RNA–Protein interactions for RNA: ENST00000421832.2

CTU1-201, Transcript of cytosolic thiouridylase subunit 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTU1, Length 2,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU1-201ENST00000421832 CLIP1P30622 1438 aa38.7■■■■□ 3.79
CTU1-201ENST00000421832 FBLN2P98095 1184 aa38.69■■■■□ 3.78
CTU1-201ENST00000421832 CHMP7Q8WUX9 453 aaPredicted RBP38.69■■■■□ 3.78
CTU1-201ENST00000421832 CHD1O14646 1710 aa38.59■■■■□ 3.77
CTU1-201ENST00000421832 CEP170Q5SW79 1584 aa38.55■■■■□ 3.76
CTU1-201ENST00000421832 ARHGAP35Q9NRY4 1499 aa38.51■■■■□ 3.76
CTU1-201ENST00000421832 IQGAP2Q13576 1575 aa38.48■■■■□ 3.75
CTU1-201ENST00000421832 NUP160Q12769 1436 aa38.47■■■■□ 3.75
CTU1-201ENST00000421832 KIAA0586Q9BVV6 1533 aa38.44■■■■□ 3.74
CTU1-201ENST00000421832 ARAP1Q96P48 1450 aa38.43■■■■□ 3.74
CTU1-201ENST00000421832 P3H3Q8IVL6 736 aa38.34■■■■□ 3.73
CTU1-201ENST00000421832 SAMD9Q5K651 1589 aa38.32■■■■□ 3.73
CTU1-201ENST00000421832 EFCAB5A4FU69 1503 aa38.32■■■■□ 3.72
CTU1-201ENST00000421832 VPS8Q8N3P4 1428 aa38.28■■■■□ 3.72
CTU1-201ENST00000421832 UGGT2Q9NYU1 1516 aa38.27■■■■□ 3.72
CTU1-201ENST00000421832 FHOD3Q2V2M9 1422 aa38.26■■■■□ 3.72
CTU1-201ENST00000421832 DISP1Q96F81 1524 aa38.15■■■■□ 3.7
CTU1-201ENST00000421832 JPH4Q96JJ6 628 aa38.15■■■■□ 3.7
CTU1-201ENST00000421832 KIAA0556O60303 1618 aa38.11■■■■□ 3.69
CTU1-201ENST00000421832 PELP1Q8IZL8 1130 aaKnown RBP38.11■■■■□ 3.69
CTU1-201ENST00000421832 CLASP1Q7Z460 1538 aa38.1■■■■□ 3.69
CTU1-201ENST00000421832 SHROOM2Q13796 1616 aa38.03■■■■□ 3.68
CTU1-201ENST00000421832 PCGF6Q9BYE7 350 aa38.01■■■■□ 3.68
CTU1-201ENST00000421832 PPARGC1BQ86YN6 1023 aaKnown RBP37.99■■■■□ 3.67
CTU1-201ENST00000421832 PCF11O94913 1555 aaKnown RBP37.98■■■■□ 3.67
CTU1-201ENST00000421832 PRG4Q92954 1404 aaPredicted RBP37.97■■■■□ 3.67
CTU1-201ENST00000421832 FMN1Q68DA7 1419 aa37.96■■■■□ 3.67
CTU1-201ENST00000421832 CARMIL2Q6F5E8 1435 aa37.93■■■■□ 3.66
CTU1-201ENST00000421832 TTBK1Q5TCY1 1321 aaPredicted RBP37.91■■■■□ 3.66
CTU1-201ENST00000421832 OSCARQ8IYS5 282 aa37.89■■■■□ 3.66
CTU1-201ENST00000421832 ERCC6L2Q5T890 1561 aa37.89■■■■□ 3.66
CTU1-201ENST00000421832 CASKIN1Q8WXD9 1431 aa37.86■■■■□ 3.65
CTU1-201ENST00000421832 FYCO1Q9BQS8 1478 aa37.83■■■■□ 3.65
CTU1-201ENST00000421832 ATP1B4Q9UN42 357 aaPredicted RBP37.81■■■■□ 3.64
CTU1-201ENST00000421832 APLP2Q06481 763 aa37.79■■■■□ 3.64
CTU1-201ENST00000421832 LRRIQ1Q96JM4 1722 aa37.77■■■■□ 3.64
CTU1-201ENST00000421832 TIAM1Q13009 1591 aa37.7■■■■□ 3.63
CTU1-201ENST00000421832 PLB1Q6P1J6 1458 aa37.68■■■■□ 3.62
CTU1-201ENST00000421832 KANK4Q5T7N3 995 aaPredicted RBP37.68■■■■□ 3.62
CTU1-201ENST00000421832 RAPGEF6Q8TEU7 1601 aa37.68■■■■□ 3.62
CTU1-201ENST00000421832 CFAP43Q8NDM7 1665 aa37.67■■■■□ 3.62
CTU1-201ENST00000421832 HECW1Q76N89 1606 aa37.66■■■■□ 3.62
CTU1-201ENST00000421832 PTPRGP23470 1445 aa37.65■■■■□ 3.62
CTU1-201ENST00000421832 MAP3K1Q13233 1512 aa37.64■■■■□ 3.62
CTU1-201ENST00000421832 ABCA8O94911 1581 aa37.59■■■■□ 3.61
CTU1-201ENST00000421832 NUP153P49790 1475 aaKnown RBP37.59■■■■□ 3.61
CTU1-201ENST00000421832 ARID3CA6NKF2 412 aa37.57■■■■□ 3.61
CTU1-201ENST00000421832 EPRSP07814 1512 aaKnown RBP37.56■■■■□ 3.6
CTU1-201ENST00000421832 CDK13Q14004 1512 aaKnown RBP37.55■■■■□ 3.6
CTU1-201ENST00000421832 LRRC9Q6ZRR7 1453 aa37.51■■■■□ 3.6
CTU1-201ENST00000421832 CCDC18Q5T9S5 1454 aa37.5■■■■□ 3.59
CTU1-201ENST00000421832 UACAQ9BZF9 1416 aa37.43■■■■□ 3.58
CTU1-201ENST00000421832 TRIM26Q12899 539 aaPredicted RBP37.43■■■■□ 3.58
CTU1-201ENST00000421832 MAGI3Q5TCQ9 1506 aa37.42■■■■□ 3.58
CTU1-201ENST00000421832 ABCC2Q92887 1545 aa37.35■■■■□ 3.57
CTU1-201ENST00000421832 ARHGEF11O15085 1522 aa37.34■■■■□ 3.57
CTU1-201ENST00000421832 MTUS2Q5JR59 1369 aa37.34■■■■□ 3.57
CTU1-201ENST00000421832 ATP10BO94823 1461 aa37.33■■■■□ 3.57
CTU1-201ENST00000421832 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.32■■■■□ 3.56
CTU1-201ENST00000421832 HNRNPUL2Q1KMD3 747 aaKnown RBP37.32■■■■□ 3.56
CTU1-201ENST00000421832 EHBP1L1Q8N3D4 1523 aa37.29■■■■□ 3.56
CTU1-201ENST00000421832 UHRF1BP1LA0JNW5 1464 aa37.24■■■■□ 3.55
CTU1-201ENST00000421832 ADCY10Q96PN6 1610 aa37.23■■■■□ 3.55
CTU1-201ENST00000421832 RIMBP3CA6NJZ7 1639 aa37.21■■■■□ 3.55
CTU1-201ENST00000421832 RIMBP3BA6NNM3 1639 aa37.21■■■■□ 3.55
CTU1-201ENST00000421832 RIMBP3Q9UFD9 1639 aa37.21■■■■□ 3.55
CTU1-201ENST00000421832 PHLDB1Q86UU1 1377 aa37.19■■■■□ 3.54
CTU1-201ENST00000421832 ZEB1P37275 1124 aaPredicted RBP37.19■■■■□ 3.54
CTU1-201ENST00000421832 SUPT6HQ7KZ85 1726 aaKnown RBP37.19■■■■□ 3.54
CTU1-201ENST00000421832 NCOA2Q15596 1464 aa37.16■■■■□ 3.54
CTU1-201ENST00000421832 CDK11AQ9UQ88 783 aaPredicted RBP37.15■■■■□ 3.54
CTU1-201ENST00000421832 ZCCHC11Q5TAX3 1644 aaKnown RBP37.15■■■■□ 3.54
CTU1-201ENST00000421832 KDM5BQ9UGL1 1544 aa37.13■■■■□ 3.53
CTU1-201ENST00000421832 TROQ12816 1431 aaPredicted RBP37.12■■■■□ 3.53
CTU1-201ENST00000421832 KIF14Q15058 1648 aa37.06■■■■□ 3.52
CTU1-201ENST00000421832 PLEKHD1A6NEE1 506 aa37.06■■■■□ 3.52
CTU1-201ENST00000421832 RRBP1Q9P2E9 1410 aaKnown RBP37.04■■■■□ 3.52
CTU1-201ENST00000421832 CYB5RLQ6IPT4 315 aa37■■■■□ 3.51
CTU1-201ENST00000421832 CCNB3Q8WWL7 1395 aa36.96■■■■□ 3.51
CTU1-201ENST00000421832 MYOM3Q5VTT5 1437 aa36.95■■■■□ 3.51
CTU1-201ENST00000421832 FGD6Q6ZV73 1430 aa36.92■■■■□ 3.5
CTU1-201ENST00000421832 ABCC10Q5T3U5 1492 aa36.87■■■■□ 3.49
CTU1-201ENST00000421832 KCNH8Q96L42 1107 aa36.82■■■■□ 3.48
CTU1-201ENST00000421832 FAM50AQ14320 339 aaKnown RBP36.81■■■■□ 3.48
CTU1-201ENST00000421832 NPM1P06748 294 aaKnown RBP eCLIP36.8■■■■□ 3.48
CTU1-201ENST00000421832 GPATCH8Q9UKJ3 1502 aaKnown RBP36.8■■■■□ 3.48
CTU1-201ENST00000421832 CDC42BPAQ5VT25 1732 aa36.8■■■■□ 3.48
CTU1-201ENST00000421832 MYT1Q01538 1121 aa36.79■■■■□ 3.48
CTU1-201ENST00000421832 WDR7Q9Y4E6 1490 aa36.79■■■■□ 3.48
CTU1-201ENST00000421832 ASXL2Q76L83 1435 aa36.79■■■■□ 3.48
CTU1-201ENST00000421832 PTPN23Q9H3S7 1636 aa36.79■■■■□ 3.48
CTU1-201ENST00000421832 TTC37Q6PGP7 1564 aa36.78■■■■□ 3.48
CTU1-201ENST00000421832 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.78■■■■□ 3.48
CTU1-201ENST00000421832 SCAF1Q9H7N4 1312 aaKnown RBP36.78■■■■□ 3.48
CTU1-201ENST00000421832 ITSN2Q9NZM3 1697 aa36.76■■■■□ 3.47
CTU1-201ENST00000421832 MIA2Q96PC5 1412 aa36.74■■■■□ 3.47
CTU1-201ENST00000421832 ITGAEP38570 1179 aa36.71■■■■□ 3.47
CTU1-201ENST00000421832 TCOF1Q13428 1488 aaKnown RBP36.69■■■■□ 3.46
CTU1-201ENST00000421832 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.69■■■■□ 3.46
CTU1-201ENST00000421832 CDC42BPBQ9Y5S2 1711 aa36.66■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms