RNA–Protein interactions for RNA: ENST00000417157.2

SLC13A3-205, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-205ENST00000417157 RAPGEF2Q9Y4G8 1499 aa23.96■■□□□ 1.43
SLC13A3-205ENST00000417157 JPH4Q96JJ6 628 aa23.96■■□□□ 1.43
SLC13A3-205ENST00000417157 PRG4Q92954 1404 aaPredicted RBP23.95■■□□□ 1.42
SLC13A3-205ENST00000417157 ERCC6L2Q5T890 1561 aa23.93■■□□□ 1.42
SLC13A3-205ENST00000417157 EEA1Q15075 1411 aa23.85■■□□□ 1.41
SLC13A3-205ENST00000417157 IQGAP2Q13576 1575 aa23.85■■□□□ 1.41
SLC13A3-205ENST00000417157 PRXQ9BXM0 1461 aa23.81■■□□□ 1.4
SLC13A3-205ENST00000417157 CARMIL2Q6F5E8 1435 aa23.79■■□□□ 1.4
SLC13A3-205ENST00000417157 CSRNP3Q8WYN3 585 aa23.76■■□□□ 1.39
SLC13A3-205ENST00000417157 CHIC1Q5VXU3 224 aa23.74■■□□□ 1.39
SLC13A3-205ENST00000417157 CTTNBP2Q8WZ74 1663 aa23.71■■□□□ 1.39
SLC13A3-205ENST00000417157 UGGT2Q9NYU1 1516 aa23.7■■□□□ 1.38
SLC13A3-205ENST00000417157 TRHP20396 242 aaPredicted RBP23.69■■□□□ 1.38
SLC13A3-205ENST00000417157 TNIKQ9UKE5 1360 aa23.68■■□□□ 1.38
SLC13A3-205ENST00000417157 PTPRGP23470 1445 aa23.67■■□□□ 1.38
SLC13A3-205ENST00000417157 DISP1Q96F81 1524 aa23.64■■□□□ 1.38
SLC13A3-205ENST00000417157 GOLGA3Q08378 1498 aa23.62■■□□□ 1.37
SLC13A3-205ENST00000417157 KIAA0556O60303 1618 aa23.62■■□□□ 1.37
SLC13A3-205ENST00000417157 NPM1P06748 294 aaKnown RBP eCLIP23.61■■□□□ 1.37
SLC13A3-205ENST00000417157 FAM9AQ8IZU1 332 aaPredicted RBP23.59■■□□□ 1.37
SLC13A3-205ENST00000417157 ADCY10Q96PN6 1610 aa23.58■■□□□ 1.36
SLC13A3-205ENST00000417157 KIF21BO75037 1637 aa23.56■■□□□ 1.36
SLC13A3-205ENST00000417157 TTBK1Q5TCY1 1321 aaPredicted RBP23.55■■□□□ 1.36
SLC13A3-205ENST00000417157 MAPKBP1O60336 1514 aa23.52■■□□□ 1.36
SLC13A3-205ENST00000417157 UACAQ9BZF9 1416 aa23.51■■□□□ 1.35
SLC13A3-205ENST00000417157 UHRF1BP1LA0JNW5 1464 aa23.51■■□□□ 1.35
SLC13A3-205ENST00000417157 ABCC2Q92887 1545 aa23.49■■□□□ 1.35
SLC13A3-205ENST00000417157 SAMD9Q5K651 1589 aa23.41■■□□□ 1.34
SLC13A3-205ENST00000417157 ABCC10Q5T3U5 1492 aa23.41■■□□□ 1.34
SLC13A3-205ENST00000417157 KDM5BQ9UGL1 1544 aa23.38■■□□□ 1.33
SLC13A3-205ENST00000417157 PLB1Q6P1J6 1458 aa23.36■■□□□ 1.33
SLC13A3-205ENST00000417157 DIP2BQ9P265 1576 aa23.35■■□□□ 1.33
SLC13A3-205ENST00000417157 EFCAB5A4FU69 1503 aa23.34■■□□□ 1.33
SLC13A3-205ENST00000417157 UBTFP17480 764 aaKnown RBP23.34■■□□□ 1.33
SLC13A3-205ENST00000417157 ABCA8O94911 1581 aa23.34■■□□□ 1.33
SLC13A3-205ENST00000417157 KIF13AQ9H1H9 1805 aa23.33■■□□□ 1.33
SLC13A3-205ENST00000417157 FAM69CQ0P6D2 419 aa23.33■■□□□ 1.33
SLC13A3-205ENST00000417157 ASXL2Q76L83 1435 aa23.33■■□□□ 1.32
SLC13A3-205ENST00000417157 P3H3Q8IVL6 736 aa23.31■■□□□ 1.32
SLC13A3-205ENST00000417157 ZCCHC11Q5TAX3 1644 aaKnown RBP23.3■■□□□ 1.32
SLC13A3-205ENST00000417157 RANGAP1P46060 587 aaPredicted RBP23.28■■□□□ 1.32
SLC13A3-205ENST00000417157 EHMT2Q96KQ7 1210 aa23.26■■□□□ 1.31
SLC13A3-205ENST00000417157 FHOD3Q2V2M9 1422 aa23.25■■□□□ 1.31
SLC13A3-205ENST00000417157 WDR7Q9Y4E6 1490 aa23.22■■□□□ 1.31
SLC13A3-205ENST00000417157 GLI2P10070 1586 aa23.22■■□□□ 1.31
SLC13A3-205ENST00000417157 RAPGEF6Q8TEU7 1601 aa23.21■■□□□ 1.31
SLC13A3-205ENST00000417157 EPRSP07814 1512 aaKnown RBP23.18■■□□□ 1.3
SLC13A3-205ENST00000417157 FMN1Q68DA7 1419 aa23.13■■□□□ 1.29
SLC13A3-205ENST00000417157 ATP10BO94823 1461 aa23.12■■□□□ 1.29
SLC13A3-205ENST00000417157 ARHGAP35Q9NRY4 1499 aa23.12■■□□□ 1.29
SLC13A3-205ENST00000417157 NUP153P49790 1475 aaKnown RBP23.11■■□□□ 1.29
SLC13A3-205ENST00000417157 ARID3CA6NKF2 412 aa23.09■■□□□ 1.29
SLC13A3-205ENST00000417157 MAP3K4Q9Y6R4 1608 aa23.08■■□□□ 1.29
SLC13A3-205ENST00000417157 TEX14Q8IWB6 1497 aa23.07■■□□□ 1.28
SLC13A3-205ENST00000417157 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.07■■□□□ 1.28
SLC13A3-205ENST00000417157 HNRNPUL2Q1KMD3 747 aaKnown RBP23.07■■□□□ 1.28
SLC13A3-205ENST00000417157 TSPOAP1O95153 1857 aa23.06■■□□□ 1.28
SLC13A3-205ENST00000417157 KCNH8Q96L42 1107 aa23.03■■□□□ 1.28
SLC13A3-205ENST00000417157 KDM6BO15054 1643 aa23.03■■□□□ 1.28
SLC13A3-205ENST00000417157 CFAP43Q8NDM7 1665 aa23.03■■□□□ 1.28
SLC13A3-205ENST00000417157 HECW1Q76N89 1606 aa23.02■■□□□ 1.28
SLC13A3-205ENST00000417157 PPRC1Q5VV67 1664 aaKnown RBP23.01■■□□□ 1.27
SLC13A3-205ENST00000417157 CD109Q6YHK3 1445 aa22.99■■□□□ 1.27
SLC13A3-205ENST00000417157 CLIP1P30622 1438 aa22.99■■□□□ 1.27
SLC13A3-205ENST00000417157 MAGI3Q5TCQ9 1506 aa22.98■■□□□ 1.27
SLC13A3-205ENST00000417157 PLEKHD1A6NEE1 506 aa22.97■■□□□ 1.27
SLC13A3-205ENST00000417157 ABCA9Q8IUA7 1624 aa22.93■■□□□ 1.26
SLC13A3-205ENST00000417157 ATP1B4Q9UN42 357 aaPredicted RBP22.93■■□□□ 1.26
SLC13A3-205ENST00000417157 CDK13Q14004 1512 aaKnown RBP22.92■■□□□ 1.26
SLC13A3-205ENST00000417157 CDK11AQ9UQ88 783 aaPredicted RBP22.91■■□□□ 1.26
SLC13A3-205ENST00000417157 CASKIN1Q8WXD9 1431 aa22.9■■□□□ 1.26
SLC13A3-205ENST00000417157 CCDC18Q5T9S5 1454 aa22.87■■□□□ 1.25
SLC13A3-205ENST00000417157 PCF11O94913 1555 aaKnown RBP22.86■■□□□ 1.25
SLC13A3-205ENST00000417157 FYCO1Q9BQS8 1478 aa22.85■■□□□ 1.25
SLC13A3-205ENST00000417157 PHLDB1Q86UU1 1377 aa22.85■■□□□ 1.25
SLC13A3-205ENST00000417157 CEP162Q5TB80 1403 aa22.84■■□□□ 1.25
SLC13A3-205ENST00000417157 NEO1Q92859 1461 aa22.81■■□□□ 1.24
SLC13A3-205ENST00000417157 COL17A1Q9UMD9 1497 aaPredicted RBP22.79■■□□□ 1.24
SLC13A3-205ENST00000417157 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.79■■□□□ 1.24
SLC13A3-205ENST00000417157 TROQ12816 1431 aaPredicted RBP22.78■■□□□ 1.24
SLC13A3-205ENST00000417157 ARAP3Q8WWN8 1544 aa22.77■■□□□ 1.24
SLC13A3-205ENST00000417157 KIF14Q15058 1648 aa22.77■■□□□ 1.24
SLC13A3-205ENST00000417157 TTC37Q6PGP7 1564 aa22.76■■□□□ 1.23
SLC13A3-205ENST00000417157 CFAP74Q9C0B2 1584 aa22.75■■□□□ 1.23
SLC13A3-205ENST00000417157 LRRIQ1Q96JM4 1722 aa22.74■■□□□ 1.23
SLC13A3-205ENST00000417157 FANCAO15360 1455 aa22.72■■□□□ 1.23
SLC13A3-205ENST00000417157 LOC105371045A0A1W2PR82 267 aa22.7■■□□□ 1.22
SLC13A3-205ENST00000417157 PLCH2O75038 1416 aa22.69■■□□□ 1.22
SLC13A3-205ENST00000417157 AKNAQ7Z591 1439 aa22.66■■□□□ 1.22
SLC13A3-205ENST00000417157 MYO5CQ9NQX4 1742 aa22.65■■□□□ 1.22
SLC13A3-205ENST00000417157 DENND4BO75064 1496 aaPredicted RBP22.63■■□□□ 1.21
SLC13A3-205ENST00000417157 AEBP2Q6ZN18 517 aaPredicted RBP22.62■■□□□ 1.21
SLC13A3-205ENST00000417157 EFCAB2Q5VUJ9 269 aa22.61■■□□□ 1.21
SLC13A3-205ENST00000417157 VPS8Q8N3P4 1428 aa22.6■■□□□ 1.21
SLC13A3-205ENST00000417157 ADGRL1O94910 1474 aa22.6■■□□□ 1.21
SLC13A3-205ENST00000417157 ARHGAP5Q13017 1502 aa22.59■■□□□ 1.21
SLC13A3-205ENST00000417157 MTUS2Q5JR59 1369 aa22.59■■□□□ 1.21
SLC13A3-205ENST00000417157 RAPGEF3O95398 923 aa22.58■■□□□ 1.21
SLC13A3-205ENST00000417157 FRMPD1Q5SYB0 1578 aa22.57■■□□□ 1.2
SLC13A3-205ENST00000417157 EHBP1L1Q8N3D4 1523 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms