RNA–Protein interactions for RNA: ENST00000413358.6

HCG18-234, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 916 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-234ENST00000413358 IGF1RP08069 1367 aa14.68□□□□□ -0.06
HCG18-234ENST00000413358 NUP160Q12769 1436 aa14.66□□□□□ -0.06
HCG18-234ENST00000413358 KIF21BO75037 1637 aa14.65□□□□□ -0.06
HCG18-234ENST00000413358 CEP170Q5SW79 1584 aa14.64□□□□□ -0.07
HCG18-234ENST00000413358 CARMIL1Q5VZK9 1371 aa14.64□□□□□ -0.07
HCG18-234ENST00000413358 PRXQ9BXM0 1461 aa14.63□□□□□ -0.07
HCG18-234ENST00000413358 NPM1P06748 294 aaKnown RBP eCLIP14.63□□□□□ -0.07
HCG18-234ENST00000413358 GOLGA3Q08378 1498 aa14.62□□□□□ -0.07
HCG18-234ENST00000413358 RAPGEF2Q9Y4G8 1499 aa14.62□□□□□ -0.07
HCG18-234ENST00000413358 ERCC6L2Q5T890 1561 aa14.61□□□□□ -0.07
HCG18-234ENST00000413358 JPH4Q96JJ6 628 aa14.61□□□□□ -0.07
HCG18-234ENST00000413358 PRG4Q92954 1404 aaPredicted RBP14.6□□□□□ -0.07
HCG18-234ENST00000413358 EHMT2Q96KQ7 1210 aa14.58□□□□□ -0.08
HCG18-234ENST00000413358 SHROOM2Q13796 1616 aa14.57□□□□□ -0.08
HCG18-234ENST00000413358 FAM69CQ0P6D2 419 aa14.52□□□□□ -0.09
HCG18-234ENST00000413358 UBTFP17480 764 aaKnown RBP14.5□□□□□ -0.09
HCG18-234ENST00000413358 CTTNBP2Q8WZ74 1663 aa14.49□□□□□ -0.09
HCG18-234ENST00000413358 LOC105371045A0A1W2PR82 267 aa14.47□□□□□ -0.09
HCG18-234ENST00000413358 KIAA0586Q9BVV6 1533 aa14.45□□□□□ -0.1
HCG18-234ENST00000413358 TNIKQ9UKE5 1360 aa14.45□□□□□ -0.1
HCG18-234ENST00000413358 ABCC10Q5T3U5 1492 aa14.44□□□□□ -0.1
HCG18-234ENST00000413358 IQGAP2Q13576 1575 aa14.43□□□□□ -0.1
HCG18-234ENST00000413358 KIF13AQ9H1H9 1805 aa14.43□□□□□ -0.1
HCG18-234ENST00000413358 TTBK1Q5TCY1 1321 aaPredicted RBP14.41□□□□□ -0.1
HCG18-234ENST00000413358 MAPKBP1O60336 1514 aa14.41□□□□□ -0.1
HCG18-234ENST00000413358 PTPRGP23470 1445 aa14.39□□□□□ -0.11
HCG18-234ENST00000413358 CEP162Q5TB80 1403 aa14.38□□□□□ -0.11
HCG18-234ENST00000413358 CARMIL2Q6F5E8 1435 aa14.38□□□□□ -0.11
HCG18-234ENST00000413358 RANGAP1P46060 587 aaPredicted RBP14.36□□□□□ -0.11
HCG18-234ENST00000413358 ADCY10Q96PN6 1610 aa14.36□□□□□ -0.11
HCG18-234ENST00000413358 DIP2BQ9P265 1576 aa14.34□□□□□ -0.11
HCG18-234ENST00000413358 CLIP1P30622 1438 aa14.34□□□□□ -0.11
HCG18-234ENST00000413358 EFCAB5A4FU69 1503 aa14.34□□□□□ -0.11
HCG18-234ENST00000413358 UGGT2Q9NYU1 1516 aa14.33□□□□□ -0.12
HCG18-234ENST00000413358 KDM6BO15054 1643 aa14.32□□□□□ -0.12
HCG18-234ENST00000413358 SAMD9Q5K651 1589 aa14.3□□□□□ -0.12
HCG18-234ENST00000413358 KIAA0556O60303 1618 aa14.29□□□□□ -0.12
HCG18-234ENST00000413358 TSPOAP1O95153 1857 aa14.28□□□□□ -0.12
HCG18-234ENST00000413358 ARHGAP35Q9NRY4 1499 aa14.28□□□□□ -0.12
HCG18-234ENST00000413358 ABCC2Q92887 1545 aa14.27□□□□□ -0.12
HCG18-234ENST00000413358 PLB1Q6P1J6 1458 aa14.27□□□□□ -0.12
HCG18-234ENST00000413358 DISP1Q96F81 1524 aa14.25□□□□□ -0.13
HCG18-234ENST00000413358 FHOD3Q2V2M9 1422 aa14.25□□□□□ -0.13
HCG18-234ENST00000413358 ASXL2Q76L83 1435 aa14.24□□□□□ -0.13
HCG18-234ENST00000413358 UACAQ9BZF9 1416 aa14.24□□□□□ -0.13
HCG18-234ENST00000413358 P3H3Q8IVL6 736 aa14.22□□□□□ -0.13
HCG18-234ENST00000413358 UHRF1BP1LA0JNW5 1464 aa14.22□□□□□ -0.13
HCG18-234ENST00000413358 KDM4FA0A1W2PPD8 638 aa14.21□□□□□ -0.13
HCG18-234ENST00000413358 GLI2P10070 1586 aa14.18□□□□□ -0.14
HCG18-234ENST00000413358 FMN1Q68DA7 1419 aa14.18□□□□□ -0.14
HCG18-234ENST00000413358 VPS8Q8N3P4 1428 aa14.17□□□□□ -0.14
HCG18-234ENST00000413358 TEX14Q8IWB6 1497 aa14.17□□□□□ -0.14
HCG18-234ENST00000413358 KDM5BQ9UGL1 1544 aa14.15□□□□□ -0.14
HCG18-234ENST00000413358 PCF11O94913 1555 aaKnown RBP14.14□□□□□ -0.15
HCG18-234ENST00000413358 EPRSP07814 1512 aaKnown RBP14.14□□□□□ -0.15
HCG18-234ENST00000413358 FYCO1Q9BQS8 1478 aa14.12□□□□□ -0.15
HCG18-234ENST00000413358 HECW1Q76N89 1606 aa14.11□□□□□ -0.15
HCG18-234ENST00000413358 KCNH8Q96L42 1107 aa14.1□□□□□ -0.15
HCG18-234ENST00000413358 RAPGEF6Q8TEU7 1601 aa14.1□□□□□ -0.15
HCG18-234ENST00000413358 CASKIN1Q8WXD9 1431 aa14.09□□□□□ -0.15
HCG18-234ENST00000413358 ZCCHC11Q5TAX3 1644 aaKnown RBP14.09□□□□□ -0.15
HCG18-234ENST00000413358 PPRC1Q5VV67 1664 aaKnown RBP14.08□□□□□ -0.16
HCG18-234ENST00000413358 ADGRL1O94910 1474 aa14.08□□□□□ -0.16
HCG18-234ENST00000413358 WDR7Q9Y4E6 1490 aa14.08□□□□□ -0.16
HCG18-234ENST00000413358 ABCA8O94911 1581 aa14.08□□□□□ -0.16
HCG18-234ENST00000413358 MAP3K4Q9Y6R4 1608 aa14.08□□□□□ -0.16
HCG18-234ENST00000413358 ATP1B4Q9UN42 357 aaPredicted RBP14.07□□□□□ -0.16
HCG18-234ENST00000413358 CD109Q6YHK3 1445 aa14.05□□□□□ -0.16
HCG18-234ENST00000413358 CCDC18Q5T9S5 1454 aa14.04□□□□□ -0.16
HCG18-234ENST00000413358 COL17A1Q9UMD9 1497 aaPredicted RBP14.04□□□□□ -0.16
HCG18-234ENST00000413358 NUP153P49790 1475 aaKnown RBP14.03□□□□□ -0.16
HCG18-234ENST00000413358 CFAP43Q8NDM7 1665 aa14.02□□□□□ -0.16
HCG18-234ENST00000413358 APLP2Q06481 763 aa14.02□□□□□ -0.17
HCG18-234ENST00000413358 CDK13Q14004 1512 aaKnown RBP14□□□□□ -0.17
HCG18-234ENST00000413358 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14□□□□□ -0.17
HCG18-234ENST00000413358 HNRNPUL2Q1KMD3 747 aaKnown RBP14□□□□□ -0.17
HCG18-234ENST00000413358 TIAM1Q13009 1591 aa14□□□□□ -0.17
HCG18-234ENST00000413358 MAGI3Q5TCQ9 1506 aa14□□□□□ -0.17
HCG18-234ENST00000413358 ARID3CA6NKF2 412 aa13.99□□□□□ -0.17
HCG18-234ENST00000413358 LRRIQ1Q96JM4 1722 aa13.98□□□□□ -0.17
HCG18-234ENST00000413358 ILDR1Q86SU0 546 aaPredicted RBP13.97□□□□□ -0.17
HCG18-234ENST00000413358 MAP3K1Q13233 1512 aa13.96□□□□□ -0.17
HCG18-234ENST00000413358 PHLDB1Q86UU1 1377 aa13.94□□□□□ -0.18
HCG18-234ENST00000413358 ATP10BO94823 1461 aa13.93□□□□□ -0.18
HCG18-234ENST00000413358 EHBP1L1Q8N3D4 1523 aa13.93□□□□□ -0.18
HCG18-234ENST00000413358 MTUS2Q5JR59 1369 aa13.93□□□□□ -0.18
HCG18-234ENST00000413358 CDK11AQ9UQ88 783 aaPredicted RBP13.91□□□□□ -0.18
HCG18-234ENST00000413358 LRRC9Q6ZRR7 1453 aa13.91□□□□□ -0.18
HCG18-234ENST00000413358 HECW2Q9P2P5 1572 aa13.91□□□□□ -0.18
HCG18-234ENST00000413358 ARAP3Q8WWN8 1544 aa13.89□□□□□ -0.19
HCG18-234ENST00000413358 TROQ12816 1431 aaPredicted RBP13.88□□□□□ -0.19
HCG18-234ENST00000413358 ARID4BQ4LE39 1312 aaPredicted RBP13.88□□□□□ -0.19
HCG18-234ENST00000413358 PLEKHD1A6NEE1 506 aa13.87□□□□□ -0.19
HCG18-234ENST00000413358 KIF14Q15058 1648 aa13.86□□□□□ -0.19
HCG18-234ENST00000413358 PPARGC1BQ86YN6 1023 aaKnown RBP13.86□□□□□ -0.19
HCG18-234ENST00000413358 SUPT6HQ7KZ85 1726 aaKnown RBP13.86□□□□□ -0.19
HCG18-234ENST00000413358 RAPGEF3O95398 923 aa13.85□□□□□ -0.19
HCG18-234ENST00000413358 KANK4Q5T7N3 995 aaPredicted RBP13.85□□□□□ -0.19
HCG18-234ENST00000413358 NEO1Q92859 1461 aa13.84□□□□□ -0.19
HCG18-234ENST00000413358 ABCA9Q8IUA7 1624 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms