RNA–Protein interactions for RNA: ENST00000434013.6

NPC2-202, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2 BASIC

Gene NPC2, Length 875 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-202ENST00000434013 IGF1RP08069 1367 aa18.43■□□□□ 0.54
NPC2-202ENST00000434013 PRG4Q92954 1404 aaPredicted RBP18.42■□□□□ 0.54
NPC2-202ENST00000434013 JPH4Q96JJ6 628 aa18.42■□□□□ 0.54
NPC2-202ENST00000434013 RUSC2Q8N2Y8 1516 aa18.4■□□□□ 0.54
NPC2-202ENST00000434013 CARMIL1Q5VZK9 1371 aa18.35■□□□□ 0.53
NPC2-202ENST00000434013 KIAA0586Q9BVV6 1533 aa18.33■□□□□ 0.53
NPC2-202ENST00000434013 MAPKBP1O60336 1514 aa18.33■□□□□ 0.52
NPC2-202ENST00000434013 ABCC10Q5T3U5 1492 aa18.31■□□□□ 0.52
NPC2-202ENST00000434013 EEA1Q15075 1411 aa18.3■□□□□ 0.52
NPC2-202ENST00000434013 RAPGEF2Q9Y4G8 1499 aa18.27■□□□□ 0.52
NPC2-202ENST00000434013 NPM1P06748 294 aaKnown RBP eCLIP18.24■□□□□ 0.51
NPC2-202ENST00000434013 PRXQ9BXM0 1461 aa18.22■□□□□ 0.51
NPC2-202ENST00000434013 FAM9AQ8IZU1 332 aaPredicted RBP18.21■□□□□ 0.51
NPC2-202ENST00000434013 CSRNP3Q8WYN3 585 aa18.21■□□□□ 0.51
NPC2-202ENST00000434013 KIF13AQ9H1H9 1805 aa18.19■□□□□ 0.5
NPC2-202ENST00000434013 FAM69CQ0P6D2 419 aa18.18■□□□□ 0.5
NPC2-202ENST00000434013 ADCY10Q96PN6 1610 aa18.18■□□□□ 0.5
NPC2-202ENST00000434013 DIP2BQ9P265 1576 aa18.17■□□□□ 0.5
NPC2-202ENST00000434013 IQGAP2Q13576 1575 aa18.15■□□□□ 0.5
NPC2-202ENST00000434013 PTPRGP23470 1445 aa18.14■□□□□ 0.49
NPC2-202ENST00000434013 CARMIL2Q6F5E8 1435 aa18.14■□□□□ 0.49
NPC2-202ENST00000434013 CTTNBP2Q8WZ74 1663 aa18.13■□□□□ 0.49
NPC2-202ENST00000434013 TNIKQ9UKE5 1360 aa18.13■□□□□ 0.49
NPC2-202ENST00000434013 UHRF1BP1LA0JNW5 1464 aa18.11■□□□□ 0.49
NPC2-202ENST00000434013 KIF21BO75037 1637 aa18.1■□□□□ 0.49
NPC2-202ENST00000434013 ABCC2Q92887 1545 aa18.1■□□□□ 0.49
NPC2-202ENST00000434013 PLB1Q6P1J6 1458 aa18.07■□□□□ 0.48
NPC2-202ENST00000434013 GLI2P10070 1586 aa18.04■□□□□ 0.48
NPC2-202ENST00000434013 UGGT2Q9NYU1 1516 aa18.03■□□□□ 0.48
NPC2-202ENST00000434013 UACAQ9BZF9 1416 aa18.01■□□□□ 0.47
NPC2-202ENST00000434013 DISP1Q96F81 1524 aa18.01■□□□□ 0.47
NPC2-202ENST00000434013 KDM6BO15054 1643 aa18.01■□□□□ 0.47
NPC2-202ENST00000434013 GOLGA3Q08378 1498 aa18.01■□□□□ 0.47
NPC2-202ENST00000434013 ASXL2Q76L83 1435 aa17.99■□□□□ 0.47
NPC2-202ENST00000434013 KDM5BQ9UGL1 1544 aa17.99■□□□□ 0.47
NPC2-202ENST00000434013 EHMT2Q96KQ7 1210 aa17.98■□□□□ 0.47
NPC2-202ENST00000434013 KIAA0556O60303 1618 aa17.97■□□□□ 0.47
NPC2-202ENST00000434013 KDM4FA0A1W2PPD8 638 aa17.94■□□□□ 0.46
NPC2-202ENST00000434013 UBTFP17480 764 aaKnown RBP17.93■□□□□ 0.46
NPC2-202ENST00000434013 TTBK1Q5TCY1 1321 aaPredicted RBP17.93■□□□□ 0.46
NPC2-202ENST00000434013 EPRSP07814 1512 aaKnown RBP17.92■□□□□ 0.46
NPC2-202ENST00000434013 TEX14Q8IWB6 1497 aa17.88■□□□□ 0.45
NPC2-202ENST00000434013 RANGAP1P46060 587 aaPredicted RBP17.88■□□□□ 0.45
NPC2-202ENST00000434013 SAMD9Q5K651 1589 aa17.87■□□□□ 0.45
NPC2-202ENST00000434013 PPRC1Q5VV67 1664 aaKnown RBP17.85■□□□□ 0.45
NPC2-202ENST00000434013 EFCAB5A4FU69 1503 aa17.84■□□□□ 0.45
NPC2-202ENST00000434013 SENP3Q9H4L4 574 aaPredicted RBP17.84■□□□□ 0.45
NPC2-202ENST00000434013 MAP3K4Q9Y6R4 1608 aa17.83■□□□□ 0.45
NPC2-202ENST00000434013 WDR7Q9Y4E6 1490 aa17.83■□□□□ 0.45
NPC2-202ENST00000434013 COL17A1Q9UMD9 1497 aaPredicted RBP17.82■□□□□ 0.44
NPC2-202ENST00000434013 P3H3Q8IVL6 736 aa17.82■□□□□ 0.44
NPC2-202ENST00000434013 PHF23Q9BUL5 403 aaPredicted RBP17.8■□□□□ 0.44
NPC2-202ENST00000434013 MAGI3Q5TCQ9 1506 aa17.79■□□□□ 0.44
NPC2-202ENST00000434013 ZCCHC11Q5TAX3 1644 aaKnown RBP17.78■□□□□ 0.44
NPC2-202ENST00000434013 FHOD3Q2V2M9 1422 aa17.78■□□□□ 0.44
NPC2-202ENST00000434013 ABCA8O94911 1581 aa17.76■□□□□ 0.43
NPC2-202ENST00000434013 TSPOAP1O95153 1857 aa17.75■□□□□ 0.43
NPC2-202ENST00000434013 ADGRL1O94910 1474 aa17.75■□□□□ 0.43
NPC2-202ENST00000434013 ARHGAP35Q9NRY4 1499 aa17.73■□□□□ 0.43
NPC2-202ENST00000434013 CD109Q6YHK3 1445 aa17.71■□□□□ 0.43
NPC2-202ENST00000434013 RAPGEF6Q8TEU7 1601 aa17.7■□□□□ 0.42
NPC2-202ENST00000434013 PHLDB1Q86UU1 1377 aa17.69■□□□□ 0.42
NPC2-202ENST00000434013 CLIP1P30622 1438 aa17.68■□□□□ 0.42
NPC2-202ENST00000434013 CFAP43Q8NDM7 1665 aa17.67■□□□□ 0.42
NPC2-202ENST00000434013 FMN1Q68DA7 1419 aa17.65■□□□□ 0.42
NPC2-202ENST00000434013 LOC105371045A0A1W2PR82 267 aa17.65■□□□□ 0.42
NPC2-202ENST00000434013 ARAP3Q8WWN8 1544 aa17.65■□□□□ 0.42
NPC2-202ENST00000434013 CEP162Q5TB80 1403 aa17.63■□□□□ 0.41
NPC2-202ENST00000434013 ARID3CA6NKF2 412 aa17.62■□□□□ 0.41
NPC2-202ENST00000434013 ATP10BO94823 1461 aa17.61■□□□□ 0.41
NPC2-202ENST00000434013 NUP153P49790 1475 aaKnown RBP17.61■□□□□ 0.41
NPC2-202ENST00000434013 HECW1Q76N89 1606 aa17.59■□□□□ 0.41
NPC2-202ENST00000434013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.56■□□□□ 0.4
NPC2-202ENST00000434013 HNRNPUL2Q1KMD3 747 aaKnown RBP17.56■□□□□ 0.4
NPC2-202ENST00000434013 KCNH8Q96L42 1107 aa17.56■□□□□ 0.4
NPC2-202ENST00000434013 NEO1Q92859 1461 aa17.56■□□□□ 0.4
NPC2-202ENST00000434013 PCF11O94913 1555 aaKnown RBP17.55■□□□□ 0.4
NPC2-202ENST00000434013 ATP1B4Q9UN42 357 aaPredicted RBP17.55■□□□□ 0.4
NPC2-202ENST00000434013 ABCA9Q8IUA7 1624 aa17.54■□□□□ 0.4
NPC2-202ENST00000434013 CASKIN1Q8WXD9 1431 aa17.52■□□□□ 0.4
NPC2-202ENST00000434013 HECW2Q9P2P5 1572 aa17.52■□□□□ 0.39
NPC2-202ENST00000434013 CDK13Q14004 1512 aaKnown RBP17.52■□□□□ 0.39
NPC2-202ENST00000434013 FYCO1Q9BQS8 1478 aa17.5■□□□□ 0.39
NPC2-202ENST00000434013 ILDR1Q86SU0 546 aaPredicted RBP17.48■□□□□ 0.39
NPC2-202ENST00000434013 CCDC18Q5T9S5 1454 aa17.47■□□□□ 0.39
NPC2-202ENST00000434013 LRRIQ1Q96JM4 1722 aa17.47■□□□□ 0.39
NPC2-202ENST00000434013 PLEKHD1A6NEE1 506 aa17.45■□□□□ 0.38
NPC2-202ENST00000434013 CDK11AQ9UQ88 783 aaPredicted RBP17.41■□□□□ 0.38
NPC2-202ENST00000434013 VPS8Q8N3P4 1428 aa17.4■□□□□ 0.38
NPC2-202ENST00000434013 PTPRMP28827 1452 aa17.4■□□□□ 0.38
NPC2-202ENST00000434013 ADAMTSL3P82987 1691 aa17.39■□□□□ 0.37
NPC2-202ENST00000434013 FRMPD1Q5SYB0 1578 aa17.38■□□□□ 0.37
NPC2-202ENST00000434013 RAPGEF3O95398 923 aa17.38■□□□□ 0.37
NPC2-202ENST00000434013 TROQ12816 1431 aaPredicted RBP17.38■□□□□ 0.37
NPC2-202ENST00000434013 DENND4BO75064 1496 aaPredicted RBP17.37■□□□□ 0.37
NPC2-202ENST00000434013 KIF14Q15058 1648 aa17.36■□□□□ 0.37
NPC2-202ENST00000434013 MAGI2Q86UL8 1455 aa17.36■□□□□ 0.37
NPC2-202ENST00000434013 ZMYM4Q5VZL5 1548 aa17.35■□□□□ 0.37
NPC2-202ENST00000434013 ARHGEF40Q8TER5 1519 aa17.35■□□□□ 0.37
NPC2-202ENST00000434013 FANCAO15360 1455 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms