RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 JPH4Q96JJ6 628 aa25.75■■□□□ 1.71
HDAC6-206ENST00000426196 MAPKBP1O60336 1514 aa25.74■■□□□ 1.71
HDAC6-206ENST00000426196 NPM1P06748 294 aaKnown RBP eCLIP25.74■■□□□ 1.71
HDAC6-206ENST00000426196 DIP2BQ9P265 1576 aa25.72■■□□□ 1.71
HDAC6-206ENST00000426196 RUSC2Q8N2Y8 1516 aa25.69■■□□□ 1.7
HDAC6-206ENST00000426196 KDM6BO15054 1643 aa25.69■■□□□ 1.7
HDAC6-206ENST00000426196 ADCY10Q96PN6 1610 aa25.65■■□□□ 1.7
HDAC6-206ENST00000426196 TSPOAP1O95153 1857 aa25.62■■□□□ 1.69
HDAC6-206ENST00000426196 KDM4FA0A1W2PPD8 638 aa25.61■■□□□ 1.69
HDAC6-206ENST00000426196 SUPT5HO00267 1087 aaKnown RBP25.54■■□□□ 1.68
HDAC6-206ENST00000426196 ILDR1Q86SU0 546 aaPredicted RBP25.49■■□□□ 1.67
HDAC6-206ENST00000426196 KIAA0586Q9BVV6 1533 aa25.47■■□□□ 1.67
HDAC6-206ENST00000426196 CUL7Q14999 1698 aa25.38■■□□□ 1.65
HDAC6-206ENST00000426196 PTPRGP23470 1445 aa25.36■■□□□ 1.65
HDAC6-206ENST00000426196 ADGRL1O94910 1474 aa25.32■■□□□ 1.64
HDAC6-206ENST00000426196 PPRC1Q5VV67 1664 aaKnown RBP25.32■■□□□ 1.64
HDAC6-206ENST00000426196 ABCC2Q92887 1545 aa25.32■■□□□ 1.64
HDAC6-206ENST00000426196 PLB1Q6P1J6 1458 aa25.3■■□□□ 1.64
HDAC6-206ENST00000426196 GLI2P10070 1586 aa25.3■■□□□ 1.64
HDAC6-206ENST00000426196 IGF1RP08069 1367 aa25.3■■□□□ 1.64
HDAC6-206ENST00000426196 TTBK1Q5TCY1 1321 aaPredicted RBP25.29■■□□□ 1.64
HDAC6-206ENST00000426196 ASXL2Q76L83 1435 aa25.29■■□□□ 1.64
HDAC6-206ENST00000426196 KIF27Q86VH2 1401 aa25.28■■□□□ 1.64
HDAC6-206ENST00000426196 CARMIL2Q6F5E8 1435 aa25.27■■□□□ 1.64
HDAC6-206ENST00000426196 TNIKQ9UKE5 1360 aa25.26■■□□□ 1.63
HDAC6-206ENST00000426196 UHRF1BP1LA0JNW5 1464 aa25.19■■□□□ 1.62
HDAC6-206ENST00000426196 HECW2Q9P2P5 1572 aa25.18■■□□□ 1.62
HDAC6-206ENST00000426196 IQGAP2Q13576 1575 aa25.17■■□□□ 1.62
HDAC6-206ENST00000426196 CARMIL1Q5VZK9 1371 aa25.15■■□□□ 1.62
HDAC6-206ENST00000426196 MAP3K4Q9Y6R4 1608 aa25.15■■□□□ 1.62
HDAC6-206ENST00000426196 TEX14Q8IWB6 1497 aa25.15■■□□□ 1.62
HDAC6-206ENST00000426196 UACAQ9BZF9 1416 aa25.13■■□□□ 1.61
HDAC6-206ENST00000426196 COL17A1Q9UMD9 1497 aaPredicted RBP25.13■■□□□ 1.61
HDAC6-206ENST00000426196 EPRSP07814 1512 aaKnown RBP25.12■■□□□ 1.61
HDAC6-206ENST00000426196 KDM5BQ9UGL1 1544 aa25.07■■□□□ 1.6
HDAC6-206ENST00000426196 ZCCHC11Q5TAX3 1644 aaKnown RBP25.05■■□□□ 1.6
HDAC6-206ENST00000426196 DISP1Q96F81 1524 aa25.04■■□□□ 1.6
HDAC6-206ENST00000426196 UGGT2Q9NYU1 1516 aa24.96■■□□□ 1.59
HDAC6-206ENST00000426196 WDR7Q9Y4E6 1490 aa24.95■■□□□ 1.58
HDAC6-206ENST00000426196 KIAA0556O60303 1618 aa24.94■■□□□ 1.58
HDAC6-206ENST00000426196 CFAP43Q8NDM7 1665 aa24.89■■□□□ 1.58
HDAC6-206ENST00000426196 MAGI3Q5TCQ9 1506 aa24.86■■□□□ 1.57
HDAC6-206ENST00000426196 RAPGEF2Q9Y4G8 1499 aa24.86■■□□□ 1.57
HDAC6-206ENST00000426196 CD109Q6YHK3 1445 aa24.86■■□□□ 1.57
HDAC6-206ENST00000426196 KIF21BO75037 1637 aa24.83■■□□□ 1.56
HDAC6-206ENST00000426196 FBXO41Q8TF61 875 aa24.82■■□□□ 1.56
HDAC6-206ENST00000426196 KCNH8Q96L42 1107 aa24.77■■□□□ 1.56
HDAC6-206ENST00000426196 CTTNBP2Q8WZ74 1663 aa24.76■■□□□ 1.55
HDAC6-206ENST00000426196 ABCA8O94911 1581 aa24.73■■□□□ 1.55
HDAC6-206ENST00000426196 GOLGA3Q08378 1498 aa24.73■■□□□ 1.55
HDAC6-206ENST00000426196 ARAP3Q8WWN8 1544 aa24.69■■□□□ 1.54
HDAC6-206ENST00000426196 ADAMTSL3P82987 1691 aa24.65■■□□□ 1.54
HDAC6-206ENST00000426196 PTPRMP28827 1452 aa24.64■■□□□ 1.54
HDAC6-206ENST00000426196 PHLDB1Q86UU1 1377 aa24.58■■□□□ 1.53
HDAC6-206ENST00000426196 FAM9AQ8IZU1 332 aaPredicted RBP24.56■■□□□ 1.52
HDAC6-206ENST00000426196 PCF11O94913 1555 aaKnown RBP24.55■■□□□ 1.52
HDAC6-206ENST00000426196 ABCA9Q8IUA7 1624 aa24.55■■□□□ 1.52
HDAC6-206ENST00000426196 BCORL1Q5H9F3 1711 aa24.55■■□□□ 1.52
HDAC6-206ENST00000426196 MADDQ8WXG6 1647 aa24.51■■□□□ 1.51
HDAC6-206ENST00000426196 ARID3CA6NKF2 412 aa24.51■■□□□ 1.51
HDAC6-206ENST00000426196 ATP10BO94823 1461 aa24.5■■□□□ 1.51
HDAC6-206ENST00000426196 RAPGEF3O95398 923 aa24.49■■□□□ 1.51
HDAC6-206ENST00000426196 ARID4BQ4LE39 1312 aaPredicted RBP24.49■■□□□ 1.51
HDAC6-206ENST00000426196 NEO1Q92859 1461 aa24.49■■□□□ 1.51
HDAC6-206ENST00000426196 LMTK3Q96Q04 1460 aa24.48■■□□□ 1.51
HDAC6-206ENST00000426196 FRMPD1Q5SYB0 1578 aa24.44■■□□□ 1.5
HDAC6-206ENST00000426196 RIMS1Q86UR5 1692 aaKnown RBP24.43■■□□□ 1.5
HDAC6-206ENST00000426196 PRXQ9BXM0 1461 aa24.42■■□□□ 1.5
HDAC6-206ENST00000426196 ARHGEF40Q8TER5 1519 aa24.4■■□□□ 1.5
HDAC6-206ENST00000426196 P3H3Q8IVL6 736 aa24.39■■□□□ 1.49
HDAC6-206ENST00000426196 RAPGEF6Q8TEU7 1601 aa24.38■■□□□ 1.49
HDAC6-206ENST00000426196 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.34■■□□□ 1.49
HDAC6-206ENST00000426196 HNRNPUL2Q1KMD3 747 aaKnown RBP24.34■■□□□ 1.49
HDAC6-206ENST00000426196 RICTORQ6R327 1708 aa24.32■■□□□ 1.48
HDAC6-206ENST00000426196 SAMD9Q5K651 1589 aa24.32■■□□□ 1.48
HDAC6-206ENST00000426196 HSPA2P54652 639 aa24.31■■□□□ 1.48
HDAC6-206ENST00000426196 DENND4BO75064 1496 aaPredicted RBP24.31■■□□□ 1.48
HDAC6-206ENST00000426196 POGZQ7Z3K3 1410 aa24.3■■□□□ 1.48
HDAC6-206ENST00000426196 CFAP74Q9C0B2 1584 aa24.29■■□□□ 1.48
HDAC6-206ENST00000426196 FANCAO15360 1455 aa24.29■■□□□ 1.48
HDAC6-206ENST00000426196 PLPPR3Q6T4P5 718 aa24.26■■□□□ 1.47
HDAC6-206ENST00000426196 CERKQ8TCT0 537 aa24.26■■□□□ 1.47
HDAC6-206ENST00000426196 AKNAQ7Z591 1439 aa24.26■■□□□ 1.47
HDAC6-206ENST00000426196 FHOD3Q2V2M9 1422 aa24.25■■□□□ 1.47
HDAC6-206ENST00000426196 NUP153P49790 1475 aaKnown RBP24.24■■□□□ 1.47
HDAC6-206ENST00000426196 ZMYM4Q5VZL5 1548 aa24.23■■□□□ 1.47
HDAC6-206ENST00000426196 FER1L4A9Z1Z3 1794 aa24.22■■□□□ 1.47
HDAC6-206ENST00000426196 EFCAB5A4FU69 1503 aa24.22■■□□□ 1.47
HDAC6-206ENST00000426196 ZFYVE16Q7Z3T8 1539 aa24.21■■□□□ 1.47
HDAC6-206ENST00000426196 PLEKHD1A6NEE1 506 aa24.18■■□□□ 1.46
HDAC6-206ENST00000426196 SIGLEC1Q9BZZ2 1709 aa24.18■■□□□ 1.46
HDAC6-206ENST00000426196 TTC37Q6PGP7 1564 aa24.16■■□□□ 1.46
HDAC6-206ENST00000426196 MAGI2Q86UL8 1455 aa24.16■■□□□ 1.46
HDAC6-206ENST00000426196 YEATS2Q9ULM3 1422 aa24.15■■□□□ 1.46
HDAC6-206ENST00000426196 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.15■■□□□ 1.46
HDAC6-206ENST00000426196 PREX1Q8TCU6 1659 aa24.12■■□□□ 1.45
HDAC6-206ENST00000426196 MLECQ14165 292 aa24.12■■□□□ 1.45
HDAC6-206ENST00000426196 DISP3Q9P2K9 1392 aa24.12■■□□□ 1.45
HDAC6-206ENST00000426196 HECW1Q76N89 1606 aa24.11■■□□□ 1.45
HDAC6-206ENST00000426196 RANGAP1P46060 587 aaPredicted RBP24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms