RNA–Protein interactions for RNA: ENST00000417433.6

POLR1B-204, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 3,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-204ENST00000417433 PRDM2Q13029 1718 aa12.13□□□□□ -0.47
POLR1B-204ENST00000417433 GRIN2BQ13224 1484 aa12.13□□□□□ -0.47
POLR1B-204ENST00000417433 CARMIL2Q6F5E8 1435 aa12.12□□□□□ -0.47
POLR1B-204ENST00000417433 MTUS2Q5JR59 1369 aa12.11□□□□□ -0.47
POLR1B-204ENST00000417433 PLEKHD1A6NEE1 506 aa12.11□□□□□ -0.47
POLR1B-204ENST00000417433 CCER1Q8TC90 406 aaPredicted RBP12.11□□□□□ -0.47
POLR1B-204ENST00000417433 CYB5RLQ6IPT4 315 aa12.08□□□□□ -0.48
POLR1B-204ENST00000417433 FHAD1B1AJZ9 1412 aa12.07□□□□□ -0.48
POLR1B-204ENST00000417433 TRHP20396 242 aaPredicted RBP12.06□□□□□ -0.48
POLR1B-204ENST00000417433 ZEB1P37275 1124 aaPredicted RBP12.06□□□□□ -0.48
POLR1B-204ENST00000417433 ZNF608Q9ULD9 1512 aaPredicted RBP12.06□□□□□ -0.48
POLR1B-204ENST00000417433 KIF21AQ7Z4S6 1674 aa12.05□□□□□ -0.48
POLR1B-204ENST00000417433 SNAPC4Q5SXM2 1469 aa12.05□□□□□ -0.48
POLR1B-204ENST00000417433 PRXQ9BXM0 1461 aa12.04□□□□□ -0.48
POLR1B-204ENST00000417433 ABCA10Q8WWZ4 1543 aa12.03□□□□□ -0.48
POLR1B-204ENST00000417433 ERICH3Q5RHP9 1530 aa12.03□□□□□ -0.48
POLR1B-204ENST00000417433 FHOD3Q2V2M9 1422 aa12□□□□□ -0.49
POLR1B-204ENST00000417433 VPS8Q8N3P4 1428 aa12□□□□□ -0.49
POLR1B-204ENST00000417433 TRIM52Q96A61 297 aa11.99□□□□□ -0.49
POLR1B-204ENST00000417433 PTPRGP23470 1445 aa11.97□□□□□ -0.49
POLR1B-204ENST00000417433 FMN1Q68DA7 1419 aa11.95□□□□□ -0.5
POLR1B-204ENST00000417433 ARAP1Q96P48 1450 aa11.94□□□□□ -0.5
POLR1B-204ENST00000417433 CFDP1Q9UEE9 299 aaPredicted RBP11.94□□□□□ -0.5
POLR1B-204ENST00000417433 CHIC2Q9UKJ5 165 aa11.94□□□□□ -0.5
POLR1B-204ENST00000417433 WDR62O43379 1518 aa11.93□□□□□ -0.5
POLR1B-204ENST00000417433 TSPY4P0CV99 314 aa11.93□□□□□ -0.5
POLR1B-204ENST00000417433 TSPY10P0CW01 314 aa11.93□□□□□ -0.5
POLR1B-204ENST00000417433 SYNJ2O15056 1496 aa11.92□□□□□ -0.5
POLR1B-204ENST00000417433 MAGI1Q96QZ7 1491 aaPredicted RBP11.92□□□□□ -0.5
POLR1B-204ENST00000417433 PRG4Q92954 1404 aaPredicted RBP11.91□□□□□ -0.5
POLR1B-204ENST00000417433 ESF1Q9H501 851 aaKnown RBP11.9□□□□□ -0.5
POLR1B-204ENST00000417433 PLPPR3Q6T4P5 718 aa11.89□□□□□ -0.51
POLR1B-204ENST00000417433 GRIN2AQ12879 1464 aa11.88□□□□□ -0.51
POLR1B-204ENST00000417433 CCNB3Q8WWL7 1395 aa11.86□□□□□ -0.51
POLR1B-204ENST00000417433 ARHGAP35Q9NRY4 1499 aa11.85□□□□□ -0.51
POLR1B-204ENST00000417433 KIAA0586Q9BVV6 1533 aa11.84□□□□□ -0.51
POLR1B-204ENST00000417433 KANK4Q5T7N3 995 aaPredicted RBP11.83□□□□□ -0.52
POLR1B-204ENST00000417433 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.83□□□□□ -0.522e-6■■□□□ 13
POLR1B-204ENST00000417433 EIF4G3O43432 1585 aaKnown RBP11.82□□□□□ -0.52
POLR1B-204ENST00000417433 CUL7Q14999 1698 aa11.82□□□□□ -0.52
POLR1B-204ENST00000417433 ARID4BQ4LE39 1312 aaPredicted RBP11.81□□□□□ -0.52
POLR1B-204ENST00000417433 RRP7BPQ9NSQ0 103 aa11.81□□□□□ -0.52
POLR1B-204ENST00000417433 WDR97A6NE52 1622 aa11.78□□□□□ -0.52
POLR1B-204ENST00000417433 NEUROD1Q13562 356 aa11.78□□□□□ -0.52
POLR1B-204ENST00000417433 EFCAB2Q5VUJ9 269 aa11.78□□□□□ -0.52
POLR1B-204ENST00000417433 IQGAP2Q13576 1575 aa11.78□□□□□ -0.52
POLR1B-204ENST00000417433 THOC2Q8NI27 1593 aaKnown RBP11.78□□□□□ -0.52
POLR1B-204ENST00000417433 FAM69CQ0P6D2 419 aa11.78□□□□□ -0.52
POLR1B-204ENST00000417433 CCDC18Q5T9S5 1454 aa11.74□□□□□ -0.53
POLR1B-204ENST00000417433 ZNF326Q5BKZ1 582 aaKnown RBP11.73□□□□□ -0.53
POLR1B-204ENST00000417433 RRBP1Q9P2E9 1410 aaKnown RBP11.73□□□□□ -0.53
POLR1B-204ENST00000417433 CHGAP10645 457 aaKnown RBP11.73□□□□□ -0.53
POLR1B-204ENST00000417433 TARBP1Q13395 1621 aaKnown RBP11.72□□□□□ -0.53
POLR1B-204ENST00000417433 STAG3Q9UJ98 1225 aa11.72□□□□□ -0.53
POLR1B-204ENST00000417433 ADAMTS12P58397 1594 aa11.71□□□□□ -0.53
POLR1B-204ENST00000417433 BCANQ96GW7 911 aa11.71□□□□□ -0.53
POLR1B-204ENST00000417433 TIAM1Q13009 1591 aa11.71□□□□□ -0.54
POLR1B-204ENST00000417433 MLECQ14165 292 aa11.71□□□□□ -0.54
POLR1B-204ENST00000417433 EFCAB5A4FU69 1503 aa11.7□□□□□ -0.54
POLR1B-204ENST00000417433 CTTNBP2Q8WZ74 1663 aa11.7□□□□□ -0.54
POLR1B-204ENST00000417433 ABCA5Q8WWZ7 1642 aa11.69□□□□□ -0.54
POLR1B-204ENST00000417433 CFAP43Q8NDM7 1665 aa11.69□□□□□ -0.54
POLR1B-204ENST00000417433 MAP3K1Q13233 1512 aa11.69□□□□□ -0.54
POLR1B-204ENST00000417433 HNRNPMP52272 730 aaKnown RBP eCLIP11.69□□□□□ -0.54
POLR1B-204ENST00000417433 POLR3GLQ9BT43 218 aa11.69□□□□□ -0.54
POLR1B-204ENST00000417433 UACAQ9BZF9 1416 aa11.68□□□□□ -0.54
POLR1B-204ENST00000417433 PCF11O94913 1555 aaKnown RBP11.68□□□□□ -0.54
POLR1B-204ENST00000417433 CASKIN1Q8WXD9 1431 aa11.67□□□□□ -0.54
POLR1B-204ENST00000417433 PLB1Q6P1J6 1458 aa11.67□□□□□ -0.54
POLR1B-204ENST00000417433 PBRM1Q86U86 1689 aa11.67□□□□□ -0.54
POLR1B-204ENST00000417433 SLC4A1APQ9BWU0 796 aaKnown RBP11.66□□□□□ -0.54
POLR1B-204ENST00000417433 GGT6Q6P531 493 aa11.64□□□□□ -0.55
POLR1B-204ENST00000417433 DHX57Q6P158 1386 aaKnown RBP11.63□□□□□ -0.55
POLR1B-204ENST00000417433 SPAG9O60271 1321 aaKnown RBP11.63□□□□□ -0.55
POLR1B-204ENST00000417433 LRRC9Q6ZRR7 1453 aa11.63□□□□□ -0.55
POLR1B-204ENST00000417433 NUP160Q12769 1436 aa11.63□□□□□ -0.55
POLR1B-204ENST00000417433 LRRIQ1Q96JM4 1722 aa11.62□□□□□ -0.55
POLR1B-204ENST00000417433 FYCO1Q9BQS8 1478 aa11.62□□□□□ -0.55
POLR1B-204ENST00000417433 DIEXFQ68CQ4 756 aaKnown RBP11.61□□□□□ -0.55
POLR1B-204ENST00000417433 SAMD9Q5K651 1589 aa11.6□□□□□ -0.55
POLR1B-204ENST00000417433 ZNF644Q9H582 1327 aaPredicted RBP11.59□□□□□ -0.55
POLR1B-204ENST00000417433 RSPH4AQ5TD94 716 aa11.59□□□□□ -0.55
POLR1B-204ENST00000417433 CDK13Q14004 1512 aaKnown RBP11.59□□□□□ -0.55
POLR1B-204ENST00000417433 PHLDB1Q86UU1 1377 aa11.58□□□□□ -0.55
POLR1B-204ENST00000417433 SENP3Q9H4L4 574 aaPredicted RBP11.58□□□□□ -0.56
POLR1B-204ENST00000417433 KIF3BO15066 747 aa11.58□□□□□ -0.56
POLR1B-204ENST00000417433 HECW1Q76N89 1606 aa11.57□□□□□ -0.56
POLR1B-204ENST00000417433 ZNF316A6NFI3 1004 aaPredicted RBP11.57□□□□□ -0.56
POLR1B-204ENST00000417433 TROQ12816 1431 aaPredicted RBP11.57□□□□□ -0.56
POLR1B-204ENST00000417433 EPRSP07814 1512 aaKnown RBP11.57□□□□□ -0.56
POLR1B-204ENST00000417433 ANKRD30AQ9BXX3 1397 aa11.56□□□□□ -0.56
POLR1B-204ENST00000417433 SCAF1Q9H7N4 1312 aaKnown RBP11.55□□□□□ -0.56
POLR1B-204ENST00000417433 CEP170Q5SW79 1584 aa11.55□□□□□ -0.56
POLR1B-204ENST00000417433 TONSLQ96HA7 1378 aa11.55□□□□□ -0.56
POLR1B-204ENST00000417433 CLSPNQ9HAW4 1339 aa11.55□□□□□ -0.56
POLR1B-204ENST00000417433 CNGB1Q14028 1251 aaPredicted RBP11.55□□□□□ -0.56
POLR1B-204ENST00000417433 AFAP1Q8N556 730 aa11.54□□□□□ -0.56
POLR1B-204ENST00000417433 NCOA2Q15596 1464 aa11.54□□□□□ -0.56
POLR1B-204ENST00000417433 KANK1Q14678 1352 aa11.54□□□□□ -0.56
POLR1B-204ENST00000417433 MAPKBP1O60336 1514 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms