RNA–Protein interactions for RNA: ENST00000429586.6

ABCF3-203, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ABCF3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-203ENST00000429586 SNAPC4Q5SXM2 1469 aa26.42■■□□□ 1.82
ABCF3-203ENST00000429586 FHAD1B1AJZ9 1412 aa26.41■■□□□ 1.82
ABCF3-203ENST00000429586 ARAP1Q96P48 1450 aa26.38■■□□□ 1.81
ABCF3-203ENST00000429586 ARHGAP35Q9NRY4 1499 aa26.38■■□□□ 1.81
ABCF3-203ENST00000429586 VPS8Q8N3P4 1428 aa26.34■■□□□ 1.81
ABCF3-203ENST00000429586 SCAF1Q9H7N4 1312 aaKnown RBP26.34■■□□□ 1.81
ABCF3-203ENST00000429586 TTBK1Q5TCY1 1321 aaPredicted RBP26.33■■□□□ 1.81
ABCF3-203ENST00000429586 P3H3Q8IVL6 736 aa26.3■■□□□ 1.8
ABCF3-203ENST00000429586 MAGI1Q96QZ7 1491 aaPredicted RBP26.27■■□□□ 1.8
ABCF3-203ENST00000429586 FBLN2P98095 1184 aa26.26■■□□□ 1.79
ABCF3-203ENST00000429586 GRIN2AQ12879 1464 aa26.23■■□□□ 1.79
ABCF3-203ENST00000429586 CHMP7Q8WUX9 453 aaPredicted RBP26.21■■□□□ 1.79
ABCF3-203ENST00000429586 TRIM26Q12899 539 aaPredicted RBP26.2■■□□□ 1.78
ABCF3-203ENST00000429586 SYNJ2O15056 1496 aa26.2■■□□□ 1.78
ABCF3-203ENST00000429586 FHOD3Q2V2M9 1422 aa26.18■■□□□ 1.78
ABCF3-203ENST00000429586 IQGAP2Q13576 1575 aa26.16■■□□□ 1.78
ABCF3-203ENST00000429586 EFCAB5A4FU69 1503 aa26.14■■□□□ 1.78
ABCF3-203ENST00000429586 CEP170Q5SW79 1584 aa26.11■■□□□ 1.77
ABCF3-203ENST00000429586 APLP2Q06481 763 aa26.11■■□□□ 1.77
ABCF3-203ENST00000429586 SAMD9Q5K651 1589 aa26.1■■□□□ 1.77
ABCF3-203ENST00000429586 KIAA0586Q9BVV6 1533 aa26.05■■□□□ 1.76
ABCF3-203ENST00000429586 CHD1O14646 1710 aa26.05■■□□□ 1.76
ABCF3-203ENST00000429586 PCF11O94913 1555 aaKnown RBP26.03■■□□□ 1.76
ABCF3-203ENST00000429586 ATP1B4Q9UN42 357 aaPredicted RBP26.01■■□□□ 1.76
ABCF3-203ENST00000429586 NUP160Q12769 1436 aa25.98■■□□□ 1.75
ABCF3-203ENST00000429586 ZEB1P37275 1124 aaPredicted RBP25.98■■□□□ 1.75
ABCF3-203ENST00000429586 UGGT2Q9NYU1 1516 aa25.97■■□□□ 1.75
ABCF3-203ENST00000429586 KANK4Q5T7N3 995 aaPredicted RBP25.97■■□□□ 1.75
ABCF3-203ENST00000429586 FMN1Q68DA7 1419 aa25.92■■□□□ 1.74
ABCF3-203ENST00000429586 DISP1Q96F81 1524 aa25.91■■□□□ 1.74
ABCF3-203ENST00000429586 KIAA0556O60303 1618 aa25.9■■□□□ 1.74
ABCF3-203ENST00000429586 CASKIN1Q8WXD9 1431 aa25.88■■□□□ 1.73
ABCF3-203ENST00000429586 TIAM1Q13009 1591 aa25.88■■□□□ 1.73
ABCF3-203ENST00000429586 FYCO1Q9BQS8 1478 aa25.88■■□□□ 1.73
ABCF3-203ENST00000429586 JPH4Q96JJ6 628 aa25.86■■□□□ 1.73
ABCF3-203ENST00000429586 LRRIQ1Q96JM4 1722 aa25.84■■□□□ 1.73
ABCF3-203ENST00000429586 CFAP43Q8NDM7 1665 aa25.82■■□□□ 1.72
ABCF3-203ENST00000429586 MAP3K1Q13233 1512 aa25.77■■□□□ 1.72
ABCF3-203ENST00000429586 ARID3CA6NKF2 412 aa25.76■■□□□ 1.71
ABCF3-203ENST00000429586 LRRC9Q6ZRR7 1453 aa25.75■■□□□ 1.71
ABCF3-203ENST00000429586 CARMIL2Q6F5E8 1435 aa25.73■■□□□ 1.71
ABCF3-203ENST00000429586 PRG4Q92954 1404 aaPredicted RBP25.71■■□□□ 1.71
ABCF3-203ENST00000429586 HECW1Q76N89 1606 aa25.7■■□□□ 1.7
ABCF3-203ENST00000429586 CDK13Q14004 1512 aaKnown RBP25.65■■□□□ 1.7
ABCF3-203ENST00000429586 SHROOM2Q13796 1616 aa25.64■■□□□ 1.7
ABCF3-203ENST00000429586 RAPGEF6Q8TEU7 1601 aa25.64■■□□□ 1.7
ABCF3-203ENST00000429586 PLB1Q6P1J6 1458 aa25.64■■□□□ 1.7
ABCF3-203ENST00000429586 ACIN1Q9UKV3 1341 aaKnown RBP25.64■■□□□ 1.69
ABCF3-203ENST00000429586 ERCC6L2Q5T890 1561 aa25.63■■□□□ 1.69
ABCF3-203ENST00000429586 CLASP1Q7Z460 1538 aa25.63■■□□□ 1.69
ABCF3-203ENST00000429586 EPRSP07814 1512 aaKnown RBP25.63■■□□□ 1.69
ABCF3-203ENST00000429586 MTUS2Q5JR59 1369 aa25.61■■□□□ 1.69
ABCF3-203ENST00000429586 NUP153P49790 1475 aaKnown RBP25.59■■□□□ 1.69
ABCF3-203ENST00000429586 CCDC18Q5T9S5 1454 aa25.59■■□□□ 1.69
ABCF3-203ENST00000429586 MAGI3Q5TCQ9 1506 aa25.59■■□□□ 1.69
ABCF3-203ENST00000429586 HNRNPUL2Q1KMD3 747 aaKnown RBP25.59■■□□□ 1.69
ABCF3-203ENST00000429586 PHLDB1Q86UU1 1377 aa25.58■■□□□ 1.69
ABCF3-203ENST00000429586 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.53■■□□□ 1.68
ABCF3-203ENST00000429586 PTPRGP23470 1445 aa25.52■■□□□ 1.68
ABCF3-203ENST00000429586 RRBP1Q9P2E9 1410 aaKnown RBP25.51■■□□□ 1.68
ABCF3-203ENST00000429586 EHBP1L1Q8N3D4 1523 aa25.5■■□□□ 1.67
ABCF3-203ENST00000429586 ABCA8O94911 1581 aa25.49■■□□□ 1.67
ABCF3-203ENST00000429586 CCNB3Q8WWL7 1395 aa25.49■■□□□ 1.67
ABCF3-203ENST00000429586 SUPT6HQ7KZ85 1726 aaKnown RBP25.47■■□□□ 1.67
ABCF3-203ENST00000429586 NEUROD1Q13562 356 aa25.47■■□□□ 1.67
ABCF3-203ENST00000429586 NCOA2Q15596 1464 aa25.46■■□□□ 1.67
ABCF3-203ENST00000429586 ITGAEP38570 1179 aa25.44■■□□□ 1.66
ABCF3-203ENST00000429586 OSCARQ8IYS5 282 aa25.42■■□□□ 1.66
ABCF3-203ENST00000429586 FAM50AQ14320 339 aaKnown RBP25.4■■□□□ 1.66
ABCF3-203ENST00000429586 ATP10BO94823 1461 aa25.36■■□□□ 1.65
ABCF3-203ENST00000429586 GTF3C3Q9Y5Q9 886 aa25.35■■□□□ 1.65
ABCF3-203ENST00000429586 UACAQ9BZF9 1416 aa25.35■■□□□ 1.65
ABCF3-203ENST00000429586 FGD6Q6ZV73 1430 aa25.35■■□□□ 1.65
ABCF3-203ENST00000429586 ARHGEF11O15085 1522 aa25.34■■□□□ 1.65
ABCF3-203ENST00000429586 CDK11AQ9UQ88 783 aaPredicted RBP25.34■■□□□ 1.65
ABCF3-203ENST00000429586 MYOM3Q5VTT5 1437 aa25.33■■□□□ 1.65
ABCF3-203ENST00000429586 TROQ12816 1431 aaPredicted RBP25.29■■□□□ 1.64
ABCF3-203ENST00000429586 KIF14Q15058 1648 aa25.29■■□□□ 1.64
ABCF3-203ENST00000429586 ABCC2Q92887 1545 aa25.28■■□□□ 1.64
ABCF3-203ENST00000429586 CENPBP07199 599 aaPredicted RBP25.26■■□□□ 1.63
ABCF3-203ENST00000429586 CCER1Q8TC90 406 aaPredicted RBP25.25■■□□□ 1.63
ABCF3-203ENST00000429586 PLEKHD1A6NEE1 506 aa25.24■■□□□ 1.63
ABCF3-203ENST00000429586 PTPN23Q9H3S7 1636 aa25.24■■□□□ 1.63
ABCF3-203ENST00000429586 ADCY10Q96PN6 1610 aa25.2■■□□□ 1.62
ABCF3-203ENST00000429586 ZCCHC11Q5TAX3 1644 aaKnown RBP25.17■■□□□ 1.62
ABCF3-203ENST00000429586 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.15■■□□□ 1.62
ABCF3-203ENST00000429586 UHRF1BP1LA0JNW5 1464 aa25.14■■□□□ 1.61
ABCF3-203ENST00000429586 ZNF644Q9H582 1327 aaPredicted RBP25.12■■□□□ 1.61
ABCF3-203ENST00000429586 PTPRKQ15262 1439 aa25.11■■□□□ 1.61
ABCF3-203ENST00000429586 MIA2Q96PC5 1412 aa25.11■■□□□ 1.61
ABCF3-203ENST00000429586 TCOF1Q13428 1488 aaKnown RBP25.11■■□□□ 1.61
ABCF3-203ENST00000429586 GPATCH8Q9UKJ3 1502 aaKnown RBP25.1■■□□□ 1.61
ABCF3-203ENST00000429586 CDC42BPAQ5VT25 1732 aa25.1■■□□□ 1.61
ABCF3-203ENST00000429586 ITSN2Q9NZM3 1697 aa25.1■■□□□ 1.61
ABCF3-203ENST00000429586 KDM5BQ9UGL1 1544 aa25.09■■□□□ 1.61
ABCF3-203ENST00000429586 ABCC10Q5T3U5 1492 aa25.09■■□□□ 1.61
ABCF3-203ENST00000429586 ZNF777Q9ULD5 760 aaPredicted RBP25.07■■□□□ 1.6
ABCF3-203ENST00000429586 KCNH8Q96L42 1107 aa25.07■■□□□ 1.6
ABCF3-203ENST00000429586 CFDP1Q9UEE9 299 aaPredicted RBP25.07■■□□□ 1.6
ABCF3-203ENST00000429586 RAB3GAP2Q9H2M9 1393 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms