RNA–Protein interactions for RNA: ENST00000434013.6

NPC2-202, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2 BASIC

Gene NPC2, Length 875 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-202ENST00000434013 NISCHQ9Y2I1 1504 aa26.34■■□□□ 1.81
NPC2-202ENST00000434013 CCDC180Q9P1Z9 1646 aa23.59■■□□□ 1.37
NPC2-202ENST00000434013 ABCC9O60706 1549 aa23.58■■□□□ 1.36
NPC2-202ENST00000434013 RB1CC1Q8TDY2 1594 aa22.51■■□□□ 1.19
NPC2-202ENST00000434013 NACADO15069 1562 aa22.4■■□□□ 1.18
NPC2-202ENST00000434013 DNAJC5BQ9UF47 199 aa22.25■■□□□ 1.15
NPC2-202ENST00000434013 MYO15BQ96JP2 1530 aa22.21■■□□□ 1.15
NPC2-202ENST00000434013 ZCCHC6Q5VYS8 1495 aaKnown RBP21.98■■□□□ 1.11
NPC2-202ENST00000434013 DCAF8L2P0C7V8 631 aa21.96■■□□□ 1.11
NPC2-202ENST00000434013 PABPN1Q86U42 306 aaKnown RBP eCLIP21.9■■□□□ 1.1
NPC2-202ENST00000434013 BICRAQ9NZM4 1560 aa21.83■■□□□ 1.09
NPC2-202ENST00000434013 DCAF1Q9Y4B6 1507 aa21.82■■□□□ 1.08
NPC2-202ENST00000434013 SHROOM4Q9ULL8 1493 aa21.79■■□□□ 1.08
NPC2-202ENST00000434013 UNC13AQ9UPW8 1703 aa21.75■■□□□ 1.07
NPC2-202ENST00000434013 SCRIBQ14160 1630 aa21.37■■□□□ 1.01
NPC2-202ENST00000434013 CECR2Q9BXF3 1484 aa21.34■■□□□ 1.01
NPC2-202ENST00000434013 CC2D2AQ9P2K1 1620 aa21.32■■□□□ 1
NPC2-202ENST00000434013 EIF4G1Q04637 1599 aaKnown RBP21.31■■□□□ 1
NPC2-202ENST00000434013 AEBP2Q6ZN18 517 aaPredicted RBP21.01■□□□□ 0.95
NPC2-202ENST00000434013 NCAPD3P42695 1498 aa20.73■□□□□ 0.91
NPC2-202ENST00000434013 DNAJC5Q9H3Z4 198 aa20.65■□□□□ 0.9
NPC2-202ENST00000434013 CUX2O14529 1486 aa20.57■□□□□ 0.88
NPC2-202ENST00000434013 ATAD2BQ9ULI0 1458 aa20.56■□□□□ 0.88
NPC2-202ENST00000434013 HMGXB3Q12766 1538 aa20.53■□□□□ 0.88
NPC2-202ENST00000434013 SMARCA2P51531 1590 aa20.51■□□□□ 0.87
NPC2-202ENST00000434013 BAZ1AQ9NRL2 1556 aaPredicted RBP20.43■□□□□ 0.86
NPC2-202ENST00000434013 SMARCA4P51532 1647 aa20.43■□□□□ 0.86
NPC2-202ENST00000434013 ERCC6Q03468 1493 aa20.4■□□□□ 0.86
NPC2-202ENST00000434013 PEG3Q9GZU2 1588 aa20.39■□□□□ 0.85
NPC2-202ENST00000434013 BAZ1BQ9UIG0 1483 aaKnown RBP20.3■□□□□ 0.84
NPC2-202ENST00000434013 MROH2BQ7Z745 1585 aa20.29■□□□□ 0.84
NPC2-202ENST00000434013 CHIC1Q5VXU3 224 aa20.25■□□□□ 0.83
NPC2-202ENST00000434013 NESP48681 1621 aa20.2■□□□□ 0.82
NPC2-202ENST00000434013 LAMC3Q9Y6N6 1575 aa20.2■□□□□ 0.82
NPC2-202ENST00000434013 PDS5BQ9NTI5 1447 aa20.11■□□□□ 0.81
NPC2-202ENST00000434013 THOC2Q8NI27 1593 aaKnown RBP20.11■□□□□ 0.81
NPC2-202ENST00000434013 WIZO95785 1651 aa20.1■□□□□ 0.81
NPC2-202ENST00000434013 RSF1Q96T23 1441 aaPredicted RBP20.09■□□□□ 0.81
NPC2-202ENST00000434013 CADPSQ9ULU8 1353 aa20.04■□□□□ 0.8
NPC2-202ENST00000434013 MRC2Q9UBG0 1479 aa19.91■□□□□ 0.78
NPC2-202ENST00000434013 TOP2AP11388 1531 aaKnown RBP19.91■□□□□ 0.78
NPC2-202ENST00000434013 WDR62O43379 1518 aa19.88■□□□□ 0.77
NPC2-202ENST00000434013 KIF21AQ7Z4S6 1674 aa19.87■□□□□ 0.77
NPC2-202ENST00000434013 CFTRP13569 1480 aa19.8■□□□□ 0.76
NPC2-202ENST00000434013 CEP164Q9UPV0 1460 aa19.78■□□□□ 0.76
NPC2-202ENST00000434013 FANCD2Q9BXW9 1451 aa19.74■□□□□ 0.75
NPC2-202ENST00000434013 SUPT5HO00267 1087 aaKnown RBP19.7■□□□□ 0.74
NPC2-202ENST00000434013 CCDC88BA6NC98 1476 aa19.64■□□□□ 0.73
NPC2-202ENST00000434013 URB2Q14146 1524 aaKnown RBP19.56■□□□□ 0.72
NPC2-202ENST00000434013 OSCARQ8IYS5 282 aa19.53■□□□□ 0.72
NPC2-202ENST00000434013 PRDM2Q13029 1718 aa19.48■□□□□ 0.71
NPC2-202ENST00000434013 TRIM41Q8WV44 630 aa19.45■□□□□ 0.7
NPC2-202ENST00000434013 IFT140Q96RY7 1462 aa19.44■□□□□ 0.7
NPC2-202ENST00000434013 ABCC8Q09428 1581 aa19.41■□□□□ 0.7
NPC2-202ENST00000434013 TOPBP1Q92547 1522 aa19.35■□□□□ 0.69
NPC2-202ENST00000434013 ZNF608Q9ULD9 1512 aaPredicted RBP19.3■□□□□ 0.68
NPC2-202ENST00000434013 DNMBPQ6XZF7 1577 aa19.27■□□□□ 0.68
NPC2-202ENST00000434013 ARHGEF11O15085 1522 aa19.19■□□□□ 0.66
NPC2-202ENST00000434013 EIF4G3O43432 1585 aaKnown RBP19.19■□□□□ 0.66
NPC2-202ENST00000434013 RIMBP3CA6NJZ7 1639 aa19.18■□□□□ 0.66
NPC2-202ENST00000434013 RIMBP3BA6NNM3 1639 aa19.18■□□□□ 0.66
NPC2-202ENST00000434013 RIMBP3Q9UFD9 1639 aa19.18■□□□□ 0.66
NPC2-202ENST00000434013 TARBP1Q13395 1621 aaKnown RBP19.17■□□□□ 0.66
NPC2-202ENST00000434013 POLA1P09884 1462 aaPredicted RBP19.16■□□□□ 0.66
NPC2-202ENST00000434013 WDR97A6NE52 1622 aa19.12■□□□□ 0.65
NPC2-202ENST00000434013 AQRO60306 1485 aaKnown RBP eCLIP19.11■□□□□ 0.65
NPC2-202ENST00000434013 SOGA1O94964 1423 aa19.05■□□□□ 0.64
NPC2-202ENST00000434013 CUX1P39880 1505 aa19.05■□□□□ 0.64
NPC2-202ENST00000434013 RAD54L2Q9Y4B4 1467 aa19■□□□□ 0.63
NPC2-202ENST00000434013 ARAP1Q96P48 1450 aa18.99■□□□□ 0.63
NPC2-202ENST00000434013 MAGI1Q96QZ7 1491 aaPredicted RBP18.99■□□□□ 0.63
NPC2-202ENST00000434013 FGD5Q6ZNL6 1462 aa18.98■□□□□ 0.63
NPC2-202ENST00000434013 TDRD9Q8NDG6 1382 aaKnown RBP18.98■□□□□ 0.63
NPC2-202ENST00000434013 CYB5RLQ6IPT4 315 aa18.97■□□□□ 0.63
NPC2-202ENST00000434013 WRNQ14191 1432 aaPredicted RBP eCLIP18.97■□□□□ 0.63
NPC2-202ENST00000434013 GRIN2BQ13224 1484 aa18.95■□□□□ 0.62
NPC2-202ENST00000434013 SNAPC4Q5SXM2 1469 aa18.94■□□□□ 0.62
NPC2-202ENST00000434013 CLASP1Q7Z460 1538 aa18.94■□□□□ 0.62
NPC2-202ENST00000434013 CHD1O14646 1710 aa18.94■□□□□ 0.62
NPC2-202ENST00000434013 BIVM-ERCC5R4GMW8 1640 aa18.92■□□□□ 0.62
NPC2-202ENST00000434013 SYNJ1O43426 1573 aa18.92■□□□□ 0.62
NPC2-202ENST00000434013 TOP2BQ02880 1626 aa18.92■□□□□ 0.62
NPC2-202ENST00000434013 FBLN2P98095 1184 aa18.91■□□□□ 0.62
NPC2-202ENST00000434013 SYNJ2O15056 1496 aa18.9■□□□□ 0.62
NPC2-202ENST00000434013 CHMP7Q8WUX9 453 aaPredicted RBP18.87■□□□□ 0.61
NPC2-202ENST00000434013 ABCA10Q8WWZ4 1543 aa18.85■□□□□ 0.61
NPC2-202ENST00000434013 GAPVD1Q14C86 1478 aa18.83■□□□□ 0.6
NPC2-202ENST00000434013 ABCA5Q8WWZ7 1642 aa18.76■□□□□ 0.59
NPC2-202ENST00000434013 TRHP20396 242 aaPredicted RBP18.75■□□□□ 0.59
NPC2-202ENST00000434013 NUP160Q12769 1436 aa18.69■□□□□ 0.58
NPC2-202ENST00000434013 GRIN2AQ12879 1464 aa18.69■□□□□ 0.58
NPC2-202ENST00000434013 PBRM1Q86U86 1689 aa18.69■□□□□ 0.58
NPC2-202ENST00000434013 FHAD1B1AJZ9 1412 aa18.64■□□□□ 0.57
NPC2-202ENST00000434013 ADAMTS12P58397 1594 aa18.62■□□□□ 0.57
NPC2-202ENST00000434013 ERICH3Q5RHP9 1530 aa18.61■□□□□ 0.57
NPC2-202ENST00000434013 KIF27Q86VH2 1401 aa18.57■□□□□ 0.56
NPC2-202ENST00000434013 SHROOM2Q13796 1616 aa18.56■□□□□ 0.56
NPC2-202ENST00000434013 CEP170Q5SW79 1584 aa18.55■□□□□ 0.56
NPC2-202ENST00000434013 ERCC6L2Q5T890 1561 aa18.49■□□□□ 0.55
NPC2-202ENST00000434013 CUL7Q14999 1698 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms