RNA–Protein interactions for RNA: ENST00000434684.1

PPARGC1B-205, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best)

Gene PPARGC1B, Length 2,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-205ENST00000434684 NISCHQ9Y2I1 1504 aa28.43■■■□□ 2.14
PPARGC1B-205ENST00000434684 CCDC180Q9P1Z9 1646 aa24.78■■□□□ 1.56
PPARGC1B-205ENST00000434684 ABCC9O60706 1549 aa23.88■■□□□ 1.41
PPARGC1B-205ENST00000434684 ZCCHC6Q5VYS8 1495 aaKnown RBP23.82■■□□□ 1.4
PPARGC1B-205ENST00000434684 DCAF8L2P0C7V8 631 aa23.77■■□□□ 1.4
PPARGC1B-205ENST00000434684 DCAF1Q9Y4B6 1507 aa23.4■■□□□ 1.34
PPARGC1B-205ENST00000434684 SHROOM4Q9ULL8 1493 aa23.26■■□□□ 1.31
PPARGC1B-205ENST00000434684 MYO15BQ96JP2 1530 aa23.2■■□□□ 1.3
PPARGC1B-205ENST00000434684 NACADO15069 1562 aa23.19■■□□□ 1.3
PPARGC1B-205ENST00000434684 RB1CC1Q8TDY2 1594 aa23.07■■□□□ 1.28
PPARGC1B-205ENST00000434684 SUPT5HO00267 1087 aaKnown RBP22.98■■□□□ 1.27
PPARGC1B-205ENST00000434684 SCRIBQ14160 1630 aa22.92■■□□□ 1.26
PPARGC1B-205ENST00000434684 UNC13AQ9UPW8 1703 aa22.58■■□□□ 1.21
PPARGC1B-205ENST00000434684 PABPN1Q86U42 306 aaKnown RBP eCLIP22.55■■□□□ 1.2
PPARGC1B-205ENST00000434684 BICRAQ9NZM4 1560 aa22.43■■□□□ 1.18
PPARGC1B-205ENST00000434684 CHIC1Q5VXU3 224 aa22.41■■□□□ 1.18
PPARGC1B-205ENST00000434684 HRCP23327 699 aa22.33■■□□□ 1.16
PPARGC1B-205ENST00000434684 CECR2Q9BXF3 1484 aa22.2■■□□□ 1.14
PPARGC1B-205ENST00000434684 PCGF6Q9BYE7 350 aa22.17■■□□□ 1.14
PPARGC1B-205ENST00000434684 RSF1Q96T23 1441 aaPredicted RBP22.01■■□□□ 1.11
PPARGC1B-205ENST00000434684 MROH2BQ7Z745 1585 aa22.01■■□□□ 1.11
PPARGC1B-205ENST00000434684 PPARGC1BQ86YN6 1023 aaKnown RBP21.96■■□□□ 1.11
PPARGC1B-205ENST00000434684 BAZ1AQ9NRL2 1556 aaPredicted RBP21.94■■□□□ 1.1
PPARGC1B-205ENST00000434684 SMARCA4P51532 1647 aa21.89■■□□□ 1.09
PPARGC1B-205ENST00000434684 LOC105371045A0A1W2PR82 267 aa21.88■■□□□ 1.09
PPARGC1B-205ENST00000434684 WIZO95785 1651 aa21.79■■□□□ 1.08
PPARGC1B-205ENST00000434684 EIF4G1Q04637 1599 aaKnown RBP21.77■■□□□ 1.08
PPARGC1B-205ENST00000434684 ATAD2BQ9ULI0 1458 aa21.63■■□□□ 1.05
PPARGC1B-205ENST00000434684 PEG3Q9GZU2 1588 aa21.58■■□□□ 1.04
PPARGC1B-205ENST00000434684 TRIM26Q12899 539 aaPredicted RBP21.55■■□□□ 1.04
PPARGC1B-205ENST00000434684 SMARCA2P51531 1590 aa21.55■■□□□ 1.04
PPARGC1B-205ENST00000434684 CC2D2AQ9P2K1 1620 aa21.52■■□□□ 1.04
PPARGC1B-205ENST00000434684 TOP2AP11388 1531 aaKnown RBP21.51■■□□□ 1.03
PPARGC1B-205ENST00000434684 BAZ1BQ9UIG0 1483 aaKnown RBP21.49■■□□□ 1.03
PPARGC1B-205ENST00000434684 NCAPD3P42695 1498 aa21.45■■□□□ 1.03
PPARGC1B-205ENST00000434684 DNAJC5BQ9UF47 199 aa21.37■■□□□ 1.01
PPARGC1B-205ENST00000434684 HMGXB3Q12766 1538 aa21.35■■□□□ 1.01
PPARGC1B-205ENST00000434684 CCDC88BA6NC98 1476 aa21.35■■□□□ 1.01
PPARGC1B-205ENST00000434684 TRIM41Q8WV44 630 aa21.29■■□□□ 1
PPARGC1B-205ENST00000434684 FAM9AQ8IZU1 332 aaPredicted RBP21.27■■□□□ 1
PPARGC1B-205ENST00000434684 EHMT2Q96KQ7 1210 aa21.18■□□□□ 0.98
PPARGC1B-205ENST00000434684 ZEB1P37275 1124 aaPredicted RBP21.16■□□□□ 0.98
PPARGC1B-205ENST00000434684 PELP1Q8IZL8 1130 aaKnown RBP21.09■□□□□ 0.97
PPARGC1B-205ENST00000434684 CADPSQ9ULU8 1353 aa20.93■□□□□ 0.94
PPARGC1B-205ENST00000434684 CFTRP13569 1480 aa20.92■□□□□ 0.94
PPARGC1B-205ENST00000434684 NESP48681 1621 aa20.89■□□□□ 0.94
PPARGC1B-205ENST00000434684 ABCC8Q09428 1581 aa20.86■□□□□ 0.93
PPARGC1B-205ENST00000434684 SCAF1Q9H7N4 1312 aaKnown RBP20.85■□□□□ 0.93
PPARGC1B-205ENST00000434684 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.73■□□□□ 0.91
PPARGC1B-205ENST00000434684 LAMC3Q9Y6N6 1575 aa20.72■□□□□ 0.91
PPARGC1B-205ENST00000434684 WRNQ14191 1432 aaPredicted RBP eCLIP20.71■□□□□ 0.91
PPARGC1B-205ENST00000434684 FANCD2Q9BXW9 1451 aa20.7■□□□□ 0.9
PPARGC1B-205ENST00000434684 CCER1Q8TC90 406 aaPredicted RBP20.66■□□□□ 0.9
PPARGC1B-205ENST00000434684 PRDM2Q13029 1718 aa20.65■□□□□ 0.9
PPARGC1B-205ENST00000434684 SYNJ1O43426 1573 aa20.63■□□□□ 0.89
PPARGC1B-205ENST00000434684 PDS5BQ9NTI5 1447 aa20.62■□□□□ 0.89
PPARGC1B-205ENST00000434684 CUX1P39880 1505 aa20.58■□□□□ 0.88
PPARGC1B-205ENST00000434684 CEP164Q9UPV0 1460 aa20.57■□□□□ 0.88
PPARGC1B-205ENST00000434684 TTBK1Q5TCY1 1321 aaPredicted RBP20.57■□□□□ 0.88
PPARGC1B-205ENST00000434684 KIF21AQ7Z4S6 1674 aa20.53■□□□□ 0.88
PPARGC1B-205ENST00000434684 TOP2BQ02880 1626 aa20.51■□□□□ 0.87
PPARGC1B-205ENST00000434684 ACIN1Q9UKV3 1341 aaKnown RBP20.49■□□□□ 0.87
PPARGC1B-205ENST00000434684 NEUROD1Q13562 356 aa20.48■□□□□ 0.87
PPARGC1B-205ENST00000434684 URB2Q14146 1524 aaKnown RBP20.46■□□□□ 0.87
PPARGC1B-205ENST00000434684 ERCC6Q03468 1493 aa20.46■□□□□ 0.87
PPARGC1B-205ENST00000434684 BIVM-ERCC5R4GMW8 1640 aa20.46■□□□□ 0.87
PPARGC1B-205ENST00000434684 SOGA1O94964 1423 aa20.44■□□□□ 0.86
PPARGC1B-205ENST00000434684 TOPBP1Q92547 1522 aa20.44■□□□□ 0.86
PPARGC1B-205ENST00000434684 DIEXFQ68CQ4 756 aaKnown RBP20.43■□□□□ 0.86
PPARGC1B-205ENST00000434684 DNMBPQ6XZF7 1577 aa20.41■□□□□ 0.86
PPARGC1B-205ENST00000434684 FGD5Q6ZNL6 1462 aa20.4■□□□□ 0.86
PPARGC1B-205ENST00000434684 RUSC2Q8N2Y8 1516 aa20.39■□□□□ 0.86
PPARGC1B-205ENST00000434684 MRC2Q9UBG0 1479 aa20.37■□□□□ 0.85
PPARGC1B-205ENST00000434684 CEP162Q5TB80 1403 aa20.35■□□□□ 0.85
PPARGC1B-205ENST00000434684 POLA1P09884 1462 aaPredicted RBP20.33■□□□□ 0.85
PPARGC1B-205ENST00000434684 RAD54L2Q9Y4B4 1467 aa20.32■□□□□ 0.84
PPARGC1B-205ENST00000434684 GTF3C3Q9Y5Q9 886 aa20.31■□□□□ 0.84
PPARGC1B-205ENST00000434684 MYT1Q01538 1121 aa20.29■□□□□ 0.84
PPARGC1B-205ENST00000434684 CENPBP07199 599 aaPredicted RBP20.27■□□□□ 0.84
PPARGC1B-205ENST00000434684 UBTFP17480 764 aaKnown RBP20.26■□□□□ 0.83
PPARGC1B-205ENST00000434684 TNIKQ9UKE5 1360 aa20.25■□□□□ 0.83
PPARGC1B-205ENST00000434684 WDR62O43379 1518 aa20.25■□□□□ 0.83
PPARGC1B-205ENST00000434684 THOC2Q8NI27 1593 aaKnown RBP20.25■□□□□ 0.83
PPARGC1B-205ENST00000434684 CUX2O14529 1486 aa20.24■□□□□ 0.83
PPARGC1B-205ENST00000434684 CSRNP3Q8WYN3 585 aa20.24■□□□□ 0.83
PPARGC1B-205ENST00000434684 EEA1Q15075 1411 aa20.19■□□□□ 0.82
PPARGC1B-205ENST00000434684 KIF27Q86VH2 1401 aa20.19■□□□□ 0.82
PPARGC1B-205ENST00000434684 TDRD9Q8NDG6 1382 aaKnown RBP20.17■□□□□ 0.82
PPARGC1B-205ENST00000434684 ABCA10Q8WWZ4 1543 aa20.17■□□□□ 0.82
PPARGC1B-205ENST00000434684 ZNF316A6NFI3 1004 aaPredicted RBP20.16■□□□□ 0.82
PPARGC1B-205ENST00000434684 TARBP1Q13395 1621 aaKnown RBP20.12■□□□□ 0.81
PPARGC1B-205ENST00000434684 YTHDC1Q96MU7 727 aaKnown RBP20.09■□□□□ 0.81
PPARGC1B-205ENST00000434684 IGF1RP08069 1367 aa20.08■□□□□ 0.81
PPARGC1B-205ENST00000434684 ZNF608Q9ULD9 1512 aaPredicted RBP20.07■□□□□ 0.8
PPARGC1B-205ENST00000434684 HNRNPUL2Q1KMD3 747 aaKnown RBP20.07■□□□□ 0.8
PPARGC1B-205ENST00000434684 IFT140Q96RY7 1462 aa20.07■□□□□ 0.8
PPARGC1B-205ENST00000434684 AQRO60306 1485 aaKnown RBP eCLIP20.07■□□□□ 0.82e-6■■■■□ 22.8
PPARGC1B-205ENST00000434684 GOLGA3Q08378 1498 aa20.07■□□□□ 0.8
PPARGC1B-205ENST00000434684 WDR97A6NE52 1622 aa20.06■□□□□ 0.8
PPARGC1B-205ENST00000434684 GAPVD1Q14C86 1478 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 172.9 ms