RNA–Protein interactions for RNA: ENST00000434436.7

MBD3-202, Transcript of methyl-CpG binding domain protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MBD3, Length 2,439 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-202ENST00000434436 RRBP1Q9P2E9 1410 aaKnown RBP35.78■■■■□ 3.32
MBD3-202ENST00000434436 FHAD1B1AJZ9 1412 aa35.74■■■■□ 3.31
MBD3-202ENST00000434436 EFCAB5A4FU69 1503 aa35.74■■■■□ 3.31
MBD3-202ENST00000434436 P3H3Q8IVL6 736 aa35.73■■■■□ 3.31
MBD3-202ENST00000434436 PCF11O94913 1555 aaKnown RBP35.7■■■■□ 3.31
MBD3-202ENST00000434436 FHOD3Q2V2M9 1422 aa35.69■■■■□ 3.3
MBD3-202ENST00000434436 MRC2Q9UBG0 1479 aa35.69■■■■□ 3.3
MBD3-202ENST00000434436 CFAP43Q8NDM7 1665 aa35.63■■■■□ 3.29
MBD3-202ENST00000434436 LRRC9Q6ZRR7 1453 aa35.62■■■■□ 3.29
MBD3-202ENST00000434436 CCNB3Q8WWL7 1395 aa35.6■■■■□ 3.29
MBD3-202ENST00000434436 PBRM1Q86U86 1689 aa35.58■■■■□ 3.29
MBD3-202ENST00000434436 FYCO1Q9BQS8 1478 aa35.55■■■■□ 3.28
MBD3-202ENST00000434436 AQRO60306 1485 aaKnown RBP eCLIP35.55■■■■□ 3.286e-7■■■■□ 21.9
MBD3-202ENST00000434436 CASKIN1Q8WXD9 1431 aa35.53■■■■□ 3.28
MBD3-202ENST00000434436 SAMD9Q5K651 1589 aa35.52■■■■□ 3.28
MBD3-202ENST00000434436 WDR62O43379 1518 aa35.46■■■■□ 3.27
MBD3-202ENST00000434436 FMN1Q68DA7 1419 aa35.45■■■■□ 3.27
MBD3-202ENST00000434436 ATP1B4Q9UN42 357 aaPredicted RBP35.45■■■■□ 3.27
MBD3-202ENST00000434436 PHLDB1Q86UU1 1377 aa35.42■■■■□ 3.26
MBD3-202ENST00000434436 SNAPC4Q5SXM2 1469 aa35.42■■■■□ 3.26
MBD3-202ENST00000434436 ADAMTS12P58397 1594 aa35.41■■■■□ 3.26
MBD3-202ENST00000434436 DHX57Q6P158 1386 aaKnown RBP35.39■■■■□ 3.26
MBD3-202ENST00000434436 IFT140Q96RY7 1462 aa35.38■■■■□ 3.25
MBD3-202ENST00000434436 GRIN2BQ13224 1484 aa35.37■■■■□ 3.25
MBD3-202ENST00000434436 ZNF608Q9ULD9 1512 aaPredicted RBP35.34■■■■□ 3.25
MBD3-202ENST00000434436 ITGAEP38570 1179 aa35.31■■■■□ 3.24
MBD3-202ENST00000434436 CLSPNQ9HAW4 1339 aa35.29■■■■□ 3.24
MBD3-202ENST00000434436 LRRIQ1Q96JM4 1722 aa35.29■■■■□ 3.24
MBD3-202ENST00000434436 IQGAP2Q13576 1575 aa35.24■■■■□ 3.23
MBD3-202ENST00000434436 ERCC6Q03468 1493 aa35.22■■■■□ 3.23
MBD3-202ENST00000434436 ZNF316A6NFI3 1004 aaPredicted RBP35.2■■■■□ 3.23
MBD3-202ENST00000434436 THOC2Q8NI27 1593 aaKnown RBP35.19■■■■□ 3.22
MBD3-202ENST00000434436 DIEXFQ68CQ4 756 aaKnown RBP35.18■■■■□ 3.22
MBD3-202ENST00000434436 FAM50AQ14320 339 aaKnown RBP35.15■■■■□ 3.22
MBD3-202ENST00000434436 EIF4G3O43432 1585 aaKnown RBP35.15■■■■□ 3.22
MBD3-202ENST00000434436 RAB3GAP2Q9H2M9 1393 aa35.14■■■■□ 3.22
MBD3-202ENST00000434436 MTUS2Q5JR59 1369 aa35.1■■■■□ 3.21
MBD3-202ENST00000434436 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.08■■■■□ 3.212e-7■■□□□ 13.7
MBD3-202ENST00000434436 SETD5Q9C0A6 1442 aa35.08■■■■□ 3.21
MBD3-202ENST00000434436 UGGT2Q9NYU1 1516 aa35.06■■■■□ 3.2
MBD3-202ENST00000434436 FGD6Q6ZV73 1430 aa35.03■■■■□ 3.2
MBD3-202ENST00000434436 EHBP1L1Q8N3D4 1523 aa35■■■■□ 3.19
MBD3-202ENST00000434436 KIAA0586Q9BVV6 1533 aa34.99■■■■□ 3.19
MBD3-202ENST00000434436 GRIN2AQ12879 1464 aa34.99■■■■□ 3.19
MBD3-202ENST00000434436 HECW1Q76N89 1606 aa34.99■■■■□ 3.19
MBD3-202ENST00000434436 NCOA2Q15596 1464 aa34.99■■■■□ 3.19
MBD3-202ENST00000434436 CCDC18Q5T9S5 1454 aa34.98■■■■□ 3.19
MBD3-202ENST00000434436 SUPT6HQ7KZ85 1726 aaKnown RBP34.98■■■■□ 3.19
MBD3-202ENST00000434436 MAGI3Q5TCQ9 1506 aa34.97■■■■□ 3.19
MBD3-202ENST00000434436 MAPKBP1O60336 1514 aa34.93■■■■□ 3.18
MBD3-202ENST00000434436 MAGI1Q96QZ7 1491 aaPredicted RBP34.92■■■■□ 3.18
MBD3-202ENST00000434436 MYOM3Q5VTT5 1437 aa34.9■■■■□ 3.18
MBD3-202ENST00000434436 EPRSP07814 1512 aaKnown RBP34.89■■■■□ 3.18
MBD3-202ENST00000434436 ARHGEF11O15085 1522 aa34.89■■■■□ 3.18
MBD3-202ENST00000434436 DISP1Q96F81 1524 aa34.89■■■■□ 3.18
MBD3-202ENST00000434436 KIAA0556O60303 1618 aa34.89■■■■□ 3.18
MBD3-202ENST00000434436 CDK13Q14004 1512 aaKnown RBP34.82■■■■□ 3.17
MBD3-202ENST00000434436 SYNJ2O15056 1496 aa34.82■■■■□ 3.17
MBD3-202ENST00000434436 PTPRKQ15262 1439 aa34.79■■■■□ 3.16
MBD3-202ENST00000434436 CEP170Q5SW79 1584 aa34.79■■■■□ 3.16
MBD3-202ENST00000434436 PTPN23Q9H3S7 1636 aa34.77■■■■□ 3.16
MBD3-202ENST00000434436 CHMP7Q8WUX9 453 aaPredicted RBP34.76■■■■□ 3.16
MBD3-202ENST00000434436 HFM1A2PYH4 1435 aa34.68■■■■□ 3.14
MBD3-202ENST00000434436 ARID3CA6NKF2 412 aa34.68■■■■□ 3.14
MBD3-202ENST00000434436 RAPGEF6Q8TEU7 1601 aa34.67■■■■□ 3.14
MBD3-202ENST00000434436 TCOF1Q13428 1488 aaKnown RBP34.67■■■■□ 3.14
MBD3-202ENST00000434436 NUP153P49790 1475 aaKnown RBP34.65■■■■□ 3.14
MBD3-202ENST00000434436 NUP160Q12769 1436 aa34.65■■■■□ 3.14
MBD3-202ENST00000434436 FBLN2P98095 1184 aa34.65■■■■□ 3.14
MBD3-202ENST00000434436 NAIPQ13075 1403 aa34.6■■■■□ 3.13
MBD3-202ENST00000434436 SIN3AQ96ST3 1273 aa34.57■■■■□ 3.13
MBD3-202ENST00000434436 MIA2Q96PC5 1412 aa34.56■■■■□ 3.12
MBD3-202ENST00000434436 MIER1Q8N108 512 aa34.53■■■■□ 3.12
MBD3-202ENST00000434436 JPH4Q96JJ6 628 aa34.51■■■■□ 3.12
MBD3-202ENST00000434436 UACAQ9BZF9 1416 aa34.5■■■■□ 3.11
MBD3-202ENST00000434436 NEUROD1Q13562 356 aa34.49■■■■□ 3.11
MBD3-202ENST00000434436 PLB1Q6P1J6 1458 aa34.48■■■■□ 3.11
MBD3-202ENST00000434436 CARMIL2Q6F5E8 1435 aa34.47■■■■□ 3.11
MBD3-202ENST00000434436 GCC2Q8IWJ2 1684 aa34.44■■■■□ 3.1
MBD3-202ENST00000434436 TIMELESSQ9UNS1 1208 aa34.41■■■■□ 3.1
MBD3-202ENST00000434436 CDK11AQ9UQ88 783 aaPredicted RBP34.41■■■■□ 3.1
MBD3-202ENST00000434436 CHIC2Q9UKJ5 165 aa34.4■■■■□ 3.1
MBD3-202ENST00000434436 ACIN1Q9UKV3 1341 aaKnown RBP34.39■■■■□ 3.1
MBD3-202ENST00000434436 AKNAQ7Z591 1439 aa34.39■■■■□ 3.1
MBD3-202ENST00000434436 RRP7BPQ9NSQ0 103 aa34.39■■■■□ 3.1
MBD3-202ENST00000434436 SCAF1Q9H7N4 1312 aaKnown RBP34.38■■■■□ 3.09
MBD3-202ENST00000434436 TROQ12816 1431 aaPredicted RBP34.36■■■■□ 3.09
MBD3-202ENST00000434436 PRG4Q92954 1404 aaPredicted RBP34.36■■■■□ 3.09
MBD3-202ENST00000434436 KDM6BO15054 1643 aa34.32■■■■□ 3.08
MBD3-202ENST00000434436 CENPBP07199 599 aaPredicted RBP34.31■■■■□ 3.08
MBD3-202ENST00000434436 ABCA8O94911 1581 aa34.3■■■■□ 3.08
MBD3-202ENST00000434436 DNMT1P26358 1616 aaKnown RBP34.29■■■■□ 3.08
MBD3-202ENST00000434436 ADCY10Q96PN6 1610 aa34.29■■■■□ 3.08
MBD3-202ENST00000434436 DAPK1P53355 1430 aa34.28■■■■□ 3.08
MBD3-202ENST00000434436 ZNF644Q9H582 1327 aaPredicted RBP34.27■■■■□ 3.08
MBD3-202ENST00000434436 KIF14Q15058 1648 aa34.26■■■■□ 3.07
MBD3-202ENST00000434436 PPP1R15AO75807 674 aaPredicted RBP34.25■■■■□ 3.07
MBD3-202ENST00000434436 ABCC5O15440 1437 aa34.25■■■■□ 3.07
MBD3-202ENST00000434436 CHD1O14646 1710 aa34.24■■■■□ 3.07
MBD3-202ENST00000434436 ITSN2Q9NZM3 1697 aa34.21■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms