RNA–Protein interactions for RNA: ENST00000413358.6

HCG18-234, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 916 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-234ENST00000413358 NISCHQ9Y2I1 1504 aa20.94■□□□□ 0.94
HCG18-234ENST00000413358 ABCC9O60706 1549 aa18.71■□□□□ 0.59
HCG18-234ENST00000413358 CCDC180Q9P1Z9 1646 aa18.54■□□□□ 0.56
HCG18-234ENST00000413358 RB1CC1Q8TDY2 1594 aa17.78■□□□□ 0.44
HCG18-234ENST00000413358 DCAF8L2P0C7V8 631 aa17.66■□□□□ 0.42
HCG18-234ENST00000413358 NACADO15069 1562 aa17.62■□□□□ 0.41
HCG18-234ENST00000413358 DNAJC5BQ9UF47 199 aa17.61■□□□□ 0.41
HCG18-234ENST00000413358 ZCCHC6Q5VYS8 1495 aaKnown RBP17.56■□□□□ 0.4
HCG18-234ENST00000413358 PABPN1Q86U42 306 aaKnown RBP eCLIP17.45■□□□□ 0.38
HCG18-234ENST00000413358 DCAF1Q9Y4B6 1507 aa17.34■□□□□ 0.37
HCG18-234ENST00000413358 MYO15BQ96JP2 1530 aa17.31■□□□□ 0.36
HCG18-234ENST00000413358 UNC13AQ9UPW8 1703 aa17.24■□□□□ 0.35
HCG18-234ENST00000413358 BICRAQ9NZM4 1560 aa17.14■□□□□ 0.33
HCG18-234ENST00000413358 SHROOM4Q9ULL8 1493 aa17.01■□□□□ 0.31
HCG18-234ENST00000413358 SCRIBQ14160 1630 aa16.93■□□□□ 0.3
HCG18-234ENST00000413358 CECR2Q9BXF3 1484 aa16.89■□□□□ 0.29
HCG18-234ENST00000413358 CC2D2AQ9P2K1 1620 aa16.87■□□□□ 0.29
HCG18-234ENST00000413358 EIF4G1Q04637 1599 aaKnown RBP16.8■□□□□ 0.28
HCG18-234ENST00000413358 DNAJC5Q9H3Z4 198 aa16.35■□□□□ 0.21
HCG18-234ENST00000413358 NCAPD3P42695 1498 aa16.25■□□□□ 0.19
HCG18-234ENST00000413358 ERCC6Q03468 1493 aa16.25■□□□□ 0.19
HCG18-234ENST00000413358 BAZ1AQ9NRL2 1556 aaPredicted RBP16.24■□□□□ 0.19
HCG18-234ENST00000413358 CUX2O14529 1486 aa16.21■□□□□ 0.19
HCG18-234ENST00000413358 SMARCA4P51532 1647 aa16.19■□□□□ 0.18
HCG18-234ENST00000413358 ATAD2BQ9ULI0 1458 aa16.17■□□□□ 0.18
HCG18-234ENST00000413358 SMARCA2P51531 1590 aa16.17■□□□□ 0.18
HCG18-234ENST00000413358 MROH2BQ7Z745 1585 aa16.15■□□□□ 0.18
HCG18-234ENST00000413358 HMGXB3Q12766 1538 aa16.1■□□□□ 0.17
HCG18-234ENST00000413358 RSF1Q96T23 1441 aaPredicted RBP16.09■□□□□ 0.17
HCG18-234ENST00000413358 BAZ1BQ9UIG0 1483 aaKnown RBP16.06■□□□□ 0.16
HCG18-234ENST00000413358 PEG3Q9GZU2 1588 aa16■□□□□ 0.15
HCG18-234ENST00000413358 WIZO95785 1651 aa16■□□□□ 0.15
HCG18-234ENST00000413358 SUPT5HO00267 1087 aaKnown RBP16■□□□□ 0.15
HCG18-234ENST00000413358 NESP48681 1621 aa16■□□□□ 0.15
HCG18-234ENST00000413358 LAMC3Q9Y6N6 1575 aa15.92■□□□□ 0.14
HCG18-234ENST00000413358 PDS5BQ9NTI5 1447 aa15.9■□□□□ 0.14
HCG18-234ENST00000413358 TOP2AP11388 1531 aaKnown RBP15.89■□□□□ 0.13
HCG18-234ENST00000413358 THOC2Q8NI27 1593 aaKnown RBP15.83■□□□□ 0.12
HCG18-234ENST00000413358 CADPSQ9ULU8 1353 aa15.79■□□□□ 0.12
HCG18-234ENST00000413358 KIF21AQ7Z4S6 1674 aa15.76■□□□□ 0.11
HCG18-234ENST00000413358 MRC2Q9UBG0 1479 aa15.71■□□□□ 0.1
HCG18-234ENST00000413358 TRIM41Q8WV44 630 aa15.65■□□□□ 0.1
HCG18-234ENST00000413358 CCDC88BA6NC98 1476 aa15.65■□□□□ 0.1
HCG18-234ENST00000413358 CEP164Q9UPV0 1460 aa15.64■□□□□ 0.09
HCG18-234ENST00000413358 WDR62O43379 1518 aa15.63■□□□□ 0.09
HCG18-234ENST00000413358 FANCD2Q9BXW9 1451 aa15.59■□□□□ 0.09
HCG18-234ENST00000413358 CFTRP13569 1480 aa15.54■□□□□ 0.08
HCG18-234ENST00000413358 OSCARQ8IYS5 282 aa15.53■□□□□ 0.08
HCG18-234ENST00000413358 AEBP2Q6ZN18 517 aaPredicted RBP15.44■□□□□ 0.06
HCG18-234ENST00000413358 PRDM2Q13029 1718 aa15.42■□□□□ 0.06
HCG18-234ENST00000413358 URB2Q14146 1524 aaKnown RBP15.42■□□□□ 0.06
HCG18-234ENST00000413358 IFT140Q96RY7 1462 aa15.34■□□□□ 0.05
HCG18-234ENST00000413358 ABCC8Q09428 1581 aa15.3■□□□□ 0.04
HCG18-234ENST00000413358 TOPBP1Q92547 1522 aa15.26■□□□□ 0.03
HCG18-234ENST00000413358 ZNF608Q9ULD9 1512 aaPredicted RBP15.25■□□□□ 0.03
HCG18-234ENST00000413358 WRNQ14191 1432 aaPredicted RBP eCLIP15.2■□□□□ 0.02
HCG18-234ENST00000413358 FBLN2P98095 1184 aa15.2■□□□□ 0.02
HCG18-234ENST00000413358 RIMBP3CA6NJZ7 1639 aa15.2■□□□□ 0.02
HCG18-234ENST00000413358 RIMBP3BA6NNM3 1639 aa15.2■□□□□ 0.02
HCG18-234ENST00000413358 RIMBP3Q9UFD9 1639 aa15.2■□□□□ 0.02
HCG18-234ENST00000413358 DNMBPQ6XZF7 1577 aa15.19■□□□□ 0.02
HCG18-234ENST00000413358 ARHGEF11O15085 1522 aa15.17■□□□□ 0.02
HCG18-234ENST00000413358 CYB5RLQ6IPT4 315 aa15.16■□□□□ 0.02
HCG18-234ENST00000413358 EIF4G3O43432 1585 aaKnown RBP15.15■□□□□ 0.02
HCG18-234ENST00000413358 AQRO60306 1485 aaKnown RBP eCLIP15.14■□□□□ 0.01
HCG18-234ENST00000413358 CUX1P39880 1505 aa15.14■□□□□ 0.01
HCG18-234ENST00000413358 SYNJ1O43426 1573 aa15.14■□□□□ 0.01
HCG18-234ENST00000413358 TOP2BQ02880 1626 aa15.12■□□□□ 0.01
HCG18-234ENST00000413358 BIVM-ERCC5R4GMW8 1640 aa15.12■□□□□ 0.01
HCG18-234ENST00000413358 CHIC1Q5VXU3 224 aa15.1■□□□□ 0.01
HCG18-234ENST00000413358 POLA1P09884 1462 aaPredicted RBP15.09■□□□□ 0.01
HCG18-234ENST00000413358 TRHP20396 242 aaPredicted RBP15.09■□□□□ 0.01
HCG18-234ENST00000413358 SOGA1O94964 1423 aa15.09■□□□□ 0.01
HCG18-234ENST00000413358 TARBP1Q13395 1621 aaKnown RBP15.08■□□□□ 0
HCG18-234ENST00000413358 CHMP7Q8WUX9 453 aaPredicted RBP15.06■□□□□ 0
HCG18-234ENST00000413358 TDRD9Q8NDG6 1382 aaKnown RBP15.06■□□□□ 0
HCG18-234ENST00000413358 CHD1O14646 1710 aa15.06■□□□□ 0
HCG18-234ENST00000413358 FGD5Q6ZNL6 1462 aa15.05■□□□□ -0
HCG18-234ENST00000413358 RAD54L2Q9Y4B4 1467 aa15.05■□□□□ -0
HCG18-234ENST00000413358 WDR97A6NE52 1622 aa14.99□□□□□ -0.01
HCG18-234ENST00000413358 SNAPC4Q5SXM2 1469 aa14.98□□□□□ -0.01
HCG18-234ENST00000413358 ARAP1Q96P48 1450 aa14.98□□□□□ -0.01
HCG18-234ENST00000413358 GRIN2BQ13224 1484 aa14.95□□□□□ -0.02
HCG18-234ENST00000413358 MAGI1Q96QZ7 1491 aaPredicted RBP14.95□□□□□ -0.02
HCG18-234ENST00000413358 SYNJ2O15056 1496 aa14.91□□□□□ -0.02
HCG18-234ENST00000413358 ABCA10Q8WWZ4 1543 aa14.9□□□□□ -0.02
HCG18-234ENST00000413358 GAPVD1Q14C86 1478 aa14.89□□□□□ -0.03
HCG18-234ENST00000413358 CLASP1Q7Z460 1538 aa14.87□□□□□ -0.03
HCG18-234ENST00000413358 KIF27Q86VH2 1401 aa14.85□□□□□ -0.03
HCG18-234ENST00000413358 EEA1Q15075 1411 aa14.83□□□□□ -0.03
HCG18-234ENST00000413358 ABCA5Q8WWZ7 1642 aa14.83□□□□□ -0.04
HCG18-234ENST00000413358 PBRM1Q86U86 1689 aa14.81□□□□□ -0.04
HCG18-234ENST00000413358 RUSC2Q8N2Y8 1516 aa14.78□□□□□ -0.04
HCG18-234ENST00000413358 FAM9AQ8IZU1 332 aaPredicted RBP14.78□□□□□ -0.04
HCG18-234ENST00000413358 ERICH3Q5RHP9 1530 aa14.74□□□□□ -0.05
HCG18-234ENST00000413358 GRIN2AQ12879 1464 aa14.73□□□□□ -0.05
HCG18-234ENST00000413358 CUL7Q14999 1698 aa14.71□□□□□ -0.06
HCG18-234ENST00000413358 FHAD1B1AJZ9 1412 aa14.7□□□□□ -0.06
HCG18-234ENST00000413358 CSRNP3Q8WYN3 585 aa14.69□□□□□ -0.06
HCG18-234ENST00000413358 ADAMTS12P58397 1594 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms