RNA–Protein interactions for RNA: ENST00000416321.5

DEPDC4-203, Transcript of DEP domain containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DEPDC4, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-203ENST00000416321 ADAMTS12P58397 1594 aa16.24■□□□□ 0.19
DEPDC4-203ENST00000416321 FHAD1B1AJZ9 1412 aa16.23■□□□□ 0.19
DEPDC4-203ENST00000416321 SNAPC4Q5SXM2 1469 aa16.22■□□□□ 0.19
DEPDC4-203ENST00000416321 MAGI1Q96QZ7 1491 aaPredicted RBP16.21■□□□□ 0.19
DEPDC4-203ENST00000416321 CEP162Q5TB80 1403 aa16.2■□□□□ 0.18
DEPDC4-203ENST00000416321 CTTNBP2Q8WZ74 1663 aa16.14■□□□□ 0.18
DEPDC4-203ENST00000416321 CLIP1P30622 1438 aa16.14■□□□□ 0.17
DEPDC4-203ENST00000416321 RANGAP1P46060 587 aaPredicted RBP16.14■□□□□ 0.17
DEPDC4-203ENST00000416321 CHMP7Q8WUX9 453 aaPredicted RBP16.13■□□□□ 0.17
DEPDC4-203ENST00000416321 SYNJ2O15056 1496 aa16.13■□□□□ 0.17
DEPDC4-203ENST00000416321 GRIN2AQ12879 1464 aa16.11■□□□□ 0.17
DEPDC4-203ENST00000416321 FBLN2P98095 1184 aa16.11■□□□□ 0.17
DEPDC4-203ENST00000416321 IQGAP2Q13576 1575 aa16.03■□□□□ 0.16
DEPDC4-203ENST00000416321 EFCAB5A4FU69 1503 aa16.02■□□□□ 0.15
DEPDC4-203ENST00000416321 CHD1O14646 1710 aa16.01■□□□□ 0.15
DEPDC4-203ENST00000416321 KIAA0586Q9BVV6 1533 aa16■□□□□ 0.15
DEPDC4-203ENST00000416321 ARHGAP35Q9NRY4 1499 aa15.99■□□□□ 0.15
DEPDC4-203ENST00000416321 NUP160Q12769 1436 aa15.98■□□□□ 0.15
DEPDC4-203ENST00000416321 CEP170Q5SW79 1584 aa15.98■□□□□ 0.15
DEPDC4-203ENST00000416321 VPS8Q8N3P4 1428 aa15.96■□□□□ 0.15
DEPDC4-203ENST00000416321 ARAP1Q96P48 1450 aa15.96■□□□□ 0.14
DEPDC4-203ENST00000416321 SAMD9Q5K651 1589 aa15.93■□□□□ 0.14
DEPDC4-203ENST00000416321 P3H3Q8IVL6 736 aa15.92■□□□□ 0.14
DEPDC4-203ENST00000416321 UGGT2Q9NYU1 1516 aa15.92■□□□□ 0.14
DEPDC4-203ENST00000416321 APLP2Q06481 763 aa15.91■□□□□ 0.14
DEPDC4-203ENST00000416321 FHOD3Q2V2M9 1422 aa15.9■□□□□ 0.14
DEPDC4-203ENST00000416321 FMN1Q68DA7 1419 aa15.87■□□□□ 0.13
DEPDC4-203ENST00000416321 CARMIL2Q6F5E8 1435 aa15.86■□□□□ 0.13
DEPDC4-203ENST00000416321 JPH4Q96JJ6 628 aa15.86■□□□□ 0.13
DEPDC4-203ENST00000416321 KIAA0556O60303 1618 aa15.85■□□□□ 0.13
DEPDC4-203ENST00000416321 DISP1Q96F81 1524 aa15.82■□□□□ 0.12
DEPDC4-203ENST00000416321 PCF11O94913 1555 aaKnown RBP15.8■□□□□ 0.12
DEPDC4-203ENST00000416321 CLASP1Q7Z460 1538 aa15.8■□□□□ 0.12
DEPDC4-203ENST00000416321 ATP1B4Q9UN42 357 aaPredicted RBP15.8■□□□□ 0.12
DEPDC4-203ENST00000416321 FYCO1Q9BQS8 1478 aa15.79■□□□□ 0.12
DEPDC4-203ENST00000416321 CASKIN1Q8WXD9 1431 aa15.78■□□□□ 0.12
DEPDC4-203ENST00000416321 PRG4Q92954 1404 aaPredicted RBP15.78■□□□□ 0.12
DEPDC4-203ENST00000416321 SHROOM2Q13796 1616 aa15.78■□□□□ 0.12
DEPDC4-203ENST00000416321 TTBK1Q5TCY1 1321 aaPredicted RBP15.77■□□□□ 0.12
DEPDC4-203ENST00000416321 OSCARQ8IYS5 282 aa15.77■□□□□ 0.12
DEPDC4-203ENST00000416321 PPARGC1BQ86YN6 1023 aaKnown RBP15.76■□□□□ 0.11
DEPDC4-203ENST00000416321 HECW1Q76N89 1606 aa15.73■□□□□ 0.11
DEPDC4-203ENST00000416321 MAP3K1Q13233 1512 aa15.72■□□□□ 0.11
DEPDC4-203ENST00000416321 TIAM1Q13009 1591 aa15.7■□□□□ 0.1
DEPDC4-203ENST00000416321 CFAP43Q8NDM7 1665 aa15.7■□□□□ 0.1
DEPDC4-203ENST00000416321 RAPGEF6Q8TEU7 1601 aa15.69■□□□□ 0.1
DEPDC4-203ENST00000416321 CCDC18Q5T9S5 1454 aa15.69■□□□□ 0.1
DEPDC4-203ENST00000416321 PTPRGP23470 1445 aa15.68■□□□□ 0.1
DEPDC4-203ENST00000416321 TRIM26Q12899 539 aaPredicted RBP15.67■□□□□ 0.1
DEPDC4-203ENST00000416321 ERCC6L2Q5T890 1561 aa15.64■□□□□ 0.09
DEPDC4-203ENST00000416321 PLB1Q6P1J6 1458 aa15.63■□□□□ 0.09
DEPDC4-203ENST00000416321 EPRSP07814 1512 aaKnown RBP15.63■□□□□ 0.09
DEPDC4-203ENST00000416321 KANK4Q5T7N3 995 aaPredicted RBP15.62■□□□□ 0.09
DEPDC4-203ENST00000416321 LRRC9Q6ZRR7 1453 aa15.62■□□□□ 0.09
DEPDC4-203ENST00000416321 SCAF1Q9H7N4 1312 aaKnown RBP15.62■□□□□ 0.09
DEPDC4-203ENST00000416321 ABCA8O94911 1581 aa15.62■□□□□ 0.09
DEPDC4-203ENST00000416321 LRRIQ1Q96JM4 1722 aa15.61■□□□□ 0.09
DEPDC4-203ENST00000416321 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.61■□□□□ 0.09
DEPDC4-203ENST00000416321 HNRNPUL2Q1KMD3 747 aaKnown RBP15.61■□□□□ 0.09
DEPDC4-203ENST00000416321 MTUS2Q5JR59 1369 aa15.61■□□□□ 0.09
DEPDC4-203ENST00000416321 NUP153P49790 1475 aaKnown RBP15.6■□□□□ 0.09
DEPDC4-203ENST00000416321 ARID3CA6NKF2 412 aa15.6■□□□□ 0.09
DEPDC4-203ENST00000416321 PCGF6Q9BYE7 350 aa15.59■□□□□ 0.09
DEPDC4-203ENST00000416321 CDK11AQ9UQ88 783 aaPredicted RBP15.59■□□□□ 0.09
DEPDC4-203ENST00000416321 EHBP1L1Q8N3D4 1523 aa15.58■□□□□ 0.09
DEPDC4-203ENST00000416321 UACAQ9BZF9 1416 aa15.58■□□□□ 0.08
DEPDC4-203ENST00000416321 CDK13Q14004 1512 aaKnown RBP15.58■□□□□ 0.08
DEPDC4-203ENST00000416321 PPP4R3CPQ6ZMV5 832 aa15.57■□□□□ 0.08
DEPDC4-203ENST00000416321 ABCC2Q92887 1545 aa15.54■□□□□ 0.08
DEPDC4-203ENST00000416321 MAPK8IP2Q13387 824 aaPredicted RBP15.54■□□□□ 0.08
DEPDC4-203ENST00000416321 SUPT6HQ7KZ85 1726 aaKnown RBP15.53■□□□□ 0.08
DEPDC4-203ENST00000416321 UHRF1BP1LA0JNW5 1464 aa15.51■□□□□ 0.07
DEPDC4-203ENST00000416321 ATP10BO94823 1461 aa15.49■□□□□ 0.07
DEPDC4-203ENST00000416321 PLEKHD1A6NEE1 506 aa15.49■□□□□ 0.07
DEPDC4-203ENST00000416321 ARHGEF11O15085 1522 aa15.48■□□□□ 0.07
DEPDC4-203ENST00000416321 MAGI3Q5TCQ9 1506 aa15.48■□□□□ 0.07
DEPDC4-203ENST00000416321 NCOA2Q15596 1464 aa15.47■□□□□ 0.07
DEPDC4-203ENST00000416321 TROQ12816 1431 aaPredicted RBP15.47■□□□□ 0.07
DEPDC4-203ENST00000416321 PHLDB1Q86UU1 1377 aa15.44■□□□□ 0.06
DEPDC4-203ENST00000416321 RRBP1Q9P2E9 1410 aaKnown RBP15.43■□□□□ 0.06
DEPDC4-203ENST00000416321 ZCCHC11Q5TAX3 1644 aaKnown RBP15.43■□□□□ 0.06
DEPDC4-203ENST00000416321 ADCY10Q96PN6 1610 aa15.43■□□□□ 0.06
DEPDC4-203ENST00000416321 CCNB3Q8WWL7 1395 aa15.43■□□□□ 0.06
DEPDC4-203ENST00000416321 KIF14Q15058 1648 aa15.43■□□□□ 0.06
DEPDC4-203ENST00000416321 KDM5BQ9UGL1 1544 aa15.43■□□□□ 0.06
DEPDC4-203ENST00000416321 NPM1P06748 294 aaKnown RBP eCLIP15.42■□□□□ 0.06
DEPDC4-203ENST00000416321 RIMBP3CA6NJZ7 1639 aa15.42■□□□□ 0.06
DEPDC4-203ENST00000416321 RIMBP3BA6NNM3 1639 aa15.42■□□□□ 0.06
DEPDC4-203ENST00000416321 RIMBP3Q9UFD9 1639 aa15.42■□□□□ 0.06
DEPDC4-203ENST00000416321 MYOM3Q5VTT5 1437 aa15.41■□□□□ 0.06
DEPDC4-203ENST00000416321 FGD6Q6ZV73 1430 aa15.39■□□□□ 0.05
DEPDC4-203ENST00000416321 FAM50AQ14320 339 aaKnown RBP15.38■□□□□ 0.05
DEPDC4-203ENST00000416321 DMRT2Q9Y5R5 561 aa15.37■□□□□ 0.05
DEPDC4-203ENST00000416321 ITSN2Q9NZM3 1697 aa15.37■□□□□ 0.05
DEPDC4-203ENST00000416321 CYB5RLQ6IPT4 315 aa15.35■□□□□ 0.05
DEPDC4-203ENST00000416321 MIA2Q96PC5 1412 aa15.34■□□□□ 0.05
DEPDC4-203ENST00000416321 PTPN23Q9H3S7 1636 aa15.33■□□□□ 0.04
DEPDC4-203ENST00000416321 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.33■□□□□ 0.04
DEPDC4-203ENST00000416321 ITGAEP38570 1179 aa15.32■□□□□ 0.04
DEPDC4-203ENST00000416321 WDR7Q9Y4E6 1490 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms