RNA–Protein interactions for RNA: ENST00000423325.6

SRPK1-205, Transcript of SRSF protein kinase 1, humanhuman

TSL 2 BASIC

Gene SRPK1, Length 4,357 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-205ENST00000423325 NISCHQ9Y2I1 1504 aa21.01■□□□□ 0.95
SRPK1-205ENST00000423325 CCDC180Q9P1Z9 1646 aa17.97■□□□□ 0.47
SRPK1-205ENST00000423325 SHROOM4Q9ULL8 1493 aa17.74■□□□□ 0.43
SRPK1-205ENST00000423325 ZCCHC6Q5VYS8 1495 aaKnown RBP17.71■□□□□ 0.43
SRPK1-205ENST00000423325 DCAF8L2P0C7V8 631 aa17.5■□□□□ 0.39
SRPK1-205ENST00000423325 DCAF1Q9Y4B6 1507 aa17.17■□□□□ 0.34
SRPK1-205ENST00000423325 SUPT5HO00267 1087 aaKnown RBP17.16■□□□□ 0.34
SRPK1-205ENST00000423325 ABCC9O60706 1549 aa17.05■□□□□ 0.32
SRPK1-205ENST00000423325 SCRIBQ14160 1630 aa16.89■□□□□ 0.29
SRPK1-205ENST00000423325 MYO15BQ96JP2 1530 aa16.78■□□□□ 0.28
SRPK1-205ENST00000423325 NACADO15069 1562 aa16.68■□□□□ 0.26
SRPK1-205ENST00000423325 RSF1Q96T23 1441 aaPredicted RBP16.52■□□□□ 0.23
SRPK1-205ENST00000423325 CHIC1Q5VXU3 224 aa16.52■□□□□ 0.23
SRPK1-205ENST00000423325 CECR2Q9BXF3 1484 aa16.51■□□□□ 0.23
SRPK1-205ENST00000423325 RB1CC1Q8TDY2 1594 aa16.49■□□□□ 0.23
SRPK1-205ENST00000423325 UNC13AQ9UPW8 1703 aa16.4■□□□□ 0.22
SRPK1-205ENST00000423325 MROH2BQ7Z745 1585 aa16.38■□□□□ 0.21
SRPK1-205ENST00000423325 WIZO95785 1651 aa16.28■□□□□ 0.2
SRPK1-205ENST00000423325 PABPN1Q86U42 306 aaKnown RBP eCLIP16.25■□□□□ 0.191e-9■□□□□ 9.3
SRPK1-205ENST00000423325 BICRAQ9NZM4 1560 aa16.2■□□□□ 0.18
SRPK1-205ENST00000423325 BAZ1AQ9NRL2 1556 aaPredicted RBP16.11■□□□□ 0.17
SRPK1-205ENST00000423325 SMARCA4P51532 1647 aa16.09■□□□□ 0.17
SRPK1-205ENST00000423325 LOC105371045A0A1W2PR82 267 aa16.08■□□□□ 0.17
SRPK1-205ENST00000423325 TOP2AP11388 1531 aaKnown RBP15.94■□□□□ 0.14
SRPK1-205ENST00000423325 TRIM41Q8WV44 630 aa15.93■□□□□ 0.14
SRPK1-205ENST00000423325 EIF4G1Q04637 1599 aaKnown RBP15.93■□□□□ 0.14
SRPK1-205ENST00000423325 CCDC88BA6NC98 1476 aa15.91■□□□□ 0.14
SRPK1-205ENST00000423325 FAM9AQ8IZU1 332 aaPredicted RBP15.89■□□□□ 0.13
SRPK1-205ENST00000423325 SMARCA2P51531 1590 aa15.89■□□□□ 0.13
SRPK1-205ENST00000423325 EHMT2Q96KQ7 1210 aa15.83■□□□□ 0.12
SRPK1-205ENST00000423325 ABCC8Q09428 1581 aa15.81■□□□□ 0.12
SRPK1-205ENST00000423325 PEG3Q9GZU2 1588 aa15.77■□□□□ 0.11
SRPK1-205ENST00000423325 ATAD2BQ9ULI0 1458 aa15.75■□□□□ 0.11
SRPK1-205ENST00000423325 BAZ1BQ9UIG0 1483 aaKnown RBP15.65■□□□□ 0.1
SRPK1-205ENST00000423325 PCGF6Q9BYE7 350 aa15.62■□□□□ 0.09
SRPK1-205ENST00000423325 SOGA1O94964 1423 aa15.57■□□□□ 0.08
SRPK1-205ENST00000423325 RUSC2Q8N2Y8 1516 aa15.56■□□□□ 0.08
SRPK1-205ENST00000423325 SYNJ1O43426 1573 aa15.51■□□□□ 0.07
SRPK1-205ENST00000423325 WRNQ14191 1432 aaPredicted RBP eCLIP15.47■□□□□ 0.07
SRPK1-205ENST00000423325 NCAPD3P42695 1498 aa15.47■□□□□ 0.07
SRPK1-205ENST00000423325 HMGXB3Q12766 1538 aa15.43■□□□□ 0.06
SRPK1-205ENST00000423325 PPARGC1BQ86YN6 1023 aaKnown RBP15.4■□□□□ 0.06
SRPK1-205ENST00000423325 CC2D2AQ9P2K1 1620 aa15.34■□□□□ 0.05
SRPK1-205ENST00000423325 HRCP23327 699 aa15.34■□□□□ 0.05
SRPK1-205ENST00000423325 CSRNP3Q8WYN3 585 aa15.33■□□□□ 0.04
SRPK1-205ENST00000423325 TRIM26Q12899 539 aaPredicted RBP15.31■□□□□ 0.04
SRPK1-205ENST00000423325 TOP2BQ02880 1626 aa15.27■□□□□ 0.04
SRPK1-205ENST00000423325 CFTRP13569 1480 aa15.27■□□□□ 0.04
SRPK1-205ENST00000423325 CUX1P39880 1505 aa15.26■□□□□ 0.03
SRPK1-205ENST00000423325 CEP162Q5TB80 1403 aa15.26■□□□□ 0.03
SRPK1-205ENST00000423325 DNAJC5BQ9UF47 199 aa15.25■□□□□ 0.03
SRPK1-205ENST00000423325 BIVM-ERCC5R4GMW8 1640 aa15.23■□□□□ 0.03
SRPK1-205ENST00000423325 EEA1Q15075 1411 aa15.22■□□□□ 0.03
SRPK1-205ENST00000423325 UBTFP17480 764 aaKnown RBP15.22■□□□□ 0.03
SRPK1-205ENST00000423325 TNIKQ9UKE5 1360 aa15.21■□□□□ 0.02
SRPK1-205ENST00000423325 TTBK1Q5TCY1 1321 aaPredicted RBP15.2■□□□□ 0.02
SRPK1-205ENST00000423325 RAPGEF2Q9Y4G8 1499 aa15.19■□□□□ 0.02
SRPK1-205ENST00000423325 GOLGA3Q08378 1498 aa15.18■□□□□ 0.02
SRPK1-205ENST00000423325 CADPSQ9ULU8 1353 aa15.15■□□□□ 0.02
SRPK1-205ENST00000423325 NESP48681 1621 aa15.14■□□□□ 0.01
SRPK1-205ENST00000423325 KIF21BO75037 1637 aa15.14■□□□□ 0.01
SRPK1-205ENST00000423325 RANGAP1P46060 587 aaPredicted RBP15.13■□□□□ 0.01
SRPK1-205ENST00000423325 CEP164Q9UPV0 1460 aa15.12■□□□□ 0.01
SRPK1-205ENST00000423325 PRDM2Q13029 1718 aa15.11■□□□□ 0.01
SRPK1-205ENST00000423325 PRXQ9BXM0 1461 aa15.04■□□□□ -0
SRPK1-205ENST00000423325 FANCD2Q9BXW9 1451 aa15.02■□□□□ -0
SRPK1-205ENST00000423325 CLIP1P30622 1438 aa15.02□□□□□ -0.01
SRPK1-205ENST00000423325 FGD5Q6ZNL6 1462 aa15.01□□□□□ -0.01
SRPK1-205ENST00000423325 KIF27Q86VH2 1401 aa14.98□□□□□ -0.01
SRPK1-205ENST00000423325 CUX2O14529 1486 aa14.98□□□□□ -0.01
SRPK1-205ENST00000423325 RAD54L2Q9Y4B4 1467 aa14.95□□□□□ -0.02
SRPK1-205ENST00000423325 ERICH3Q5RHP9 1530 aa14.93□□□□□ -0.02
SRPK1-205ENST00000423325 IGF1RP08069 1367 aa14.93□□□□□ -0.02
SRPK1-205ENST00000423325 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.91□□□□□ -0.02
SRPK1-205ENST00000423325 TOPBP1Q92547 1522 aa14.9□□□□□ -0.02
SRPK1-205ENST00000423325 VPS8Q8N3P4 1428 aa14.9□□□□□ -0.02
SRPK1-205ENST00000423325 ARAP1Q96P48 1450 aa14.9□□□□□ -0.02
SRPK1-205ENST00000423325 POLA1P09884 1462 aaPredicted RBP14.89□□□□□ -0.03
SRPK1-205ENST00000423325 URB2Q14146 1524 aaKnown RBP14.89□□□□□ -0.03
SRPK1-205ENST00000423325 DNMBPQ6XZF7 1577 aa14.87□□□□□ -0.03
SRPK1-205ENST00000423325 LAMC3Q9Y6N6 1575 aa14.84□□□□□ -0.03
SRPK1-205ENST00000423325 KIF21AQ7Z4S6 1674 aa14.84□□□□□ -0.03
SRPK1-205ENST00000423325 CARMIL1Q5VZK9 1371 aa14.82□□□□□ -0.04
SRPK1-205ENST00000423325 ARHGAP35Q9NRY4 1499 aa14.82□□□□□ -0.04
SRPK1-205ENST00000423325 KANK4Q5T7N3 995 aaPredicted RBP14.79□□□□□ -0.04
SRPK1-205ENST00000423325 ABCA10Q8WWZ4 1543 aa14.79□□□□□ -0.04
SRPK1-205ENST00000423325 TDRD9Q8NDG6 1382 aaKnown RBP14.77□□□□□ -0.05
SRPK1-205ENST00000423325 WDR97A6NE52 1622 aa14.75□□□□□ -0.05
SRPK1-205ENST00000423325 HNRNPUL2Q1KMD3 747 aaKnown RBP14.73□□□□□ -0.05
SRPK1-205ENST00000423325 CCER1Q8TC90 406 aaPredicted RBP14.72□□□□□ -0.05
SRPK1-205ENST00000423325 PDS5BQ9NTI5 1447 aa14.72□□□□□ -0.05
SRPK1-205ENST00000423325 P3H3Q8IVL6 736 aa14.72□□□□□ -0.05
SRPK1-205ENST00000423325 ABCA5Q8WWZ7 1642 aa14.68□□□□□ -0.06
SRPK1-205ENST00000423325 ZEB1P37275 1124 aaPredicted RBP14.67□□□□□ -0.06
SRPK1-205ENST00000423325 APLP2Q06481 763 aa14.67□□□□□ -0.06
SRPK1-205ENST00000423325 TARBP1Q13395 1621 aaKnown RBP14.66□□□□□ -0.06
SRPK1-205ENST00000423325 GAPVD1Q14C86 1478 aa14.63□□□□□ -0.07
SRPK1-205ENST00000423325 FHOD3Q2V2M9 1422 aa14.63□□□□□ -0.07
SRPK1-205ENST00000423325 AQRO60306 1485 aaKnown RBP eCLIP14.61□□□□□ -0.079e-8■■■■□ 21
SRPK1-205ENST00000423325 CUL7Q14999 1698 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms