARHGAP35Q9NRY4 1499 aa15.68■□□□□ 0.1
AC004448.3-201ENST00000435953 UGGT2Q9NYU1 1516 aa15.68■□□□□ 0.1
AC004448.3-201ENST00000435953 PRG4Q92954 1404 aaPredicted RBP15.66■□□□□ 0.1
AC004448.3-201ENST00000435953 CLASP1Q7Z460 1538 aa15.65■□□□□ 0.1
AC004448.3-201ENST00000435953 CARMIL2Q6F5E8 1435 aa15.65■□□□□ 0.1
AC004448.3-201ENST00000435953 CTTNBP2Q8WZ74 1663 aa15.64■□□□□ 0.09
AC004448.3-201ENST00000435953 DISP1Q96F81 1524 aa15.63■□□□□ 0.09
AC004448.3-201ENST00000435953 ARAP1Q96P48 1450 aa15.62■□□□□ 0.09
AC004448.3-201ENST00000435953 FHOD3Q2V2M9 1422 aa15.61■□□□□ 0.09
AC004448.3-201ENST00000435953 EFCAB5A4FU69 1503 aa15.61■□□□□ 0.09
AC004448.3-201ENST00000435953 TTBK1Q5TCY1 1321 aaPredicted RBP15.6■□□□□ 0.09
AC004448.3-201ENST00000435953 SAMD9Q5K651 1589 aa15.58■□□□□ 0.08
AC004448.3-201ENST00000435953 PTPRGP23470 1445 aa15.57■□□□□ 0.08
AC004448.3-201ENST00000435953 SHROOM2Q13796 1616 aa15.56■□□□□ 0.08
AC004448.3-201ENST00000435953 FMN1Q68DA7 1419 aa15.55■□□□□ 0.08
AC004448.3-201ENST00000435953 VPS8Q8N3P4 1428 aa15.55■□□□□ 0.08
AC004448.3-201ENST00000435953 ATP1B4Q9UN42 357 aaPredicted RBP15.54■□□□□ 0.08
AC004448.3-201ENST00000435953 KIAA0556O60303 1618 aa15.53■□□□□ 0.08
AC004448.3-201ENST00000435953 ERCC6L2Q5T890 1561 aa15.51■□□□□ 0.07
AC004448.3-201ENST00000435953 APLP2Q06481 763 aa15.49■□□□□ 0.07
AC004448.3-201ENST00000435953 CASKIN1Q8WXD9 1431 aa15.48■□□□□ 0.07
AC004448.3-201ENST00000435953 PLB1Q6P1J6 1458 aa15.44■□□□□ 0.06
AC004448.3-201ENST00000435953 UACAQ9BZF9 1416 aa15.43■□□□□ 0.06
AC004448.3-201ENST00000435953 CYB5RLQ6IPT4 315 aa15.43■□□□□ 0.06
AC004448.3-201ENST00000435953 ARHGEF11O15085 1522 aa15.43■□□□□ 0.06
AC004448.3-201ENST00000435953 ARID3CA6NKF2 412 aa15.42■□□□□ 0.06
AC004448.3-201ENST00000435953 DNAJC5Q9H3Z4 198 aa15.42■□□□□ 0.06
AC004448.3-201ENST00000435953 FYCO1Q9BQS8 1478 aa15.4■□□□□ 0.06
AC004448.3-201ENST00000435953 PPARGC1BQ86YN6 1023 aaKnown RBP15.4■□□□□ 0.06
AC004448.3-201ENST00000435953 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.39■□□□□ 0.05
AC004448.3-201ENST00000435953 HNRNPUL2Q1KMD3 747 aaKnown RBP15.39■□□□□ 0.05
AC004448.3-201ENST00000435953 KANK4Q5T7N3 995 aaPredicted RBP15.39■□□□□ 0.05
AC004448.3-201ENST00000435953 ABCA8O94911 1581 aa15.37■□□□□ 0.05
AC004448.3-201ENST00000435953 NUP153P49790 1475 aaKnown RBP15.37■□□□□ 0.05
AC004448.3-201ENST00000435953 UHRF1BP1LA0JNW5 1464 aa15.36■□□□□ 0.05
AC004448.3-201ENST00000435953 CDK11AQ9UQ88 783 aaPredicted RBP15.36■□□□□ 0.05
AC004448.3-201ENST00000435953 ATP10BO94823 1461 aa15.35■□□□□ 0.05
AC004448.3-201ENST00000435953 NPM1P06748 294 aaKnown RBP eCLIP15.35■□□□□ 0.05
AC004448.3-201ENST00000435953 PCF11O94913 1555 aaKnown RBP15.35■□□□□ 0.05
AC004448.3-201ENST00000435953 EPRSP07814 1512 aaKnown RBP15.34■□□□□ 0.05
AC004448.3-201ENST00000435953 MAP3K1Q13233 1512 aa15.34■□□□□ 0.05
AC004448.3-201ENST00000435953 PLEKHD1A6NEE1 506 aa15.34■□□□□ 0.05
AC004448.3-201ENST00000435953 RAPGEF6Q8TEU7 1601 aa15.34■□□□□ 0.05
AC004448.3-201ENST00000435953 RIMBP3CA6NJZ7 1639 aa15.33■□□□□ 0.04
AC004448.3-201ENST00000435953 RIMBP3BA6NNM3 1639 aa15.33■□□□□ 0.04
AC004448.3-201ENST00000435953 RIMBP3Q9UFD9 1639 aa15.33■□□□□ 0.04
AC004448.3-201ENST00000435953 CCDC18Q5T9S5 1454 aa15.32■□□□□ 0.04
AC004448.3-201ENST00000435953 ABCC2Q92887 1545 aa15.32■□□□□ 0.04
AC004448.3-201ENST00000435953 HECW1Q76N89 1606 aa15.3■□□□□ 0.04
AC004448.3-201ENST00000435953 KDM5BQ9UGL1 1544 aa15.28■□□□□ 0.04
AC004448.3-201ENST00000435953 MTUS2Q5JR59 1369 aa15.28■□□□□ 0.04
AC004448.3-201ENST00000435953 CDK13Q14004 1512 aaKnown RBP15.27■□□□□ 0.04
AC004448.3-201ENST00000435953 LRRC9Q6ZRR7 1453 aa15.27■□□□□ 0.04
AC004448.3-201ENST00000435953 TIAM1Q13009 1591 aa15.27■□□□□ 0.03
AC004448.3-201ENST00000435953 KCNH8Q96L42 1107 aa15.24■□□□□ 0.03
AC004448.3-201ENST00000435953 ADCY10Q96PN6 1610 aa15.24■□□□□ 0.03
AC004448.3-201ENST00000435953 TROQ12816 1431 aaPredicted RBP15.22■□□□□ 0.03
AC004448.3-201ENST00000435953 MAGI3Q5TCQ9 1506 aa15.19■□□□□ 0.02
AC004448.3-201ENST00000435953 ASXL2Q76L83 1435 aa15.17■□□□□ 0.02
AC004448.3-201ENST00000435953 LRRIQ1Q96JM4 1722 aa15.17■□□□□ 0.02
AC004448.3-201ENST00000435953 CFAP43Q8NDM7 1665 aa15.16■□□□□ 0.02
AC004448.3-201ENST00000435953 ZCCHC11Q5TAX3 1644 aaKnown RBP15.15■□□□□ 0.02
AC004448.3-201ENST00000435953 TRIM26Q12899 539 aaPredicted RBP15.15■□□□□ 0.02
AC004448.3-201ENST00000435953 EHBP1L1Q8N3D4 1523 aa15.15■□□□□ 0.02
AC004448.3-201ENST00000435953 NCOA2Q15596 1464 aa15.14■□□□□ 0.01
AC004448.3-201ENST00000435953 PHLDB1Q86UU1 1377 aa15.13■□□□□ 0.01
AC004448.3-201ENST00000435953 WDR7Q9Y4E6 1490 aa15.13■□□□□ 0.01
AC004448.3-201ENST00000435953 CCNB3Q8WWL7 1395 aa15.12■□□□□ 0.01
AC004448.3-201ENST00000435953 CFDP1Q9UEE9 299 aaPredicted RBP15.09■□□□□ 0.01
AC004448.3-201ENST00000435953 ABCC10Q5T3U5 1492 aa15.08■□□□□ 0.01
AC004448.3-201ENST00000435953 MAPKBP1O60336 1514 aa15.07■□□□□ 0
AC004448.3-201ENST00000435953 FAM69CQ0P6D2 419 aa15.07■□□□□ 0
AC004448.3-201ENST00000435953 MYOM3Q5VTT5 1437 aa15.07■□□□□ 0
AC004448.3-201ENST00000435953 GPATCH8Q9UKJ3 1502 aaKnown RBP15.07■□□□□ 0
AC004448.3-201ENST00000435953 SUPT6HQ7KZ85 1726 aaKnown RBP15.06■□□□□ 0
AC004448.3-201ENST00000435953 FAM50AQ14320 339 aaKnown RBP15.05■□□□□ -0
AC004448.3-201ENST00000435953 EFCAB2Q5VUJ9 269 aa15.05■□□□□ -0
AC004448.3-201ENST00000435953 MIA2Q96PC5 1412 aa15.04■□□□□ -0
AC004448.3-201ENST00000435953 RRBP1Q9P2E9 1410 aaKnown RBP15.04■□□□□ -0
AC004448.3-201ENST00000435953 ZNF777Q9ULD5 760 aaPredicted RBP15.04■□□□□ -0
AC004448.3-201ENST00000435953 KIF14Q15058 1648 aa15.03■□□□□ -0
AC004448.3-201ENST00000435953 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.03■□□□□ -0
AC004448.3-201ENST00000435953 PLCH2O75038 1416 aa15.03■□□□□ -0
AC004448.3-201ENST00000435953 FGD6Q6ZV73 1430 aa15.03■□□□□ -0
AC004448.3-201ENST00000435953 ZNF644Q9H582 1327 aaPredicted RBP15.03■□□□□ -0
AC004448.3-201ENST00000435953 PCGF6Q9BYE7 350 aa15.03■□□□□ -0
AC004448.3-201ENST00000435953 CD109Q6YHK3 1445 aa15.01□□□□□ -0.01
AC004448.3-201ENST00000435953 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.01□□□□□ -0.01
AC004448.3-201ENST00000435953 ITGAEP38570 1179 aa14.97□□□□□ -0.01
AC004448.3-201ENST00000435953 HNRNPMP52272 730 aaKnown RBP eCLIP14.97□□□□□ -0.01
AC004448.3-201ENST00000435953 GLI2P10070 1586 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms