RNA–Protein interactions for RNA: ENST00000427623.5

FREM1-205, Transcript of FRAS1 related extracellular matrix 1, humanhuman

TSL 5

Gene FREM1, Length 1,421 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-205ENST00000427623 PBRM1Q86U86 1689 aa13.26□□□□□ -0.29
FREM1-205ENST00000427623 UBTFP17480 764 aaKnown RBP13.26□□□□□ -0.29
FREM1-205ENST00000427623 ACIN1Q9UKV3 1341 aaKnown RBP13.26□□□□□ -0.29
FREM1-205ENST00000427623 EIF4G3O43432 1585 aaKnown RBP13.25□□□□□ -0.29
FREM1-205ENST00000427623 DIEXFQ68CQ4 756 aaKnown RBP13.24□□□□□ -0.29
FREM1-205ENST00000427623 RAD54L2Q9Y4B4 1467 aa13.24□□□□□ -0.29
FREM1-205ENST00000427623 KIF21BO75037 1637 aa13.23□□□□□ -0.29
FREM1-205ENST00000427623 ABCA5Q8WWZ7 1642 aa13.22□□□□□ -0.29
FREM1-205ENST00000427623 ABCA10Q8WWZ4 1543 aa13.21□□□□□ -0.29
FREM1-205ENST00000427623 ZNF608Q9ULD9 1512 aaPredicted RBP13.2□□□□□ -0.3
FREM1-205ENST00000427623 NCBP3Q53F19 620 aaKnown RBP13.19□□□□□ -0.3
FREM1-205ENST00000427623 DNAJC5Q9H3Z4 198 aa13.19□□□□□ -0.3
FREM1-205ENST00000427623 ZNF316A6NFI3 1004 aaPredicted RBP13.17□□□□□ -0.3
FREM1-205ENST00000427623 RNF216Q9NWF9 866 aaPredicted RBP13.16□□□□□ -0.3
FREM1-205ENST00000427623 RUSC2Q8N2Y8 1516 aa13.14□□□□□ -0.31
FREM1-205ENST00000427623 APLP2Q06481 763 aa13.13□□□□□ -0.31
FREM1-205ENST00000427623 CLIP1P30622 1438 aa13.13□□□□□ -0.31
FREM1-205ENST00000427623 VPS8Q8N3P4 1428 aa13.12□□□□□ -0.31
FREM1-205ENST00000427623 CHD1O14646 1710 aa13.12□□□□□ -0.31
FREM1-205ENST00000427623 AQRO60306 1485 aaKnown RBP eCLIP13.12□□□□□ -0.315e-8■■■□□ 17.4
FREM1-205ENST00000427623 GAPVD1Q14C86 1478 aa13.12□□□□□ -0.31
FREM1-205ENST00000427623 TDRD9Q8NDG6 1382 aaKnown RBP13.11□□□□□ -0.31
FREM1-205ENST00000427623 NEUROD1Q13562 356 aa13.09□□□□□ -0.31
FREM1-205ENST00000427623 GRIN2BQ13224 1484 aa13.09□□□□□ -0.31
FREM1-205ENST00000427623 ERICH3Q5RHP9 1530 aa13.08□□□□□ -0.31
FREM1-205ENST00000427623 CUL7Q14999 1698 aa13.08□□□□□ -0.32
FREM1-205ENST00000427623 KIF27Q86VH2 1401 aa13.07□□□□□ -0.32
FREM1-205ENST00000427623 MYT1Q01538 1121 aa13.07□□□□□ -0.32
FREM1-205ENST00000427623 CLSPNQ9HAW4 1339 aa13.07□□□□□ -0.32
FREM1-205ENST00000427623 ADAMTS12P58397 1594 aa13.07□□□□□ -0.32
FREM1-205ENST00000427623 SNAPC4Q5SXM2 1469 aa13.06□□□□□ -0.32
FREM1-205ENST00000427623 KCNA4P22459 653 aa13.05□□□□□ -0.32
FREM1-205ENST00000427623 TTBK1Q5TCY1 1321 aaPredicted RBP13.05□□□□□ -0.32
FREM1-205ENST00000427623 MAGI1Q96QZ7 1491 aaPredicted RBP13.05□□□□□ -0.32
FREM1-205ENST00000427623 POTEHQ6S545 545 aa13.03□□□□□ -0.32
FREM1-205ENST00000427623 NPM3O75607 178 aaKnown RBP13.02□□□□□ -0.33
FREM1-205ENST00000427623 GTF3C3Q9Y5Q9 886 aa13.02□□□□□ -0.33
FREM1-205ENST00000427623 SYNJ2O15056 1496 aa12.98□□□□□ -0.33
FREM1-205ENST00000427623 RAPGEF2Q9Y4G8 1499 aa12.98□□□□□ -0.33
FREM1-205ENST00000427623 HNRNPUL2Q1KMD3 747 aaKnown RBP12.96□□□□□ -0.33
FREM1-205ENST00000427623 FHAD1B1AJZ9 1412 aa12.96□□□□□ -0.33
FREM1-205ENST00000427623 CTTNBP2Q8WZ74 1663 aa12.95□□□□□ -0.34
FREM1-205ENST00000427623 IGF1RP08069 1367 aa12.93□□□□□ -0.34
FREM1-205ENST00000427623 GRIN2AQ12879 1464 aa12.93□□□□□ -0.34
FREM1-205ENST00000427623 PRXQ9BXM0 1461 aa12.93□□□□□ -0.34
FREM1-205ENST00000427623 CEP170Q5SW79 1584 aa12.9□□□□□ -0.34
FREM1-205ENST00000427623 FBLN2P98095 1184 aa12.89□□□□□ -0.35
FREM1-205ENST00000427623 CARMIL1Q5VZK9 1371 aa12.89□□□□□ -0.35
FREM1-205ENST00000427623 CHMP7Q8WUX9 453 aaPredicted RBP12.88□□□□□ -0.35
FREM1-205ENST00000427623 CLASP1Q7Z460 1538 aa12.87□□□□□ -0.35
FREM1-205ENST00000427623 MIER1Q8N108 512 aa12.86□□□□□ -0.35
FREM1-205ENST00000427623 RRBP1Q9P2E9 1410 aaKnown RBP12.85□□□□□ -0.35
FREM1-205ENST00000427623 ARAP1Q96P48 1450 aa12.85□□□□□ -0.35
FREM1-205ENST00000427623 NUP160Q12769 1436 aa12.84□□□□□ -0.35
FREM1-205ENST00000427623 DHX57Q6P158 1386 aaKnown RBP12.83□□□□□ -0.36
FREM1-205ENST00000427623 IQGAP2Q13576 1575 aa12.81□□□□□ -0.36
FREM1-205ENST00000427623 OSCARQ8IYS5 282 aa12.81□□□□□ -0.36
FREM1-205ENST00000427623 SHROOM2Q13796 1616 aa12.81□□□□□ -0.36
FREM1-205ENST00000427623 MAP3K1Q13233 1512 aa12.8□□□□□ -0.36
FREM1-205ENST00000427623 YTHDC1Q96MU7 727 aaKnown RBP12.79□□□□□ -0.36
FREM1-205ENST00000427623 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.79□□□□□ -0.364e-10■■■■□ 23
FREM1-205ENST00000427623 KIAA0586Q9BVV6 1533 aa12.77□□□□□ -0.37
FREM1-205ENST00000427623 CCNB3Q8WWL7 1395 aa12.77□□□□□ -0.37
FREM1-205ENST00000427623 RANGAP1P46060 587 aaPredicted RBP12.75□□□□□ -0.37
FREM1-205ENST00000427623 RIMBP3CA6NJZ7 1639 aa12.74□□□□□ -0.37
FREM1-205ENST00000427623 RIMBP3BA6NNM3 1639 aa12.74□□□□□ -0.37
FREM1-205ENST00000427623 RIMBP3Q9UFD9 1639 aa12.74□□□□□ -0.37
FREM1-205ENST00000427623 ARHGAP35Q9NRY4 1499 aa12.72□□□□□ -0.37
FREM1-205ENST00000427623 KANK4Q5T7N3 995 aaPredicted RBP12.71□□□□□ -0.37
FREM1-205ENST00000427623 ARHGEF11O15085 1522 aa12.71□□□□□ -0.37
FREM1-205ENST00000427623 UGGT2Q9NYU1 1516 aa12.7□□□□□ -0.38
FREM1-205ENST00000427623 KIAA0556O60303 1618 aa12.69□□□□□ -0.38
FREM1-205ENST00000427623 ERCC6L2Q5T890 1561 aa12.69□□□□□ -0.38
FREM1-205ENST00000427623 TIMELESSQ9UNS1 1208 aa12.69□□□□□ -0.38
FREM1-205ENST00000427623 SAMD9Q5K651 1589 aa12.68□□□□□ -0.38
FREM1-205ENST00000427623 TIAM1Q13009 1591 aa12.66□□□□□ -0.38
FREM1-205ENST00000427623 PRG4Q92954 1404 aaPredicted RBP12.66□□□□□ -0.38
FREM1-205ENST00000427623 JPH4Q96JJ6 628 aa12.64□□□□□ -0.39
FREM1-205ENST00000427623 EFCAB5A4FU69 1503 aa12.64□□□□□ -0.39
FREM1-205ENST00000427623 DISP1Q96F81 1524 aa12.63□□□□□ -0.39
FREM1-205ENST00000427623 SETD5Q9C0A6 1442 aa12.63□□□□□ -0.39
FREM1-205ENST00000427623 CARMIL2Q6F5E8 1435 aa12.62□□□□□ -0.39
FREM1-205ENST00000427623 LRRC9Q6ZRR7 1453 aa12.61□□□□□ -0.39
FREM1-205ENST00000427623 RAB3GAP2Q9H2M9 1393 aa12.61□□□□□ -0.39
FREM1-205ENST00000427623 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.61□□□□□ -0.39
FREM1-205ENST00000427623 CFAP43Q8NDM7 1665 aa12.57□□□□□ -0.4
FREM1-205ENST00000427623 MAPKBP1O60336 1514 aa12.54□□□□□ -0.4
FREM1-205ENST00000427623 SUPT16HQ9Y5B9 1047 aaKnown RBP12.54□□□□□ -0.4
FREM1-205ENST00000427623 FYCO1Q9BQS8 1478 aa12.54□□□□□ -0.4
FREM1-205ENST00000427623 FHOD3Q2V2M9 1422 aa12.54□□□□□ -0.4
FREM1-205ENST00000427623 RAPGEF6Q8TEU7 1601 aa12.53□□□□□ -0.4
FREM1-205ENST00000427623 ADCY10Q96PN6 1610 aa12.53□□□□□ -0.4
FREM1-205ENST00000427623 ITGAEP38570 1179 aa12.53□□□□□ -0.4
FREM1-205ENST00000427623 PTPRGP23470 1445 aa12.51□□□□□ -0.41
FREM1-205ENST00000427623 CASKIN1Q8WXD9 1431 aa12.51□□□□□ -0.41
FREM1-205ENST00000427623 LRRIQ1Q96JM4 1722 aa12.51□□□□□ -0.41
FREM1-205ENST00000427623 ABCA8O94911 1581 aa12.51□□□□□ -0.41
FREM1-205ENST00000427623 DSG3P32926 999 aa12.51□□□□□ -0.41
FREM1-205ENST00000427623 P3H3Q8IVL6 736 aa12.51□□□□□ -0.41
FREM1-205ENST00000427623 PHLDB1Q86UU1 1377 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms