RNA–Protein interactions for RNA: ENST00000419807.5

PPM1B-208, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 5

Gene PPM1B, Length 2,084 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-208ENST00000419807 NISCHQ9Y2I1 1504 aa47.8■■■■■ 5.24
PPM1B-208ENST00000419807 CCDC180Q9P1Z9 1646 aa41.19■■■■■ 4.18
PPM1B-208ENST00000419807 ZCCHC6Q5VYS8 1495 aaKnown RBP40.27■■■■■ 4.04
PPM1B-208ENST00000419807 SHROOM4Q9ULL8 1493 aa39.8■■■■□ 3.96
PPM1B-208ENST00000419807 DCAF8L2P0C7V8 631 aa39.66■■■■□ 3.94
PPM1B-208ENST00000419807 DCAF1Q9Y4B6 1507 aa39.38■■■■□ 3.89
PPM1B-208ENST00000419807 SUPT5HO00267 1087 aaKnown RBP38.67■■■■□ 3.78
PPM1B-208ENST00000419807 ABCC9O60706 1549 aa38.66■■■■□ 3.78
PPM1B-208ENST00000419807 MYO15BQ96JP2 1530 aa38.63■■■■□ 3.77
PPM1B-208ENST00000419807 NACADO15069 1562 aa38.28■■■■□ 3.72
PPM1B-208ENST00000419807 SCRIBQ14160 1630 aa38.22■■■■□ 3.71
PPM1B-208ENST00000419807 RB1CC1Q8TDY2 1594 aa37.82■■■■□ 3.65
PPM1B-208ENST00000419807 RSF1Q96T23 1441 aaPredicted RBP37.42■■■■□ 3.58
PPM1B-208ENST00000419807 CHIC1Q5VXU3 224 aa37.25■■■■□ 3.55
PPM1B-208ENST00000419807 CECR2Q9BXF3 1484 aa37.21■■■■□ 3.55
PPM1B-208ENST00000419807 UNC13AQ9UPW8 1703 aa37.11■■■■□ 3.53
PPM1B-208ENST00000419807 MROH2BQ7Z745 1585 aa37.03■■■■□ 3.52
PPM1B-208ENST00000419807 BAZ1AQ9NRL2 1556 aaPredicted RBP36.83■■■■□ 3.49
PPM1B-208ENST00000419807 WIZO95785 1651 aa36.77■■■■□ 3.48
PPM1B-208ENST00000419807 PABPN1Q86U42 306 aaKnown RBP eCLIP36.72■■■■□ 3.47
PPM1B-208ENST00000419807 BICRAQ9NZM4 1560 aa36.7■■■■□ 3.47
PPM1B-208ENST00000419807 SMARCA4P51532 1647 aa36.58■■■■□ 3.45
PPM1B-208ENST00000419807 TOP2AP11388 1531 aaKnown RBP36.3■■■■□ 3.4
PPM1B-208ENST00000419807 TRIM41Q8WV44 630 aa36.22■■■■□ 3.39
PPM1B-208ENST00000419807 CCDC88BA6NC98 1476 aa36.05■■■■□ 3.36
PPM1B-208ENST00000419807 PEG3Q9GZU2 1588 aa36.02■■■■□ 3.36
PPM1B-208ENST00000419807 SMARCA2P51531 1590 aa36.02■■■■□ 3.36
PPM1B-208ENST00000419807 LOC105371045A0A1W2PR82 267 aa35.99■■■■□ 3.35
PPM1B-208ENST00000419807 EIF4G1Q04637 1599 aaKnown RBP35.92■■■■□ 3.34
PPM1B-208ENST00000419807 ATAD2BQ9ULI0 1458 aa35.86■■■■□ 3.33
PPM1B-208ENST00000419807 BAZ1BQ9UIG0 1483 aaKnown RBP35.71■■■■□ 3.31
PPM1B-208ENST00000419807 FAM9AQ8IZU1 332 aaPredicted RBP35.71■■■■□ 3.31
PPM1B-208ENST00000419807 ABCC8Q09428 1581 aa35.57■■■■□ 3.28
PPM1B-208ENST00000419807 NCAPD3P42695 1498 aa35.38■■■■□ 3.26
PPM1B-208ENST00000419807 HMGXB3Q12766 1538 aa35.33■■■■□ 3.25
PPM1B-208ENST00000419807 EHMT2Q96KQ7 1210 aa35.29■■■■□ 3.24
PPM1B-208ENST00000419807 WRNQ14191 1432 aaPredicted RBP eCLIP35.21■■■■□ 3.23
PPM1B-208ENST00000419807 PCGF6Q9BYE7 350 aa35.09■■■■□ 3.21
PPM1B-208ENST00000419807 SOGA1O94964 1423 aa35.08■■■■□ 3.21
PPM1B-208ENST00000419807 SYNJ1O43426 1573 aa35.01■■■■□ 3.19
PPM1B-208ENST00000419807 EEA1Q15075 1411 aa34.97■■■■□ 3.19
PPM1B-208ENST00000419807 RUSC2Q8N2Y8 1516 aa34.91■■■■□ 3.18
PPM1B-208ENST00000419807 CC2D2AQ9P2K1 1620 aa34.9■■■■□ 3.18
PPM1B-208ENST00000419807 CSRNP3Q8WYN3 585 aa34.89■■■■□ 3.18
PPM1B-208ENST00000419807 CFTRP13569 1480 aa34.82■■■■□ 3.16
PPM1B-208ENST00000419807 TRIM26Q12899 539 aaPredicted RBP34.78■■■■□ 3.16
PPM1B-208ENST00000419807 TOP2BQ02880 1626 aa34.76■■■■□ 3.15
PPM1B-208ENST00000419807 BIVM-ERCC5R4GMW8 1640 aa34.66■■■■□ 3.14
PPM1B-208ENST00000419807 TNIKQ9UKE5 1360 aa34.63■■■■□ 3.13
PPM1B-208ENST00000419807 UBTFP17480 764 aaKnown RBP34.61■■■■□ 3.13
PPM1B-208ENST00000419807 CADPSQ9ULU8 1353 aa34.6■■■■□ 3.13
PPM1B-208ENST00000419807 GOLGA3Q08378 1498 aa34.59■■■■□ 3.13
PPM1B-208ENST00000419807 CUX1P39880 1505 aa34.55■■■■□ 3.12
PPM1B-208ENST00000419807 CEP162Q5TB80 1403 aa34.54■■■■□ 3.12
PPM1B-208ENST00000419807 PRDM2Q13029 1718 aa34.54■■■■□ 3.12
PPM1B-208ENST00000419807 HRCP23327 699 aa34.52■■■■□ 3.12
PPM1B-208ENST00000419807 CEP164Q9UPV0 1460 aa34.51■■■■□ 3.12
PPM1B-208ENST00000419807 KIF21BO75037 1637 aa34.47■■■■□ 3.11
PPM1B-208ENST00000419807 PPARGC1BQ86YN6 1023 aaKnown RBP34.32■■■■□ 3.09
PPM1B-208ENST00000419807 RAPGEF2Q9Y4G8 1499 aa34.3■■■■□ 3.08
PPM1B-208ENST00000419807 KIF27Q86VH2 1401 aa34.25■■■■□ 3.07
PPM1B-208ENST00000419807 FANCD2Q9BXW9 1451 aa34.23■■■■□ 3.07
PPM1B-208ENST00000419807 NESP48681 1621 aa34.15■■■■□ 3.06
PPM1B-208ENST00000419807 PRXQ9BXM0 1461 aa34.15■■■■□ 3.06
PPM1B-208ENST00000419807 CLIP1P30622 1438 aa34.12■■■■□ 3.05
PPM1B-208ENST00000419807 ERICH3Q5RHP9 1530 aa34.11■■■■□ 3.05
PPM1B-208ENST00000419807 FGD5Q6ZNL6 1462 aa34.09■■■■□ 3.05
PPM1B-208ENST00000419807 DNAJC5BQ9UF47 199 aa34.04■■■■□ 3.04
PPM1B-208ENST00000419807 CUX2O14529 1486 aa34.04■■■■□ 3.04
PPM1B-208ENST00000419807 LAMC3Q9Y6N6 1575 aa34.03■■■■□ 3.04
PPM1B-208ENST00000419807 RANGAP1P46060 587 aaPredicted RBP33.99■■■■□ 3.03
PPM1B-208ENST00000419807 DNMBPQ6XZF7 1577 aa33.96■■■■□ 3.03
PPM1B-208ENST00000419807 TTBK1Q5TCY1 1321 aaPredicted RBP33.94■■■■□ 3.02
PPM1B-208ENST00000419807 IGF1RP08069 1367 aa33.91■■■■□ 3.02
PPM1B-208ENST00000419807 TOPBP1Q92547 1522 aa33.91■■■■□ 3.02
PPM1B-208ENST00000419807 VPS8Q8N3P4 1428 aa33.88■■■■□ 3.01
PPM1B-208ENST00000419807 PDS5BQ9NTI5 1447 aa33.84■■■■□ 3.01
PPM1B-208ENST00000419807 POLA1P09884 1462 aaPredicted RBP33.82■■■■□ 3.01
PPM1B-208ENST00000419807 RAD54L2Q9Y4B4 1467 aa33.79■■■■□ 3
PPM1B-208ENST00000419807 CARMIL1Q5VZK9 1371 aa33.76■■■□□ 2.99
PPM1B-208ENST00000419807 URB2Q14146 1524 aaKnown RBP33.75■■■□□ 2.99
PPM1B-208ENST00000419807 ABCA10Q8WWZ4 1543 aa33.74■■■□□ 2.99
PPM1B-208ENST00000419807 APLP2Q06481 763 aa33.71■■■□□ 2.99
PPM1B-208ENST00000419807 ZEB1P37275 1124 aaPredicted RBP33.68■■■□□ 2.98
PPM1B-208ENST00000419807 ARAP1Q96P48 1450 aa33.65■■■□□ 2.98
PPM1B-208ENST00000419807 KIF21AQ7Z4S6 1674 aa33.64■■■□□ 2.98
PPM1B-208ENST00000419807 ARHGAP35Q9NRY4 1499 aa33.54■■■□□ 2.96
PPM1B-208ENST00000419807 WDR97A6NE52 1622 aa33.48■■■□□ 2.95
PPM1B-208ENST00000419807 TDRD9Q8NDG6 1382 aaKnown RBP33.45■■■□□ 2.94
PPM1B-208ENST00000419807 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.44■■■□□ 2.94
PPM1B-208ENST00000419807 CUL7Q14999 1698 aa33.43■■■□□ 2.94
PPM1B-208ENST00000419807 ABCA5Q8WWZ7 1642 aa33.37■■■□□ 2.93
PPM1B-208ENST00000419807 CCER1Q8TC90 406 aaPredicted RBP33.37■■■□□ 2.93
PPM1B-208ENST00000419807 GAPVD1Q14C86 1478 aa33.37■■■□□ 2.93
PPM1B-208ENST00000419807 MRC2Q9UBG0 1479 aa33.33■■■□□ 2.93
PPM1B-208ENST00000419807 TARBP1Q13395 1621 aaKnown RBP33.3■■■□□ 2.92
PPM1B-208ENST00000419807 KANK4Q5T7N3 995 aaPredicted RBP33.28■■■□□ 2.92
PPM1B-208ENST00000419807 HNRNPUL2Q1KMD3 747 aaKnown RBP33.21■■■□□ 2.91
PPM1B-208ENST00000419807 P3H3Q8IVL6 736 aa33.19■■■□□ 2.9
PPM1B-208ENST00000419807 CTTNBP2Q8WZ74 1663 aa33.18■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 165.6 ms