RNA–Protein interactions for RNA: ENST00000434684.1

PPARGC1B-205, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best)

Gene PPARGC1B, Length 2,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-205ENST00000434684 RAPGEF2Q9Y4G8 1499 aa20.01■□□□□ 0.79
PPARGC1B-205ENST00000434684 ABCA5Q8WWZ7 1642 aa20■□□□□ 0.79
PPARGC1B-205ENST00000434684 PRXQ9BXM0 1461 aa19.99■□□□□ 0.79
PPARGC1B-205ENST00000434684 MIER1Q8N108 512 aa19.98■□□□□ 0.79
PPARGC1B-205ENST00000434684 CARMIL1Q5VZK9 1371 aa19.97■□□□□ 0.79
PPARGC1B-205ENST00000434684 KIF21BO75037 1637 aa19.95■□□□□ 0.78
PPARGC1B-205ENST00000434684 EIF4G3O43432 1585 aaKnown RBP19.91■□□□□ 0.78
PPARGC1B-205ENST00000434684 RANGAP1P46060 587 aaPredicted RBP19.91■□□□□ 0.78
PPARGC1B-205ENST00000434684 CLIP1P30622 1438 aa19.9■□□□□ 0.78
PPARGC1B-205ENST00000434684 ERICH3Q5RHP9 1530 aa19.9■□□□□ 0.78
PPARGC1B-205ENST00000434684 GRIN2BQ13224 1484 aa19.89■□□□□ 0.77
PPARGC1B-205ENST00000434684 PBRM1Q86U86 1689 aa19.85■□□□□ 0.77
PPARGC1B-205ENST00000434684 APLP2Q06481 763 aa19.83■□□□□ 0.77
PPARGC1B-205ENST00000434684 SNAPC4Q5SXM2 1469 aa19.83■□□□□ 0.76
PPARGC1B-205ENST00000434684 VPS8Q8N3P4 1428 aa19.82■□□□□ 0.76
PPARGC1B-205ENST00000434684 CUL7Q14999 1698 aa19.82■□□□□ 0.76
PPARGC1B-205ENST00000434684 FHAD1B1AJZ9 1412 aa19.79■□□□□ 0.76
PPARGC1B-205ENST00000434684 FBLN2P98095 1184 aa19.77■□□□□ 0.76
PPARGC1B-205ENST00000434684 ADAMTS12P58397 1594 aa19.77■□□□□ 0.75
PPARGC1B-205ENST00000434684 CHMP7Q8WUX9 453 aaPredicted RBP19.73■□□□□ 0.75
PPARGC1B-205ENST00000434684 MAGI1Q96QZ7 1491 aaPredicted RBP19.72■□□□□ 0.75
PPARGC1B-205ENST00000434684 SYNJ2O15056 1496 aa19.67■□□□□ 0.74
PPARGC1B-205ENST00000434684 GRIN2AQ12879 1464 aa19.66■□□□□ 0.74
PPARGC1B-205ENST00000434684 DHX57Q6P158 1386 aaKnown RBP19.61■□□□□ 0.73
PPARGC1B-205ENST00000434684 KANK4Q5T7N3 995 aaPredicted RBP19.59■□□□□ 0.73
PPARGC1B-205ENST00000434684 P3H3Q8IVL6 736 aa19.59■□□□□ 0.73
PPARGC1B-205ENST00000434684 CTTNBP2Q8WZ74 1663 aa19.56■□□□□ 0.72
PPARGC1B-205ENST00000434684 ARHGAP35Q9NRY4 1499 aa19.56■□□□□ 0.72
PPARGC1B-205ENST00000434684 CEP170Q5SW79 1584 aa19.55■□□□□ 0.72
PPARGC1B-205ENST00000434684 CLSPNQ9HAW4 1339 aa19.53■□□□□ 0.72
PPARGC1B-205ENST00000434684 ARAP1Q96P48 1450 aa19.53■□□□□ 0.72
PPARGC1B-205ENST00000434684 NUP160Q12769 1436 aa19.51■□□□□ 0.71
PPARGC1B-205ENST00000434684 CHD1O14646 1710 aa19.51■□□□□ 0.71
PPARGC1B-205ENST00000434684 KIAA0586Q9BVV6 1533 aa19.51■□□□□ 0.71
PPARGC1B-205ENST00000434684 IQGAP2Q13576 1575 aa19.5■□□□□ 0.71
PPARGC1B-205ENST00000434684 FHOD3Q2V2M9 1422 aa19.47■□□□□ 0.71
PPARGC1B-205ENST00000434684 SUPT16HQ9Y5B9 1047 aaKnown RBP19.45■□□□□ 0.7
PPARGC1B-205ENST00000434684 ITGAEP38570 1179 aa19.44■□□□□ 0.7
PPARGC1B-205ENST00000434684 JPH4Q96JJ6 628 aa19.43■□□□□ 0.7
PPARGC1B-205ENST00000434684 EFCAB5A4FU69 1503 aa19.4■□□□□ 0.7
PPARGC1B-205ENST00000434684 RRBP1Q9P2E9 1410 aaKnown RBP19.4■□□□□ 0.7
PPARGC1B-205ENST00000434684 UGGT2Q9NYU1 1516 aa19.39■□□□□ 0.69
PPARGC1B-205ENST00000434684 SAMD9Q5K651 1589 aa19.39■□□□□ 0.69
PPARGC1B-205ENST00000434684 DISP1Q96F81 1524 aa19.36■□□□□ 0.69
PPARGC1B-205ENST00000434684 CCNB3Q8WWL7 1395 aa19.35■□□□□ 0.69
PPARGC1B-205ENST00000434684 ATP1B4Q9UN42 357 aaPredicted RBP19.35■□□□□ 0.69
PPARGC1B-205ENST00000434684 KCNH8Q96L42 1107 aa19.32■□□□□ 0.68
PPARGC1B-205ENST00000434684 PRG4Q92954 1404 aaPredicted RBP19.31■□□□□ 0.68
PPARGC1B-205ENST00000434684 KIAA0556O60303 1618 aa19.3■□□□□ 0.68
PPARGC1B-205ENST00000434684 OSCARQ8IYS5 282 aa19.3■□□□□ 0.68
PPARGC1B-205ENST00000434684 CLASP1Q7Z460 1538 aa19.29■□□□□ 0.68
PPARGC1B-205ENST00000434684 FMN1Q68DA7 1419 aa19.28■□□□□ 0.68
PPARGC1B-205ENST00000434684 CARMIL2Q6F5E8 1435 aa19.27■□□□□ 0.68
PPARGC1B-205ENST00000434684 RAB3GAP2Q9H2M9 1393 aa19.26■□□□□ 0.67
PPARGC1B-205ENST00000434684 PCF11O94913 1555 aaKnown RBP19.26■□□□□ 0.67
PPARGC1B-205ENST00000434684 ERCC6L2Q5T890 1561 aa19.24■□□□□ 0.67
PPARGC1B-205ENST00000434684 ARID3CA6NKF2 412 aa19.24■□□□□ 0.67
PPARGC1B-205ENST00000434684 TSHZ2Q9NRE2 1034 aa19.23■□□□□ 0.67
PPARGC1B-205ENST00000434684 CASKIN1Q8WXD9 1431 aa19.22■□□□□ 0.67
PPARGC1B-205ENST00000434684 SHROOM2Q13796 1616 aa19.22■□□□□ 0.67
PPARGC1B-205ENST00000434684 MAPKBP1O60336 1514 aa19.19■□□□□ 0.66
PPARGC1B-205ENST00000434684 FYCO1Q9BQS8 1478 aa19.19■□□□□ 0.66
PPARGC1B-205ENST00000434684 SIN3AQ96ST3 1273 aa19.17■□□□□ 0.66
PPARGC1B-205ENST00000434684 PLB1Q6P1J6 1458 aa19.17■□□□□ 0.66
PPARGC1B-205ENST00000434684 DDX10Q13206 875 aaKnown RBP19.16■□□□□ 0.66
PPARGC1B-205ENST00000434684 BCANQ96GW7 911 aa19.16■□□□□ 0.66
PPARGC1B-205ENST00000434684 PTPRGP23470 1445 aa19.16■□□□□ 0.66
PPARGC1B-205ENST00000434684 FAM50AQ14320 339 aaKnown RBP19.13■□□□□ 0.65
PPARGC1B-205ENST00000434684 SETD5Q9C0A6 1442 aa19.13■□□□□ 0.65
PPARGC1B-205ENST00000434684 TIAM1Q13009 1591 aa19.11■□□□□ 0.65
PPARGC1B-205ENST00000434684 PHLDB1Q86UU1 1377 aa19.1■□□□□ 0.65
PPARGC1B-205ENST00000434684 HIRIP3Q9BW71 556 aaPredicted RBP19.09■□□□□ 0.65
PPARGC1B-205ENST00000434684 NUP153P49790 1475 aaKnown RBP19.09■□□□□ 0.65
PPARGC1B-205ENST00000434684 CDK13Q14004 1512 aaKnown RBP19.08■□□□□ 0.65
PPARGC1B-205ENST00000434684 LRRIQ1Q96JM4 1722 aa19.08■□□□□ 0.65
PPARGC1B-205ENST00000434684 RAPGEF6Q8TEU7 1601 aa19.08■□□□□ 0.64
PPARGC1B-205ENST00000434684 EPRSP07814 1512 aaKnown RBP19.07■□□□□ 0.64
PPARGC1B-205ENST00000434684 FKBP8Q14318 412 aa19.07■□□□□ 0.64
PPARGC1B-205ENST00000434684 HECW1Q76N89 1606 aa19.07■□□□□ 0.64
PPARGC1B-205ENST00000434684 LRRC9Q6ZRR7 1453 aa19.06■□□□□ 0.64
PPARGC1B-205ENST00000434684 MAP3K1Q13233 1512 aa19.05■□□□□ 0.64
PPARGC1B-205ENST00000434684 ABCA8O94911 1581 aa19.04■□□□□ 0.64
PPARGC1B-205ENST00000434684 CFAP43Q8NDM7 1665 aa19.03■□□□□ 0.64
PPARGC1B-205ENST00000434684 PPP1R15AO75807 674 aaPredicted RBP19.02■□□□□ 0.64
PPARGC1B-205ENST00000434684 UACAQ9BZF9 1416 aa19.02■□□□□ 0.63
PPARGC1B-205ENST00000434684 MTUS2Q5JR59 1369 aa19.01■□□□□ 0.63
PPARGC1B-205ENST00000434684 CCDC18Q5T9S5 1454 aa19.01■□□□□ 0.63
PPARGC1B-205ENST00000434684 MAGI3Q5TCQ9 1506 aa18.99■□□□□ 0.63
PPARGC1B-205ENST00000434684 ANP32EQ9BTT0 268 aa18.99■□□□□ 0.63
PPARGC1B-205ENST00000434684 TRIM52Q96A61 297 aa18.97■□□□□ 0.63
PPARGC1B-205ENST00000434684 ATP10BO94823 1461 aa18.97■□□□□ 0.63
PPARGC1B-205ENST00000434684 ARHGEF11O15085 1522 aa18.95■□□□□ 0.62
PPARGC1B-205ENST00000434684 BCL11AQ9H165 835 aa18.95■□□□□ 0.62
PPARGC1B-205ENST00000434684 ABCC2Q92887 1545 aa18.93■□□□□ 0.62
PPARGC1B-205ENST00000434684 ANP32CO43423 234 aa18.92■□□□□ 0.62
PPARGC1B-205ENST00000434684 CDK11AQ9UQ88 783 aaPredicted RBP18.92■□□□□ 0.62
PPARGC1B-205ENST00000434684 TIMELESSQ9UNS1 1208 aa18.91■□□□□ 0.62
PPARGC1B-205ENST00000434684 NEFLP07196 543 aa18.9■□□□□ 0.62
PPARGC1B-205ENST00000434684 EHBP1L1Q8N3D4 1523 aa18.89■□□□□ 0.62
PPARGC1B-205ENST00000434684 CYB5RLQ6IPT4 315 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms