RNA–Protein interactions for RNA: ENST00000423325.6

SRPK1-205, Transcript of SRSF protein kinase 1, humanhuman

TSL 2 BASIC

Gene SRPK1, Length 4,357 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-205ENST00000423325 PCF11O94913 1555 aaKnown RBP14.59□□□□□ -0.07
SRPK1-205ENST00000423325 ZNF608Q9ULD9 1512 aaPredicted RBP14.58□□□□□ -0.08
SRPK1-205ENST00000423325 CTTNBP2Q8WZ74 1663 aa14.57□□□□□ -0.08
SRPK1-205ENST00000423325 MRC2Q9UBG0 1479 aa14.57□□□□□ -0.08
SRPK1-205ENST00000423325 TIAM1Q13009 1591 aa14.55□□□□□ -0.08
SRPK1-205ENST00000423325 ATP1B4Q9UN42 357 aaPredicted RBP14.53□□□□□ -0.08
SRPK1-205ENST00000423325 PBRM1Q86U86 1689 aa14.53□□□□□ -0.08
SRPK1-205ENST00000423325 RRBP1Q9P2E9 1410 aaKnown RBP14.51□□□□□ -0.09
SRPK1-205ENST00000423325 PHLDB1Q86UU1 1377 aa14.5□□□□□ -0.09
SRPK1-205ENST00000423325 ITGAEP38570 1179 aa14.49□□□□□ -0.09
SRPK1-205ENST00000423325 LRRC9Q6ZRR7 1453 aa14.49□□□□□ -0.09
SRPK1-205ENST00000423325 LRRIQ1Q96JM4 1722 aa14.49□□□□□ -0.09
SRPK1-205ENST00000423325 WDR62O43379 1518 aa14.49□□□□□ -0.09
SRPK1-205ENST00000423325 CFAP43Q8NDM7 1665 aa14.46□□□□□ -0.09
SRPK1-205ENST00000423325 SNAPC4Q5SXM2 1469 aa14.46□□□□□ -0.09
SRPK1-205ENST00000423325 SAMD9Q5K651 1589 aa14.46□□□□□ -0.09
SRPK1-205ENST00000423325 CCNB3Q8WWL7 1395 aa14.46□□□□□ -0.09
SRPK1-205ENST00000423325 ADAMTS12P58397 1594 aa14.46□□□□□ -0.1
SRPK1-205ENST00000423325 EFCAB5A4FU69 1503 aa14.46□□□□□ -0.1
SRPK1-205ENST00000423325 FHAD1B1AJZ9 1412 aa14.45□□□□□ -0.1
SRPK1-205ENST00000423325 ERCC6Q03468 1493 aa14.43□□□□□ -0.1
SRPK1-205ENST00000423325 MAP3K1Q13233 1512 aa14.43□□□□□ -0.1
SRPK1-205ENST00000423325 THOC2Q8NI27 1593 aaKnown RBP14.43□□□□□ -0.1
SRPK1-205ENST00000423325 CASKIN1Q8WXD9 1431 aa14.43□□□□□ -0.1
SRPK1-205ENST00000423325 FYCO1Q9BQS8 1478 aa14.42□□□□□ -0.1
SRPK1-205ENST00000423325 GRIN2BQ13224 1484 aa14.41□□□□□ -0.1
SRPK1-205ENST00000423325 EIF4G3O43432 1585 aaKnown RBP14.41□□□□□ -0.1
SRPK1-205ENST00000423325 IFT140Q96RY7 1462 aa14.41□□□□□ -0.1
SRPK1-205ENST00000423325 DHX57Q6P158 1386 aaKnown RBP14.4□□□□□ -0.1
SRPK1-205ENST00000423325 ARID3CA6NKF2 412 aa14.37□□□□□ -0.11
SRPK1-205ENST00000423325 MAGI3Q5TCQ9 1506 aa14.36□□□□□ -0.11
SRPK1-205ENST00000423325 IQGAP2Q13576 1575 aa14.36□□□□□ -0.11
SRPK1-205ENST00000423325 FMN1Q68DA7 1419 aa14.36□□□□□ -0.11
SRPK1-205ENST00000423325 FAM50AQ14320 339 aaKnown RBP14.35□□□□□ -0.11
SRPK1-205ENST00000423325 RAB3GAP2Q9H2M9 1393 aa14.31□□□□□ -0.12
SRPK1-205ENST00000423325 GRIN2AQ12879 1464 aa14.3□□□□□ -0.12
SRPK1-205ENST00000423325 CDK13Q14004 1512 aaKnown RBP14.3□□□□□ -0.12
SRPK1-205ENST00000423325 DISP1Q96F81 1524 aa14.29□□□□□ -0.12
SRPK1-205ENST00000423325 MTUS2Q5JR59 1369 aa14.28□□□□□ -0.12
SRPK1-205ENST00000423325 PTPRKQ15262 1439 aa14.28□□□□□ -0.12
SRPK1-205ENST00000423325 CEP170Q5SW79 1584 aa14.28□□□□□ -0.12
SRPK1-205ENST00000423325 FBLN2P98095 1184 aa14.27□□□□□ -0.12
SRPK1-205ENST00000423325 UGGT2Q9NYU1 1516 aa14.26□□□□□ -0.13
SRPK1-205ENST00000423325 NCOA2Q15596 1464 aa14.26□□□□□ -0.13
SRPK1-205ENST00000423325 FGD6Q6ZV73 1430 aa14.26□□□□□ -0.13
SRPK1-205ENST00000423325 MAPKBP1O60336 1514 aa14.25□□□□□ -0.13
SRPK1-205ENST00000423325 KIAA0586Q9BVV6 1533 aa14.24□□□□□ -0.13
SRPK1-205ENST00000423325 DIEXFQ68CQ4 756 aaKnown RBP14.24□□□□□ -0.13
SRPK1-205ENST00000423325 KIAA0556O60303 1618 aa14.23□□□□□ -0.13
SRPK1-205ENST00000423325 EPRSP07814 1512 aaKnown RBP14.23□□□□□ -0.13
SRPK1-205ENST00000423325 SETD5Q9C0A6 1442 aa14.22□□□□□ -0.13
SRPK1-205ENST00000423325 ZNF316A6NFI3 1004 aaPredicted RBP14.22□□□□□ -0.13
SRPK1-205ENST00000423325 CHMP7Q8WUX9 453 aaPredicted RBP14.22□□□□□ -0.13
SRPK1-205ENST00000423325 SYNJ2O15056 1496 aa14.2□□□□□ -0.14
SRPK1-205ENST00000423325 MAGI1Q96QZ7 1491 aaPredicted RBP14.2□□□□□ -0.14
SRPK1-205ENST00000423325 ARHGEF11O15085 1522 aa14.2□□□□□ -0.14
SRPK1-205ENST00000423325 HECW1Q76N89 1606 aa14.19□□□□□ -0.14
SRPK1-205ENST00000423325 EHBP1L1Q8N3D4 1523 aa14.18□□□□□ -0.14
SRPK1-205ENST00000423325 MYOM3Q5VTT5 1437 aa14.18□□□□□ -0.14
SRPK1-205ENST00000423325 SUPT6HQ7KZ85 1726 aaKnown RBP14.18□□□□□ -0.14
SRPK1-205ENST00000423325 NUP153P49790 1475 aaKnown RBP14.18□□□□□ -0.14
SRPK1-205ENST00000423325 SIN3AQ96ST3 1273 aa14.17□□□□□ -0.14
SRPK1-205ENST00000423325 PLB1Q6P1J6 1458 aa14.17□□□□□ -0.14
SRPK1-205ENST00000423325 CCDC18Q5T9S5 1454 aa14.15□□□□□ -0.14
SRPK1-205ENST00000423325 NUP160Q12769 1436 aa14.14□□□□□ -0.15
SRPK1-205ENST00000423325 PTPN23Q9H3S7 1636 aa14.14□□□□□ -0.15
SRPK1-205ENST00000423325 CLSPNQ9HAW4 1339 aa14.14□□□□□ -0.15
SRPK1-205ENST00000423325 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.13□□□□□ -0.15
SRPK1-205ENST00000423325 CHIC2Q9UKJ5 165 aa14.12□□□□□ -0.15
SRPK1-205ENST00000423325 RAPGEF6Q8TEU7 1601 aa14.12□□□□□ -0.15
SRPK1-205ENST00000423325 JPH4Q96JJ6 628 aa14.12□□□□□ -0.15
SRPK1-205ENST00000423325 ZNF644Q9H582 1327 aaPredicted RBP14.11□□□□□ -0.15
SRPK1-205ENST00000423325 KDM6BO15054 1643 aa14.1□□□□□ -0.15
SRPK1-205ENST00000423325 NAIPQ13075 1403 aa14.1□□□□□ -0.15
SRPK1-205ENST00000423325 PRG4Q92954 1404 aaPredicted RBP14.1□□□□□ -0.15
SRPK1-205ENST00000423325 NEUROD1Q13562 356 aa14.09□□□□□ -0.15
SRPK1-205ENST00000423325 RRP7BPQ9NSQ0 103 aa14.09□□□□□ -0.15
SRPK1-205ENST00000423325 HFM1A2PYH4 1435 aa14.08□□□□□ -0.16
SRPK1-205ENST00000423325 MIER1Q8N108 512 aa14.07□□□□□ -0.16
SRPK1-205ENST00000423325 TCOF1Q13428 1488 aaKnown RBP14.06□□□□□ -0.16
SRPK1-205ENST00000423325 KIF14Q15058 1648 aa14.05□□□□□ -0.16
SRPK1-205ENST00000423325 CHD1O14646 1710 aa14.05□□□□□ -0.16
SRPK1-205ENST00000423325 DENND4BO75064 1496 aaPredicted RBP14.03□□□□□ -0.16
SRPK1-205ENST00000423325 ERCC6L2Q5T890 1561 aa14.02□□□□□ -0.17
SRPK1-205ENST00000423325 ABCA8O94911 1581 aa13.99□□□□□ -0.17
SRPK1-205ENST00000423325 CARMIL2Q6F5E8 1435 aa13.98□□□□□ -0.17
SRPK1-205ENST00000423325 TROQ12816 1431 aaPredicted RBP13.98□□□□□ -0.17
SRPK1-205ENST00000423325 MIA2Q96PC5 1412 aa13.98□□□□□ -0.17
SRPK1-205ENST00000423325 UACAQ9BZF9 1416 aa13.98□□□□□ -0.17
SRPK1-205ENST00000423325 HIRIP3Q9BW71 556 aaPredicted RBP13.97□□□□□ -0.17
SRPK1-205ENST00000423325 SCAF1Q9H7N4 1312 aaKnown RBP13.97□□□□□ -0.17
SRPK1-205ENST00000423325 ABCC5O15440 1437 aa13.97□□□□□ -0.17
SRPK1-205ENST00000423325 ATP10BO94823 1461 aa13.97□□□□□ -0.17
SRPK1-205ENST00000423325 FOXD1Q16676 465 aa13.97□□□□□ -0.17
SRPK1-205ENST00000423325 GCC2Q8IWJ2 1684 aa13.96□□□□□ -0.17
SRPK1-205ENST00000423325 DAPK1P53355 1430 aa13.96□□□□□ -0.17
SRPK1-205ENST00000423325 GPATCH8Q9UKJ3 1502 aaKnown RBP13.96□□□□□ -0.18
SRPK1-205ENST00000423325 YTHDC1Q96MU7 727 aaKnown RBP13.94□□□□□ -0.18
SRPK1-205ENST00000423325 ZNF777Q9ULD5 760 aaPredicted RBP13.94□□□□□ -0.18
SRPK1-205ENST00000423325 DNMT1P26358 1616 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms