RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 CHMP7Q8WUX9 453 aaPredicted RBP23.66■■□□□ 1.38
CALD1-206ENST00000424922 FBLN2P98095 1184 aa23.65■■□□□ 1.38
CALD1-206ENST00000424922 ARHGAP35Q9NRY4 1499 aa23.61■■□□□ 1.37
CALD1-206ENST00000424922 CHD1O14646 1710 aa23.58■■□□□ 1.37
CALD1-206ENST00000424922 ARAP1Q96P48 1450 aa23.57■■□□□ 1.36
CALD1-206ENST00000424922 IQGAP2Q13576 1575 aa23.57■■□□□ 1.36
CALD1-206ENST00000424922 CEP170Q5SW79 1584 aa23.55■■□□□ 1.36
CALD1-206ENST00000424922 PCGF6Q9BYE7 350 aa23.53■■□□□ 1.36
CALD1-206ENST00000424922 VPS8Q8N3P4 1428 aa23.52■■□□□ 1.36
CALD1-206ENST00000424922 KIAA0586Q9BVV6 1533 aa23.52■■□□□ 1.36
CALD1-206ENST00000424922 EFCAB5A4FU69 1503 aa23.51■■□□□ 1.35
CALD1-206ENST00000424922 P3H3Q8IVL6 736 aa23.5■■□□□ 1.35
CALD1-206ENST00000424922 NUP160Q12769 1436 aa23.49■■□□□ 1.35
CALD1-206ENST00000424922 SAMD9Q5K651 1589 aa23.48■■□□□ 1.35
CALD1-206ENST00000424922 HRCP23327 699 aa23.46■■□□□ 1.35
CALD1-206ENST00000424922 FHOD3Q2V2M9 1422 aa23.44■■□□□ 1.34
CALD1-206ENST00000424922 UGGT2Q9NYU1 1516 aa23.42■■□□□ 1.34
CALD1-206ENST00000424922 TRIM26Q12899 539 aaPredicted RBP23.41■■□□□ 1.34
CALD1-206ENST00000424922 PPARGC1BQ86YN6 1023 aaKnown RBP23.39■■□□□ 1.33
CALD1-206ENST00000424922 JPH4Q96JJ6 628 aa23.33■■□□□ 1.32
CALD1-206ENST00000424922 KIAA0556O60303 1618 aa23.33■■□□□ 1.32
CALD1-206ENST00000424922 DISP1Q96F81 1524 aa23.33■■□□□ 1.32
CALD1-206ENST00000424922 APLP2Q06481 763 aa23.3■■□□□ 1.32
CALD1-206ENST00000424922 PCF11O94913 1555 aaKnown RBP23.3■■□□□ 1.32
CALD1-206ENST00000424922 FMN1Q68DA7 1419 aa23.3■■□□□ 1.32
CALD1-206ENST00000424922 TTBK1Q5TCY1 1321 aaPredicted RBP23.25■■□□□ 1.31
CALD1-206ENST00000424922 CARMIL2Q6F5E8 1435 aa23.23■■□□□ 1.31
CALD1-206ENST00000424922 SHROOM2Q13796 1616 aa23.23■■□□□ 1.31
CALD1-206ENST00000424922 CLASP1Q7Z460 1538 aa23.23■■□□□ 1.31
CALD1-206ENST00000424922 CASKIN1Q8WXD9 1431 aa23.23■■□□□ 1.31
CALD1-206ENST00000424922 ATP1B4Q9UN42 357 aaPredicted RBP23.23■■□□□ 1.31
CALD1-206ENST00000424922 FYCO1Q9BQS8 1478 aa23.22■■□□□ 1.31
CALD1-206ENST00000424922 PRG4Q92954 1404 aaPredicted RBP23.2■■□□□ 1.3
CALD1-206ENST00000424922 LRRIQ1Q96JM4 1722 aa23.17■■□□□ 1.3
CALD1-206ENST00000424922 TIAM1Q13009 1591 aa23.16■■□□□ 1.3
CALD1-206ENST00000424922 CFAP43Q8NDM7 1665 aa23.15■■□□□ 1.3
CALD1-206ENST00000424922 MAP3K1Q13233 1512 aa23.13■■□□□ 1.29
CALD1-206ENST00000424922 KANK4Q5T7N3 995 aaPredicted RBP23.13■■□□□ 1.29
CALD1-206ENST00000424922 OSCARQ8IYS5 282 aa23.11■■□□□ 1.29
CALD1-206ENST00000424922 HECW1Q76N89 1606 aa23.11■■□□□ 1.29
CALD1-206ENST00000424922 ERCC6L2Q5T890 1561 aa23.1■■□□□ 1.29
CALD1-206ENST00000424922 RAPGEF6Q8TEU7 1601 aa23.09■■□□□ 1.29
CALD1-206ENST00000424922 PLB1Q6P1J6 1458 aa23.04■■□□□ 1.28
CALD1-206ENST00000424922 LRRC9Q6ZRR7 1453 aa23.04■■□□□ 1.28
CALD1-206ENST00000424922 PTPRGP23470 1445 aa23.03■■□□□ 1.28
CALD1-206ENST00000424922 CCDC18Q5T9S5 1454 aa23.02■■□□□ 1.28
CALD1-206ENST00000424922 EPRSP07814 1512 aaKnown RBP23.02■■□□□ 1.27
CALD1-206ENST00000424922 NUP153P49790 1475 aaKnown RBP23■■□□□ 1.27
CALD1-206ENST00000424922 ARID3CA6NKF2 412 aa23■■□□□ 1.27
CALD1-206ENST00000424922 CDK13Q14004 1512 aaKnown RBP22.99■■□□□ 1.27
CALD1-206ENST00000424922 ABCA8O94911 1581 aa22.99■■□□□ 1.27
CALD1-206ENST00000424922 MTUS2Q5JR59 1369 aa22.93■■□□□ 1.26
CALD1-206ENST00000424922 MAGI3Q5TCQ9 1506 aa22.91■■□□□ 1.26
CALD1-206ENST00000424922 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.9■■□□□ 1.26
CALD1-206ENST00000424922 HNRNPUL2Q1KMD3 747 aaKnown RBP22.9■■□□□ 1.26
CALD1-206ENST00000424922 UACAQ9BZF9 1416 aa22.89■■□□□ 1.26
CALD1-206ENST00000424922 EHBP1L1Q8N3D4 1523 aa22.88■■□□□ 1.25
CALD1-206ENST00000424922 PELP1Q8IZL8 1130 aaKnown RBP22.87■■□□□ 1.25
CALD1-206ENST00000424922 SUPT6HQ7KZ85 1726 aaKnown RBP22.86■■□□□ 1.25
CALD1-206ENST00000424922 ZEB1P37275 1124 aaPredicted RBP22.85■■□□□ 1.25
CALD1-206ENST00000424922 ATP10BO94823 1461 aa22.83■■□□□ 1.25
CALD1-206ENST00000424922 ABCC2Q92887 1545 aa22.83■■□□□ 1.25
CALD1-206ENST00000424922 PHLDB1Q86UU1 1377 aa22.82■■□□□ 1.24
CALD1-206ENST00000424922 CDK11AQ9UQ88 783 aaPredicted RBP22.81■■□□□ 1.24
CALD1-206ENST00000424922 NCOA2Q15596 1464 aa22.79■■□□□ 1.24
CALD1-206ENST00000424922 RRBP1Q9P2E9 1410 aaKnown RBP22.78■■□□□ 1.24
CALD1-206ENST00000424922 UHRF1BP1LA0JNW5 1464 aa22.76■■□□□ 1.23
CALD1-206ENST00000424922 ARHGEF11O15085 1522 aa22.74■■□□□ 1.23
CALD1-206ENST00000424922 TROQ12816 1431 aaPredicted RBP22.74■■□□□ 1.23
CALD1-206ENST00000424922 ADCY10Q96PN6 1610 aa22.74■■□□□ 1.23
CALD1-206ENST00000424922 CCNB3Q8WWL7 1395 aa22.73■■□□□ 1.23
CALD1-206ENST00000424922 PLEKHD1A6NEE1 506 aa22.73■■□□□ 1.23
CALD1-206ENST00000424922 ZCCHC11Q5TAX3 1644 aaKnown RBP22.72■■□□□ 1.23
CALD1-206ENST00000424922 KIF14Q15058 1648 aa22.7■■□□□ 1.22
CALD1-206ENST00000424922 KDM5BQ9UGL1 1544 aa22.68■■□□□ 1.22
CALD1-206ENST00000424922 MYOM3Q5VTT5 1437 aa22.68■■□□□ 1.22
CALD1-206ENST00000424922 FGD6Q6ZV73 1430 aa22.67■■□□□ 1.22
CALD1-206ENST00000424922 RIMBP3CA6NJZ7 1639 aa22.66■■□□□ 1.22
CALD1-206ENST00000424922 RIMBP3BA6NNM3 1639 aa22.66■■□□□ 1.22
CALD1-206ENST00000424922 RIMBP3Q9UFD9 1639 aa22.66■■□□□ 1.22
CALD1-206ENST00000424922 FAM50AQ14320 339 aaKnown RBP22.64■■□□□ 1.21
CALD1-206ENST00000424922 PTPN23Q9H3S7 1636 aa22.6■■□□□ 1.21
CALD1-206ENST00000424922 ITSN2Q9NZM3 1697 aa22.58■■□□□ 1.21
CALD1-206ENST00000424922 ITGAEP38570 1179 aa22.58■■□□□ 1.21
CALD1-206ENST00000424922 CDC42BPAQ5VT25 1732 aa22.57■■□□□ 1.2
CALD1-206ENST00000424922 ABCC10Q5T3U5 1492 aa22.56■■□□□ 1.2
CALD1-206ENST00000424922 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.56■■□□□ 1.2
CALD1-206ENST00000424922 MIA2Q96PC5 1412 aa22.55■■□□□ 1.2
CALD1-206ENST00000424922 GPATCH8Q9UKJ3 1502 aaKnown RBP22.54■■□□□ 1.2
CALD1-206ENST00000424922 MYT1Q01538 1121 aa22.54■■□□□ 1.2
CALD1-206ENST00000424922 CYB5RLQ6IPT4 315 aa22.54■■□□□ 1.2
CALD1-206ENST00000424922 KCNH8Q96L42 1107 aa22.54■■□□□ 1.2
CALD1-206ENST00000424922 NPM1P06748 294 aaKnown RBP eCLIP22.52■■□□□ 1.2
CALD1-206ENST00000424922 TCOF1Q13428 1488 aaKnown RBP22.51■■□□□ 1.19
CALD1-206ENST00000424922 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.5■■□□□ 1.19
CALD1-206ENST00000424922 TTC37Q6PGP7 1564 aa22.5■■□□□ 1.19
CALD1-206ENST00000424922 WDR7Q9Y4E6 1490 aa22.49■■□□□ 1.19
CALD1-206ENST00000424922 CFDP1Q9UEE9 299 aaPredicted RBP22.49■■□□□ 1.19
CALD1-206ENST00000424922 CDC42BPBQ9Y5S2 1711 aa22.48■■□□□ 1.19
CALD1-206ENST00000424922 ASXL2Q76L83 1435 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms