RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 SUPT5HO00267 1087 aaKnown RBP17.29■□□□□ 0.36
RFFL-203ENST00000413582 MAPKBP1O60336 1514 aa17.29■□□□□ 0.36
RFFL-203ENST00000413582 ABCC10Q5T3U5 1492 aa17.28■□□□□ 0.36
RFFL-203ENST00000413582 JPH4Q96JJ6 628 aa17.27■□□□□ 0.36
RFFL-203ENST00000413582 DIP2BQ9P265 1576 aa17.27■□□□□ 0.35
RFFL-203ENST00000413582 ADCY10Q96PN6 1610 aa17.26■□□□□ 0.35
RFFL-203ENST00000413582 FAM69CQ0P6D2 419 aa17.21■□□□□ 0.35
RFFL-203ENST00000413582 KDM6BO15054 1643 aa17.18■□□□□ 0.34
RFFL-203ENST00000413582 KIAA0586Q9BVV6 1533 aa17.16■□□□□ 0.34
RFFL-203ENST00000413582 NPM1P06748 294 aaKnown RBP eCLIP17.15■□□□□ 0.34
RFFL-203ENST00000413582 TSPOAP1O95153 1857 aa17.14■□□□□ 0.33
RFFL-203ENST00000413582 CUL7Q14999 1698 aa17.13■□□□□ 0.33
RFFL-203ENST00000413582 KDM4FA0A1W2PPD8 638 aa17.09■□□□□ 0.33
RFFL-203ENST00000413582 IGF1RP08069 1367 aa17.08■□□□□ 0.32
RFFL-203ENST00000413582 KIF27Q86VH2 1401 aa17.05■□□□□ 0.32
RFFL-203ENST00000413582 PPRC1Q5VV67 1664 aaKnown RBP17.04■□□□□ 0.32
RFFL-203ENST00000413582 PTPRGP23470 1445 aa17.03■□□□□ 0.32
RFFL-203ENST00000413582 ABCC2Q92887 1545 aa17.02■□□□□ 0.32
RFFL-203ENST00000413582 GLI2P10070 1586 aa16.99■□□□□ 0.31
RFFL-203ENST00000413582 ASXL2Q76L83 1435 aa16.98■□□□□ 0.31
RFFL-203ENST00000413582 TNIKQ9UKE5 1360 aa16.98■□□□□ 0.31
RFFL-203ENST00000413582 IQGAP2Q13576 1575 aa16.98■□□□□ 0.31
RFFL-203ENST00000413582 PLB1Q6P1J6 1458 aa16.97■□□□□ 0.31
RFFL-203ENST00000413582 CARMIL2Q6F5E8 1435 aa16.96■□□□□ 0.31
RFFL-203ENST00000413582 UHRF1BP1LA0JNW5 1464 aa16.96■□□□□ 0.31
RFFL-203ENST00000413582 CARMIL1Q5VZK9 1371 aa16.95■□□□□ 0.3
RFFL-203ENST00000413582 ADGRL1O94910 1474 aa16.93■□□□□ 0.3
RFFL-203ENST00000413582 TTBK1Q5TCY1 1321 aaPredicted RBP16.93■□□□□ 0.3
RFFL-203ENST00000413582 MAP3K4Q9Y6R4 1608 aa16.92■□□□□ 0.3
RFFL-203ENST00000413582 DISP1Q96F81 1524 aa16.91■□□□□ 0.3
RFFL-203ENST00000413582 UACAQ9BZF9 1416 aa16.9■□□□□ 0.3
RFFL-203ENST00000413582 COL17A1Q9UMD9 1497 aaPredicted RBP16.89■□□□□ 0.29
RFFL-203ENST00000413582 EPRSP07814 1512 aaKnown RBP16.89■□□□□ 0.29
RFFL-203ENST00000413582 KDM5BQ9UGL1 1544 aa16.89■□□□□ 0.29
RFFL-203ENST00000413582 ILDR1Q86SU0 546 aaPredicted RBP16.87■□□□□ 0.29
RFFL-203ENST00000413582 ZCCHC11Q5TAX3 1644 aaKnown RBP16.86■□□□□ 0.29
RFFL-203ENST00000413582 UGGT2Q9NYU1 1516 aa16.86■□□□□ 0.29
RFFL-203ENST00000413582 TEX14Q8IWB6 1497 aa16.84■□□□□ 0.29
RFFL-203ENST00000413582 KIAA0556O60303 1618 aa16.84■□□□□ 0.29
RFFL-203ENST00000413582 HECW2Q9P2P5 1572 aa16.82■□□□□ 0.28
RFFL-203ENST00000413582 RAPGEF2Q9Y4G8 1499 aa16.79■□□□□ 0.28
RFFL-203ENST00000413582 WDR7Q9Y4E6 1490 aa16.78■□□□□ 0.28
RFFL-203ENST00000413582 CFAP43Q8NDM7 1665 aa16.72■□□□□ 0.27
RFFL-203ENST00000413582 CTTNBP2Q8WZ74 1663 aa16.72■□□□□ 0.27
RFFL-203ENST00000413582 MAGI3Q5TCQ9 1506 aa16.71■□□□□ 0.27
RFFL-203ENST00000413582 ABCA8O94911 1581 aa16.7■□□□□ 0.26
RFFL-203ENST00000413582 CD109Q6YHK3 1445 aa16.67■□□□□ 0.26
RFFL-203ENST00000413582 KIF21BO75037 1637 aa16.66■□□□□ 0.26
RFFL-203ENST00000413582 GOLGA3Q08378 1498 aa16.65■□□□□ 0.26
RFFL-203ENST00000413582 ARAP3Q8WWN8 1544 aa16.59■□□□□ 0.25
RFFL-203ENST00000413582 KCNH8Q96L42 1107 aa16.58■□□□□ 0.24
RFFL-203ENST00000413582 PRXQ9BXM0 1461 aa16.56■□□□□ 0.24
RFFL-203ENST00000413582 ADAMTSL3P82987 1691 aa16.54■□□□□ 0.24
RFFL-203ENST00000413582 ABCA9Q8IUA7 1624 aa16.54■□□□□ 0.24
RFFL-203ENST00000413582 ATP10BO94823 1461 aa16.51■□□□□ 0.23
RFFL-203ENST00000413582 PTPRMP28827 1452 aa16.5■□□□□ 0.23
RFFL-203ENST00000413582 FRMPD1Q5SYB0 1578 aa16.49■□□□□ 0.23
RFFL-203ENST00000413582 ARID3CA6NKF2 412 aa16.47■□□□□ 0.23
RFFL-203ENST00000413582 PHLDB1Q86UU1 1377 aa16.47■□□□□ 0.23
RFFL-203ENST00000413582 BCORL1Q5H9F3 1711 aa16.47■□□□□ 0.23
RFFL-203ENST00000413582 SAMD9Q5K651 1589 aa16.47■□□□□ 0.23
RFFL-203ENST00000413582 FBXO41Q8TF61 875 aa16.46■□□□□ 0.23
RFFL-203ENST00000413582 NEO1Q92859 1461 aa16.46■□□□□ 0.23
RFFL-203ENST00000413582 RAPGEF6Q8TEU7 1601 aa16.45■□□□□ 0.22
RFFL-203ENST00000413582 MADDQ8WXG6 1647 aa16.45■□□□□ 0.22
RFFL-203ENST00000413582 PCF11O94913 1555 aaKnown RBP16.43■□□□□ 0.22
RFFL-203ENST00000413582 ARHGEF40Q8TER5 1519 aa16.42■□□□□ 0.22
RFFL-203ENST00000413582 RAPGEF3O95398 923 aa16.42■□□□□ 0.22
RFFL-203ENST00000413582 P3H3Q8IVL6 736 aa16.41■□□□□ 0.22
RFFL-203ENST00000413582 LMTK3Q96Q04 1460 aa16.41■□□□□ 0.22
RFFL-203ENST00000413582 NUP153P49790 1475 aaKnown RBP16.39■□□□□ 0.21
RFFL-203ENST00000413582 RICTORQ6R327 1708 aa16.38■□□□□ 0.21
RFFL-203ENST00000413582 RIMS1Q86UR5 1692 aaKnown RBP16.37■□□□□ 0.21
RFFL-203ENST00000413582 FAM9AQ8IZU1 332 aaPredicted RBP16.37■□□□□ 0.21
RFFL-203ENST00000413582 ARID4BQ4LE39 1312 aaPredicted RBP16.33■□□□□ 0.2
RFFL-203ENST00000413582 CFAP74Q9C0B2 1584 aa16.33■□□□□ 0.2
RFFL-203ENST00000413582 DENND4BO75064 1496 aaPredicted RBP16.32■□□□□ 0.2
RFFL-203ENST00000413582 FHOD3Q2V2M9 1422 aa16.32■□□□□ 0.2
RFFL-203ENST00000413582 ZMYM4Q5VZL5 1548 aa16.32■□□□□ 0.2
RFFL-203ENST00000413582 SIGLEC1Q9BZZ2 1709 aa16.31■□□□□ 0.2
RFFL-203ENST00000413582 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.3■□□□□ 0.2
RFFL-203ENST00000413582 HNRNPUL2Q1KMD3 747 aaKnown RBP16.3■□□□□ 0.2
RFFL-203ENST00000413582 TTC37Q6PGP7 1564 aa16.3■□□□□ 0.2
RFFL-203ENST00000413582 FANCAO15360 1455 aa16.29■□□□□ 0.2
RFFL-203ENST00000413582 AKNAQ7Z591 1439 aa16.29■□□□□ 0.2
RFFL-203ENST00000413582 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.29■□□□□ 0.2
RFFL-203ENST00000413582 EFCAB5A4FU69 1503 aa16.27■□□□□ 0.2
RFFL-203ENST00000413582 ZFYVE16Q7Z3T8 1539 aa16.27■□□□□ 0.2
RFFL-203ENST00000413582 CSRNP3Q8WYN3 585 aa16.26■□□□□ 0.19
RFFL-203ENST00000413582 YEATS2Q9ULM3 1422 aa16.26■□□□□ 0.19
RFFL-203ENST00000413582 POGZQ7Z3K3 1410 aa16.25■□□□□ 0.19
RFFL-203ENST00000413582 FER1L4A9Z1Z3 1794 aa16.24■□□□□ 0.19
RFFL-203ENST00000413582 PLEKHD1A6NEE1 506 aa16.23■□□□□ 0.19
RFFL-203ENST00000413582 HSPA2P54652 639 aa16.23■□□□□ 0.19
RFFL-203ENST00000413582 HECW1Q76N89 1606 aa16.23■□□□□ 0.19
RFFL-203ENST00000413582 MAGI2Q86UL8 1455 aa16.22■□□□□ 0.19
RFFL-203ENST00000413582 EEA1Q15075 1411 aa16.2■□□□□ 0.18
RFFL-203ENST00000413582 CDK13Q14004 1512 aaKnown RBP16.2■□□□□ 0.18
RFFL-203ENST00000413582 RANGAP1P46060 587 aaPredicted RBP16.19■□□□□ 0.18
RFFL-203ENST00000413582 ARHGEF12Q9NZN5 1544 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms