RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 CARMIL1Q5VZK9 1371 aa21.47■■□□□ 1.03
MSH5-206ENST00000423982 PRXQ9BXM0 1461 aa21.46■■□□□ 1.03
MSH5-206ENST00000423982 HNRNPUL2Q1KMD3 747 aaKnown RBP21.44■■□□□ 1.02
MSH5-206ENST00000423982 KIF21BO75037 1637 aa21.44■■□□□ 1.02
MSH5-206ENST00000423982 MIER1Q8N108 512 aa21.43■■□□□ 1.02
MSH5-206ENST00000423982 ABCA5Q8WWZ7 1642 aa21.43■■□□□ 1.02
MSH5-206ENST00000423982 EIF4G3O43432 1585 aaKnown RBP21.36■■□□□ 1.01
MSH5-206ENST00000423982 FBLN2P98095 1184 aa21.35■■□□□ 1.01
MSH5-206ENST00000423982 ERICH3Q5RHP9 1530 aa21.32■■□□□ 1
MSH5-206ENST00000423982 GRIN2BQ13224 1484 aa21.31■■□□□ 1
MSH5-206ENST00000423982 PBRM1Q86U86 1689 aa21.31■■□□□ 1
MSH5-206ENST00000423982 SNAPC4Q5SXM2 1469 aa21.29■■□□□ 1
MSH5-206ENST00000423982 CUL7Q14999 1698 aa21.26■□□□□ 0.99
MSH5-206ENST00000423982 CLIP1P30622 1438 aa21.24■□□□□ 0.99
MSH5-206ENST00000423982 P3H3Q8IVL6 736 aa21.22■□□□□ 0.99
MSH5-206ENST00000423982 CHMP7Q8WUX9 453 aaPredicted RBP21.22■□□□□ 0.99
MSH5-206ENST00000423982 FHAD1B1AJZ9 1412 aa21.21■□□□□ 0.99
MSH5-206ENST00000423982 ADAMTS12P58397 1594 aa21.19■□□□□ 0.98
MSH5-206ENST00000423982 MAGI1Q96QZ7 1491 aaPredicted RBP21.1■□□□□ 0.97
MSH5-206ENST00000423982 MYT1Q01538 1121 aa21.1■□□□□ 0.97
MSH5-206ENST00000423982 GRIN2AQ12879 1464 aa21.08■□□□□ 0.97
MSH5-206ENST00000423982 VPS8Q8N3P4 1428 aa21.08■□□□□ 0.96
MSH5-206ENST00000423982 SYNJ2O15056 1496 aa21.07■□□□□ 0.96
MSH5-206ENST00000423982 APLP2Q06481 763 aa21.06■□□□□ 0.96
MSH5-206ENST00000423982 ARHGAP35Q9NRY4 1499 aa21.05■□□□□ 0.96
MSH5-206ENST00000423982 ARAP1Q96P48 1450 aa21.04■□□□□ 0.96
MSH5-206ENST00000423982 CTTNBP2Q8WZ74 1663 aa21.03■□□□□ 0.96
MSH5-206ENST00000423982 ATP1B4Q9UN42 357 aaPredicted RBP21.01■□□□□ 0.95
MSH5-206ENST00000423982 FHOD3Q2V2M9 1422 aa21■□□□□ 0.95
MSH5-206ENST00000423982 CEP170Q5SW79 1584 aa20.97■□□□□ 0.95
MSH5-206ENST00000423982 IQGAP2Q13576 1575 aa20.95■□□□□ 0.94
MSH5-206ENST00000423982 CHD1O14646 1710 aa20.93■□□□□ 0.94
MSH5-206ENST00000423982 DHX57Q6P158 1386 aaKnown RBP20.92■□□□□ 0.94
MSH5-206ENST00000423982 KIAA0586Q9BVV6 1533 aa20.9■□□□□ 0.94
MSH5-206ENST00000423982 ARID3CA6NKF2 412 aa20.88■□□□□ 0.93
MSH5-206ENST00000423982 KANK4Q5T7N3 995 aaPredicted RBP20.88■□□□□ 0.93
MSH5-206ENST00000423982 SUPT16HQ9Y5B9 1047 aaKnown RBP20.88■□□□□ 0.93
MSH5-206ENST00000423982 JPH4Q96JJ6 628 aa20.87■□□□□ 0.93
MSH5-206ENST00000423982 NUP160Q12769 1436 aa20.87■□□□□ 0.93
MSH5-206ENST00000423982 EFCAB5A4FU69 1503 aa20.82■□□□□ 0.92
MSH5-206ENST00000423982 SAMD9Q5K651 1589 aa20.79■□□□□ 0.92
MSH5-206ENST00000423982 DISP1Q96F81 1524 aa20.78■□□□□ 0.92
MSH5-206ENST00000423982 KCNH8Q96L42 1107 aa20.77■□□□□ 0.91
MSH5-206ENST00000423982 UGGT2Q9NYU1 1516 aa20.76■□□□□ 0.91
MSH5-206ENST00000423982 PCF11O94913 1555 aaKnown RBP20.76■□□□□ 0.91
MSH5-206ENST00000423982 ITGAEP38570 1179 aa20.76■□□□□ 0.91
MSH5-206ENST00000423982 CLSPNQ9HAW4 1339 aa20.75■□□□□ 0.91
MSH5-206ENST00000423982 PRG4Q92954 1404 aaPredicted RBP20.74■□□□□ 0.91
MSH5-206ENST00000423982 KIAA0556O60303 1618 aa20.72■□□□□ 0.91
MSH5-206ENST00000423982 FMN1Q68DA7 1419 aa20.72■□□□□ 0.91
MSH5-206ENST00000423982 CARMIL2Q6F5E8 1435 aa20.69■□□□□ 0.9
MSH5-206ENST00000423982 TSHZ2Q9NRE2 1034 aa20.68■□□□□ 0.9
MSH5-206ENST00000423982 ERCC6L2Q5T890 1561 aa20.67■□□□□ 0.9
MSH5-206ENST00000423982 OSCARQ8IYS5 282 aa20.67■□□□□ 0.9
MSH5-206ENST00000423982 CASKIN1Q8WXD9 1431 aa20.65■□□□□ 0.9
MSH5-206ENST00000423982 PLB1Q6P1J6 1458 aa20.63■□□□□ 0.89
MSH5-206ENST00000423982 FYCO1Q9BQS8 1478 aa20.63■□□□□ 0.89
MSH5-206ENST00000423982 RRBP1Q9P2E9 1410 aaKnown RBP20.63■□□□□ 0.89
MSH5-206ENST00000423982 BCANQ96GW7 911 aa20.61■□□□□ 0.89
MSH5-206ENST00000423982 CLASP1Q7Z460 1538 aa20.61■□□□□ 0.89
MSH5-206ENST00000423982 CCNB3Q8WWL7 1395 aa20.58■□□□□ 0.89
MSH5-206ENST00000423982 TIAM1Q13009 1591 aa20.58■□□□□ 0.88
MSH5-206ENST00000423982 CDK13Q14004 1512 aaKnown RBP20.57■□□□□ 0.88
MSH5-206ENST00000423982 PTPRGP23470 1445 aa20.57■□□□□ 0.88
MSH5-206ENST00000423982 LRRIQ1Q96JM4 1722 aa20.55■□□□□ 0.88
MSH5-206ENST00000423982 SHROOM2Q13796 1616 aa20.53■□□□□ 0.88
MSH5-206ENST00000423982 MTUS2Q5JR59 1369 aa20.53■□□□□ 0.88
MSH5-206ENST00000423982 RAB3GAP2Q9H2M9 1393 aa20.53■□□□□ 0.88
MSH5-206ENST00000423982 LRRC9Q6ZRR7 1453 aa20.52■□□□□ 0.88
MSH5-206ENST00000423982 NUP153P49790 1475 aaKnown RBP20.51■□□□□ 0.87
MSH5-206ENST00000423982 EPRSP07814 1512 aaKnown RBP20.5■□□□□ 0.87
MSH5-206ENST00000423982 HECW1Q76N89 1606 aa20.5■□□□□ 0.87
MSH5-206ENST00000423982 MAPKBP1O60336 1514 aa20.5■□□□□ 0.87
MSH5-206ENST00000423982 RAPGEF6Q8TEU7 1601 aa20.5■□□□□ 0.87
MSH5-206ENST00000423982 DDX10Q13206 875 aaKnown RBP20.49■□□□□ 0.87
MSH5-206ENST00000423982 SIN3AQ96ST3 1273 aa20.48■□□□□ 0.87
MSH5-206ENST00000423982 CFAP43Q8NDM7 1665 aa20.47■□□□□ 0.87
MSH5-206ENST00000423982 HIRIP3Q9BW71 556 aaPredicted RBP20.47■□□□□ 0.87
MSH5-206ENST00000423982 FKBP8Q14318 412 aa20.46■□□□□ 0.87
MSH5-206ENST00000423982 MAGI3Q5TCQ9 1506 aa20.44■□□□□ 0.86
MSH5-206ENST00000423982 ANP32EQ9BTT0 268 aa20.43■□□□□ 0.86
MSH5-206ENST00000423982 PHLDB1Q86UU1 1377 aa20.43■□□□□ 0.86
MSH5-206ENST00000423982 MAP3K1Q13233 1512 aa20.42■□□□□ 0.86
MSH5-206ENST00000423982 CCDC18Q5T9S5 1454 aa20.42■□□□□ 0.86
MSH5-206ENST00000423982 ABCA8O94911 1581 aa20.4■□□□□ 0.86
MSH5-206ENST00000423982 UACAQ9BZF9 1416 aa20.4■□□□□ 0.86
MSH5-206ENST00000423982 FAM50AQ14320 339 aaKnown RBP20.38■□□□□ 0.85
MSH5-206ENST00000423982 ATP10BO94823 1461 aa20.36■□□□□ 0.85
MSH5-206ENST00000423982 CDK11AQ9UQ88 783 aaPredicted RBP20.35■□□□□ 0.85
MSH5-206ENST00000423982 TRIM52Q96A61 297 aa20.35■□□□□ 0.85
MSH5-206ENST00000423982 SETD5Q9C0A6 1442 aa20.35■□□□□ 0.85
MSH5-206ENST00000423982 NCOA2Q15596 1464 aa20.33■□□□□ 0.85
MSH5-206ENST00000423982 PLEKHD1A6NEE1 506 aa20.33■□□□□ 0.84
MSH5-206ENST00000423982 CYB5RLQ6IPT4 315 aa20.32■□□□□ 0.84
MSH5-206ENST00000423982 EHBP1L1Q8N3D4 1523 aa20.32■□□□□ 0.84
MSH5-206ENST00000423982 PPP1R15AO75807 674 aaPredicted RBP20.31■□□□□ 0.84
MSH5-206ENST00000423982 ABCC2Q92887 1545 aa20.29■□□□□ 0.84
MSH5-206ENST00000423982 ARHGEF11O15085 1522 aa20.29■□□□□ 0.84
MSH5-206ENST00000423982 SUPT6HQ7KZ85 1726 aaKnown RBP20.27■□□□□ 0.83
MSH5-206ENST00000423982 TROQ12816 1431 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms