RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 ADAMTS12P58397 1594 aa22.26■■□□□ 1.15
CALD1-207ENST00000430085 ARAP1Q96P48 1450 aa22.23■■□□□ 1.15
CALD1-207ENST00000430085 SYNJ2O15056 1496 aa22.22■■□□□ 1.15
CALD1-207ENST00000430085 FBLN2P98095 1184 aa22.21■■□□□ 1.15
CALD1-207ENST00000430085 FHAD1B1AJZ9 1412 aa22.2■■□□□ 1.14
CALD1-207ENST00000430085 ARHGAP35Q9NRY4 1499 aa22.2■■□□□ 1.14
CALD1-207ENST00000430085 CHMP7Q8WUX9 453 aaPredicted RBP22.18■■□□□ 1.14
CALD1-207ENST00000430085 CTTNBP2Q8WZ74 1663 aa22.17■■□□□ 1.14
CALD1-207ENST00000430085 APLP2Q06481 763 aa22.17■■□□□ 1.14
CALD1-207ENST00000430085 TTBK1Q5TCY1 1321 aaPredicted RBP22.13■■□□□ 1.13
CALD1-207ENST00000430085 GRIN2AQ12879 1464 aa22.13■■□□□ 1.13
CALD1-207ENST00000430085 OSCARQ8IYS5 282 aa22.08■■□□□ 1.13
CALD1-207ENST00000430085 EFCAB5A4FU69 1503 aa22.06■■□□□ 1.12
CALD1-207ENST00000430085 CEP170Q5SW79 1584 aa22.04■■□□□ 1.12
CALD1-207ENST00000430085 NUP160Q12769 1436 aa22■■□□□ 1.11
CALD1-207ENST00000430085 P3H3Q8IVL6 736 aa21.98■■□□□ 1.11
CALD1-207ENST00000430085 CLASP1Q7Z460 1538 aa21.98■■□□□ 1.11
CALD1-207ENST00000430085 FHOD3Q2V2M9 1422 aa21.96■■□□□ 1.11
CALD1-207ENST00000430085 HRCP23327 699 aa21.94■■□□□ 1.1
CALD1-207ENST00000430085 SAMD9Q5K651 1589 aa21.93■■□□□ 1.1
CALD1-207ENST00000430085 IQGAP2Q13576 1575 aa21.92■■□□□ 1.1
CALD1-207ENST00000430085 FMN1Q68DA7 1419 aa21.89■■□□□ 1.09
CALD1-207ENST00000430085 PCF11O94913 1555 aaKnown RBP21.88■■□□□ 1.09
CALD1-207ENST00000430085 DNAJC5Q9H3Z4 198 aa21.88■■□□□ 1.09
CALD1-207ENST00000430085 MAP3K1Q13233 1512 aa21.87■■□□□ 1.09
CALD1-207ENST00000430085 KIAA0586Q9BVV6 1533 aa21.87■■□□□ 1.09
CALD1-207ENST00000430085 KANK4Q5T7N3 995 aaPredicted RBP21.86■■□□□ 1.09
CALD1-207ENST00000430085 FYCO1Q9BQS8 1478 aa21.85■■□□□ 1.09
CALD1-207ENST00000430085 TIAM1Q13009 1591 aa21.84■■□□□ 1.09
CALD1-207ENST00000430085 CASKIN1Q8WXD9 1431 aa21.83■■□□□ 1.09
CALD1-207ENST00000430085 SHROOM2Q13796 1616 aa21.83■■□□□ 1.09
CALD1-207ENST00000430085 ATP1B4Q9UN42 357 aaPredicted RBP21.82■■□□□ 1.08
CALD1-207ENST00000430085 UGGT2Q9NYU1 1516 aa21.8■■□□□ 1.08
CALD1-207ENST00000430085 CFAP43Q8NDM7 1665 aa21.79■■□□□ 1.08
CALD1-207ENST00000430085 JPH4Q96JJ6 628 aa21.78■■□□□ 1.08
CALD1-207ENST00000430085 ARHGEF11O15085 1522 aa21.76■■□□□ 1.07
CALD1-207ENST00000430085 RIMBP3CA6NJZ7 1639 aa21.76■■□□□ 1.07
CALD1-207ENST00000430085 RIMBP3BA6NNM3 1639 aa21.76■■□□□ 1.07
CALD1-207ENST00000430085 RIMBP3Q9UFD9 1639 aa21.76■■□□□ 1.07
CALD1-207ENST00000430085 ERCC6L2Q5T890 1561 aa21.75■■□□□ 1.07
CALD1-207ENST00000430085 LRRC9Q6ZRR7 1453 aa21.74■■□□□ 1.07
CALD1-207ENST00000430085 PRG4Q92954 1404 aaPredicted RBP21.73■■□□□ 1.07
CALD1-207ENST00000430085 KIAA0556O60303 1618 aa21.69■■□□□ 1.06
CALD1-207ENST00000430085 DISP1Q96F81 1524 aa21.67■■□□□ 1.06
CALD1-207ENST00000430085 RRBP1Q9P2E9 1410 aaKnown RBP21.65■■□□□ 1.06
CALD1-207ENST00000430085 ZEB1P37275 1124 aaPredicted RBP21.65■■□□□ 1.06
CALD1-207ENST00000430085 HNRNPUL2Q1KMD3 747 aaKnown RBP21.65■■□□□ 1.06
CALD1-207ENST00000430085 HECW1Q76N89 1606 aa21.63■■□□□ 1.05
CALD1-207ENST00000430085 LRRIQ1Q96JM4 1722 aa21.62■■□□□ 1.05
CALD1-207ENST00000430085 CARMIL2Q6F5E8 1435 aa21.61■■□□□ 1.05
CALD1-207ENST00000430085 CCDC18Q5T9S5 1454 aa21.61■■□□□ 1.05
CALD1-207ENST00000430085 CCNB3Q8WWL7 1395 aa21.59■■□□□ 1.05
CALD1-207ENST00000430085 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.59■■□□□ 1.05
CALD1-207ENST00000430085 MTUS2Q5JR59 1369 aa21.58■■□□□ 1.05
CALD1-207ENST00000430085 CCER1Q8TC90 406 aaPredicted RBP21.57■■□□□ 1.04
CALD1-207ENST00000430085 PHLDB1Q86UU1 1377 aa21.55■■□□□ 1.04
CALD1-207ENST00000430085 CYB5RLQ6IPT4 315 aa21.54■■□□□ 1.04
CALD1-207ENST00000430085 EPRSP07814 1512 aaKnown RBP21.53■■□□□ 1.04
CALD1-207ENST00000430085 EHBP1L1Q8N3D4 1523 aa21.52■■□□□ 1.04
CALD1-207ENST00000430085 RAPGEF6Q8TEU7 1601 aa21.51■■□□□ 1.03
CALD1-207ENST00000430085 PTPRGP23470 1445 aa21.49■■□□□ 1.03
CALD1-207ENST00000430085 SUPT6HQ7KZ85 1726 aaKnown RBP21.48■■□□□ 1.03
CALD1-207ENST00000430085 CDK13Q14004 1512 aaKnown RBP21.47■■□□□ 1.03
CALD1-207ENST00000430085 NUP153P49790 1475 aaKnown RBP21.45■■□□□ 1.02
CALD1-207ENST00000430085 MAGI3Q5TCQ9 1506 aa21.44■■□□□ 1.02
CALD1-207ENST00000430085 NCOA2Q15596 1464 aa21.44■■□□□ 1.02
CALD1-207ENST00000430085 ARID3CA6NKF2 412 aa21.44■■□□□ 1.02
CALD1-207ENST00000430085 FAM50AQ14320 339 aaKnown RBP21.43■■□□□ 1.02
CALD1-207ENST00000430085 ITGAEP38570 1179 aa21.42■■□□□ 1.02
CALD1-207ENST00000430085 PLB1Q6P1J6 1458 aa21.41■■□□□ 1.02
CALD1-207ENST00000430085 ADCY10Q96PN6 1610 aa21.4■■□□□ 1.02
CALD1-207ENST00000430085 FGD6Q6ZV73 1430 aa21.39■■□□□ 1.02
CALD1-207ENST00000430085 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.38■■□□□ 1.01
CALD1-207ENST00000430085 MYOM3Q5VTT5 1437 aa21.38■■□□□ 1.01
CALD1-207ENST00000430085 CDK11AQ9UQ88 783 aaPredicted RBP21.37■■□□□ 1.01
CALD1-207ENST00000430085 UACAQ9BZF9 1416 aa21.36■■□□□ 1.01
CALD1-207ENST00000430085 ABCA8O94911 1581 aa21.36■■□□□ 1.01
CALD1-207ENST00000430085 ABCC2Q92887 1545 aa21.34■■□□□ 1.01
CALD1-207ENST00000430085 UHRF1BP1LA0JNW5 1464 aa21.32■■□□□ 1
CALD1-207ENST00000430085 PTPN23Q9H3S7 1636 aa21.28■■□□□ 1
CALD1-207ENST00000430085 TROQ12816 1431 aaPredicted RBP21.27■■□□□ 1
CALD1-207ENST00000430085 MIA2Q96PC5 1412 aa21.24■□□□□ 0.99
CALD1-207ENST00000430085 ZCCHC11Q5TAX3 1644 aaKnown RBP21.24■□□□□ 0.99
CALD1-207ENST00000430085 SETD5Q9C0A6 1442 aa21.23■□□□□ 0.99
CALD1-207ENST00000430085 KDM5BQ9UGL1 1544 aa21.23■□□□□ 0.99
CALD1-207ENST00000430085 ATP10BO94823 1461 aa21.22■□□□□ 0.99
CALD1-207ENST00000430085 TCOF1Q13428 1488 aaKnown RBP21.22■□□□□ 0.99
CALD1-207ENST00000430085 NPM1P06748 294 aaKnown RBP eCLIP21.21■□□□□ 0.99
CALD1-207ENST00000430085 RAB3GAP2Q9H2M9 1393 aa21.21■□□□□ 0.99
CALD1-207ENST00000430085 PLEKHD1A6NEE1 506 aa21.19■□□□□ 0.98
CALD1-207ENST00000430085 DHX57Q6P158 1386 aaKnown RBP21.19■□□□□ 0.98
CALD1-207ENST00000430085 KIF14Q15058 1648 aa21.16■□□□□ 0.98
CALD1-207ENST00000430085 CLSPNQ9HAW4 1339 aa21.15■□□□□ 0.98
CALD1-207ENST00000430085 MAPKBP1O60336 1514 aa21.15■□□□□ 0.98
CALD1-207ENST00000430085 ITSN2Q9NZM3 1697 aa21.14■□□□□ 0.97
CALD1-207ENST00000430085 PTPRKQ15262 1439 aa21.13■□□□□ 0.97
CALD1-207ENST00000430085 ASXL2Q76L83 1435 aa21.11■□□□□ 0.97
CALD1-207ENST00000430085 HFM1A2PYH4 1435 aa21.09■□□□□ 0.97
CALD1-207ENST00000430085 CFDP1Q9UEE9 299 aaPredicted RBP21.08■□□□□ 0.97
CALD1-207ENST00000430085 GPATCH8Q9UKJ3 1502 aaKnown RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms