RNA–Protein interactions for RNA: ENST00000419807.5

PPM1B-208, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, human

TSL 5

Gene PPM1B, Length 2,084 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPM1B-208	ENST00000419807	FHAD1	B1AJZ9	1412 aa		33.14	■■■□□ 2.89
PPM1B-208	ENST00000419807	EFCAB5	A4FU69	1503 aa		33.11	■■■□□ 2.89
PPM1B-208	ENST00000419807	AQR	O60306	1485 aa	Known RBP eCLIP	33.1	■■■□□ 2.89
PPM1B-208	ENST00000419807	WDR62	O43379	1518 aa		33.09	■■■□□ 2.89
PPM1B-208	ENST00000419807	FHOD3	Q2V2M9	1422 aa		33.07	■■■□□ 2.88
PPM1B-208	ENST00000419807	ERCC6	Q03468	1493 aa		33.05	■■■□□ 2.88
PPM1B-208	ENST00000419807	MAP3K1	Q13233	1512 aa		33.05	■■■□□ 2.88
PPM1B-208	ENST00000419807	PBRM1	Q86U86	1689 aa		33.04	■■■□□ 2.88
PPM1B-208	ENST00000419807	IFT140	Q96RY7	1462 aa		33.03	■■■□□ 2.88
PPM1B-208	ENST00000419807	TIAM1	Q13009	1591 aa		33.03	■■■□□ 2.88
PPM1B-208	ENST00000419807	PCF11	O94913	1555 aa	Known RBP	32.98	■■■□□ 2.87
PPM1B-208	ENST00000419807	ATP1B4	Q9UN42	357 aa	Predicted RBP	32.98	■■■□□ 2.87
PPM1B-208	ENST00000419807	GRIN2B	Q13224	1484 aa		32.97	■■■□□ 2.87
PPM1B-208	ENST00000419807	RRBP1	Q9P2E9	1410 aa	Known RBP	32.96	■■■□□ 2.87
PPM1B-208	ENST00000419807	ZNF608	Q9ULD9	1512 aa	Predicted RBP	32.94	■■■□□ 2.86
PPM1B-208	ENST00000419807	LRRC9	Q6ZRR7	1453 aa		32.91	■■■□□ 2.86
PPM1B-208	ENST00000419807	FMN1	Q68DA7	1419 aa		32.9	■■■□□ 2.86
PPM1B-208	ENST00000419807	FYCO1	Q9BQS8	1478 aa		32.9	■■■□□ 2.86
PPM1B-208	ENST00000419807	ADAMTS12	P58397	1594 aa		32.9	■■■□□ 2.86
PPM1B-208	ENST00000419807	CASKIN1	Q8WXD9	1431 aa		32.9	■■■□□ 2.86
PPM1B-208	ENST00000419807	SAMD9	Q5K651	1589 aa		32.87	■■■□□ 2.85
PPM1B-208	ENST00000419807	CCNB3	Q8WWL7	1395 aa		32.87	■■■□□ 2.85
PPM1B-208	ENST00000419807	CFAP43	Q8NDM7	1665 aa		32.85	■■■□□ 2.85
PPM1B-208	ENST00000419807	THOC2	Q8NI27	1593 aa	Known RBP	32.83	■■■□□ 2.85
PPM1B-208	ENST00000419807	SNAPC4	Q5SXM2	1469 aa		32.76	■■■□□ 2.83
PPM1B-208	ENST00000419807	EIF4G3	O43432	1585 aa	Known RBP	32.74	■■■□□ 2.83
PPM1B-208	ENST00000419807	IQGAP2	Q13576	1575 aa		32.73	■■■□□ 2.83
PPM1B-208	ENST00000419807	PHLDB1	Q86UU1	1377 aa		32.72	■■■□□ 2.83
PPM1B-208	ENST00000419807	ITGAE	P38570	1179 aa		32.67	■■■□□ 2.82
PPM1B-208	ENST00000419807	GRIN2A	Q12879	1464 aa		32.59	■■■□□ 2.81
PPM1B-208	ENST00000419807	MTUS2	Q5JR59	1369 aa		32.57	■■■□□ 2.81
PPM1B-208	ENST00000419807	FAM50A	Q14320	339 aa	Known RBP	32.57	■■■□□ 2.8
PPM1B-208	ENST00000419807	KIAA0586	Q9BVV6	1533 aa		32.57	■■■□□ 2.8
PPM1B-208	ENST00000419807	MAGI1	Q96QZ7	1491 aa	Predicted RBP	32.56	■■■□□ 2.8
PPM1B-208	ENST00000419807	UGGT2	Q9NYU1	1516 aa		32.55	■■■□□ 2.8
PPM1B-208	ENST00000419807	LRRIQ1	Q96JM4	1722 aa		32.55	■■■□□ 2.8
PPM1B-208	ENST00000419807	CHMP7	Q8WUX9	453 aa	Predicted RBP	32.53	■■■□□ 2.8
PPM1B-208	ENST00000419807	DHX57	Q6P158	1386 aa	Known RBP	32.52	■■■□□ 2.8
PPM1B-208	ENST00000419807	SYNJ2	O15056	1496 aa		32.48	■■■□□ 2.79
PPM1B-208	ENST00000419807	CLSPN	Q9HAW4	1339 aa		32.47	■■■□□ 2.79
PPM1B-208	ENST00000419807	FBLN2	P98095	1184 aa		32.46	■■■□□ 2.79
PPM1B-208	ENST00000419807	CCDC18	Q5T9S5	1454 aa		32.44	■■■□□ 2.78
PPM1B-208	ENST00000419807	HECW1	Q76N89	1606 aa		32.43	■■■□□ 2.78
PPM1B-208	ENST00000419807	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.4	■■■□□ 2.78
PPM1B-208	ENST00000419807	DISP1	Q96F81	1524 aa		32.4	■■■□□ 2.78
PPM1B-208	ENST00000419807	FGD6	Q6ZV73	1430 aa		32.38	■■■□□ 2.77
PPM1B-208	ENST00000419807	EHBP1L1	Q8N3D4	1523 aa		32.38	■■■□□ 2.77
PPM1B-208	ENST00000419807	RAB3GAP2	Q9H2M9	1393 aa		32.38	■■■□□ 2.77
PPM1B-208	ENST00000419807	KIAA0556	O60303	1618 aa		32.38	■■■□□ 2.77
PPM1B-208	ENST00000419807	NCOA2	Q15596	1464 aa		32.37	■■■□□ 2.77
PPM1B-208	ENST00000419807	SETD5	Q9C0A6	1442 aa		32.35	■■■□□ 2.77
PPM1B-208	ENST00000419807	CEP170	Q5SW79	1584 aa		32.35	■■■□□ 2.77
PPM1B-208	ENST00000419807	EPRS	P07814	1512 aa	Known RBP	32.35	■■■□□ 2.77
PPM1B-208	ENST00000419807	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.35	■■■□□ 2.77
PPM1B-208	ENST00000419807	MAGI3	Q5TCQ9	1506 aa		32.31	■■■□□ 2.76
PPM1B-208	ENST00000419807	MYOM3	Q5VTT5	1437 aa		32.29	■■■□□ 2.76
PPM1B-208	ENST00000419807	ARID3C	A6NKF2	412 aa		32.27	■■■□□ 2.76
PPM1B-208	ENST00000419807	CDK13	Q14004	1512 aa	Known RBP	32.27	■■■□□ 2.76
PPM1B-208	ENST00000419807	NUP160	Q12769	1436 aa		32.27	■■■□□ 2.76
PPM1B-208	ENST00000419807	ZNF316	A6NFI3	1004 aa	Predicted RBP	32.25	■■■□□ 2.75
PPM1B-208	ENST00000419807	ARHGEF11	O15085	1522 aa		32.22	■■■□□ 2.75
PPM1B-208	ENST00000419807	JPH4	Q96JJ6	628 aa		32.22	■■■□□ 2.75
PPM1B-208	ENST00000419807	DIEXF	Q68CQ4	756 aa	Known RBP	32.19	■■■□□ 2.74
PPM1B-208	ENST00000419807	CARMIL2	Q6F5E8	1435 aa		32.16	■■■□□ 2.74
PPM1B-208	ENST00000419807	RAPGEF6	Q8TEU7	1601 aa		32.16	■■■□□ 2.74
PPM1B-208	ENST00000419807	NUP153	P49790	1475 aa	Known RBP	32.15	■■■□□ 2.74
PPM1B-208	ENST00000419807	PTPN23	Q9H3S7	1636 aa		32.12	■■■□□ 2.73
PPM1B-208	ENST00000419807	PTPRK	Q15262	1439 aa		32.1	■■■□□ 2.73
PPM1B-208	ENST00000419807	CDK11A	Q9UQ88	783 aa	Predicted RBP	32.07	■■■□□ 2.73
PPM1B-208	ENST00000419807	MAPKBP1	O60336	1514 aa		32.07	■■■□□ 2.72
PPM1B-208	ENST00000419807	PLB1	Q6P1J6	1458 aa		32.04	■■■□□ 2.72
PPM1B-208	ENST00000419807	TCOF1	Q13428	1488 aa	Known RBP	32.02	■■■□□ 2.72
PPM1B-208	ENST00000419807	HFM1	A2PYH4	1435 aa		32.01	■■■□□ 2.72
PPM1B-208	ENST00000419807	MIA2	Q96PC5	1412 aa		32.01	■■■□□ 2.72
PPM1B-208	ENST00000419807	NAIP	Q13075	1403 aa		31.93	■■■□□ 2.7
PPM1B-208	ENST00000419807	CHD1	O14646	1710 aa		31.9	■■■□□ 2.7
PPM1B-208	ENST00000419807	PRG4	Q92954	1404 aa	Predicted RBP	31.9	■■■□□ 2.7
PPM1B-208	ENST00000419807	TRO	Q12816	1431 aa	Predicted RBP	31.89	■■■□□ 2.7
PPM1B-208	ENST00000419807	CHIC2	Q9UKJ5	165 aa		31.89	■■■□□ 2.7
PPM1B-208	ENST00000419807	SIN3A	Q96ST3	1273 aa		31.85	■■■□□ 2.69
PPM1B-208	ENST00000419807	RRP7BP	Q9NSQ0	103 aa		31.85	■■■□□ 2.69
PPM1B-208	ENST00000419807	NEUROD1	Q13562	356 aa		31.84	■■■□□ 2.69
PPM1B-208	ENST00000419807	ABCA8	O94911	1581 aa		31.84	■■■□□ 2.69
PPM1B-208	ENST00000419807	UACA	Q9BZF9	1416 aa		31.83	■■■□□ 2.69
PPM1B-208	ENST00000419807	PTPRG	P23470	1445 aa		31.79	■■■□□ 2.68
PPM1B-208	ENST00000419807	ZNF644	Q9H582	1327 aa	Predicted RBP	31.77	■■■□□ 2.68
PPM1B-208	ENST00000419807	PLEKHD1	A6NEE1	506 aa		31.77	■■■□□ 2.68
PPM1B-208	ENST00000419807	AKNA	Q7Z591	1439 aa		31.76	■■■□□ 2.67
PPM1B-208	ENST00000419807	ATP10B	O94823	1461 aa		31.75	■■■□□ 2.67
PPM1B-208	ENST00000419807	CFDP1	Q9UEE9	299 aa	Predicted RBP	31.74	■■■□□ 2.67
PPM1B-208	ENST00000419807	TIMELESS	Q9UNS1	1208 aa		31.74	■■■□□ 2.67
PPM1B-208	ENST00000419807	ADCY10	Q96PN6	1610 aa		31.73	■■■□□ 2.67
PPM1B-208	ENST00000419807	DAPK1	P53355	1430 aa		31.73	■■■□□ 2.67
PPM1B-208	ENST00000419807	GCC2	Q8IWJ2	1684 aa		31.73	■■■□□ 2.67
PPM1B-208	ENST00000419807	KIF14	Q15058	1648 aa		31.72	■■■□□ 2.67
PPM1B-208	ENST00000419807	GPATCH8	Q9UKJ3	1502 aa	Known RBP	31.7	■■■□□ 2.66
PPM1B-208	ENST00000419807	ABCC5	O15440	1437 aa		31.69	■■■□□ 2.66
PPM1B-208	ENST00000419807	DNMT1	P26358	1616 aa	Known RBP	31.68	■■■□□ 2.66
PPM1B-208	ENST00000419807	ITSN2	Q9NZM3	1697 aa		31.68	■■■□□ 2.66
PPM1B-208	ENST00000419807	SHROOM2	Q13796	1616 aa		31.67	■■■□□ 2.66

Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms