RNA–Protein interactions for RNA: ENST00000412237.6

LYRM2-201, Transcript of LYR motif containing 2, humanhuman

TSL 1 (best)

Gene LYRM2, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM2-201ENST00000412237 ARAP1Q96P48 1450 aa17.73■□□□□ 0.43
LYRM2-201ENST00000412237 ARHGAP35Q9NRY4 1499 aa17.72■□□□□ 0.43
LYRM2-201ENST00000412237 VPS8Q8N3P4 1428 aa17.71■□□□□ 0.43
LYRM2-201ENST00000412237 SYNJ2O15056 1496 aa17.67■□□□□ 0.42
LYRM2-201ENST00000412237 GRIN2AQ12879 1464 aa17.67■□□□□ 0.42
LYRM2-201ENST00000412237 CHMP7Q8WUX9 453 aaPredicted RBP17.66■□□□□ 0.42
LYRM2-201ENST00000412237 PPARGC1BQ86YN6 1023 aaKnown RBP17.64■□□□□ 0.42
LYRM2-201ENST00000412237 FBLN2P98095 1184 aa17.63■□□□□ 0.41
LYRM2-201ENST00000412237 EFCAB5A4FU69 1503 aa17.63■□□□□ 0.41
LYRM2-201ENST00000412237 P3H3Q8IVL6 736 aa17.62■□□□□ 0.41
LYRM2-201ENST00000412237 IQGAP2Q13576 1575 aa17.61■□□□□ 0.41
LYRM2-201ENST00000412237 PCGF6Q9BYE7 350 aa17.61■□□□□ 0.41
LYRM2-201ENST00000412237 FHOD3Q2V2M9 1422 aa17.58■□□□□ 0.4
LYRM2-201ENST00000412237 KIAA0586Q9BVV6 1533 aa17.58■□□□□ 0.4
LYRM2-201ENST00000412237 SAMD9Q5K651 1589 aa17.57■□□□□ 0.4
LYRM2-201ENST00000412237 CEP170Q5SW79 1584 aa17.57■□□□□ 0.4
LYRM2-201ENST00000412237 TRIM26Q12899 539 aaPredicted RBP17.55■□□□□ 0.4
LYRM2-201ENST00000412237 APLP2Q06481 763 aa17.55■□□□□ 0.4
LYRM2-201ENST00000412237 NUP160Q12769 1436 aa17.54■□□□□ 0.4
LYRM2-201ENST00000412237 TTBK1Q5TCY1 1321 aaPredicted RBP17.53■□□□□ 0.4
LYRM2-201ENST00000412237 CHD1O14646 1710 aa17.52■□□□□ 0.4
LYRM2-201ENST00000412237 UGGT2Q9NYU1 1516 aa17.52■□□□□ 0.4
LYRM2-201ENST00000412237 PCF11O94913 1555 aaKnown RBP17.47■□□□□ 0.39
LYRM2-201ENST00000412237 FMN1Q68DA7 1419 aa17.46■□□□□ 0.39
LYRM2-201ENST00000412237 DISP1Q96F81 1524 aa17.44■□□□□ 0.38
LYRM2-201ENST00000412237 KIAA0556O60303 1618 aa17.44■□□□□ 0.38
LYRM2-201ENST00000412237 CASKIN1Q8WXD9 1431 aa17.43■□□□□ 0.38
LYRM2-201ENST00000412237 JPH4Q96JJ6 628 aa17.43■□□□□ 0.38
LYRM2-201ENST00000412237 ATP1B4Q9UN42 357 aaPredicted RBP17.43■□□□□ 0.38
LYRM2-201ENST00000412237 FYCO1Q9BQS8 1478 aa17.42■□□□□ 0.38
LYRM2-201ENST00000412237 KANK4Q5T7N3 995 aaPredicted RBP17.39■□□□□ 0.37
LYRM2-201ENST00000412237 TIAM1Q13009 1591 aa17.39■□□□□ 0.37
LYRM2-201ENST00000412237 MAP3K1Q13233 1512 aa17.39■□□□□ 0.37
LYRM2-201ENST00000412237 CARMIL2Q6F5E8 1435 aa17.37■□□□□ 0.37
LYRM2-201ENST00000412237 CFAP43Q8NDM7 1665 aa17.36■□□□□ 0.37
LYRM2-201ENST00000412237 PRG4Q92954 1404 aaPredicted RBP17.32■□□□□ 0.36
LYRM2-201ENST00000412237 LRRC9Q6ZRR7 1453 aa17.31■□□□□ 0.36
LYRM2-201ENST00000412237 LRRIQ1Q96JM4 1722 aa17.31■□□□□ 0.36
LYRM2-201ENST00000412237 SHROOM2Q13796 1616 aa17.31■□□□□ 0.36
LYRM2-201ENST00000412237 HECW1Q76N89 1606 aa17.31■□□□□ 0.36
LYRM2-201ENST00000412237 CLASP1Q7Z460 1538 aa17.3■□□□□ 0.36
LYRM2-201ENST00000412237 RAPGEF6Q8TEU7 1601 aa17.26■□□□□ 0.35
LYRM2-201ENST00000412237 CCDC18Q5T9S5 1454 aa17.25■□□□□ 0.35
LYRM2-201ENST00000412237 EPRSP07814 1512 aaKnown RBP17.24■□□□□ 0.35
LYRM2-201ENST00000412237 PLB1Q6P1J6 1458 aa17.22■□□□□ 0.35
LYRM2-201ENST00000412237 ARID3CA6NKF2 412 aa17.22■□□□□ 0.35
LYRM2-201ENST00000412237 ERCC6L2Q5T890 1561 aa17.22■□□□□ 0.35
LYRM2-201ENST00000412237 CDK13Q14004 1512 aaKnown RBP17.22■□□□□ 0.35
LYRM2-201ENST00000412237 MTUS2Q5JR59 1369 aa17.22■□□□□ 0.35
LYRM2-201ENST00000412237 NUP153P49790 1475 aaKnown RBP17.21■□□□□ 0.35
LYRM2-201ENST00000412237 ZEB1P37275 1124 aaPredicted RBP17.21■□□□□ 0.35
LYRM2-201ENST00000412237 PTPRGP23470 1445 aa17.2■□□□□ 0.34
LYRM2-201ENST00000412237 ABCA8O94911 1581 aa17.18■□□□□ 0.34
LYRM2-201ENST00000412237 MAGI3Q5TCQ9 1506 aa17.17■□□□□ 0.34
LYRM2-201ENST00000412237 EHBP1L1Q8N3D4 1523 aa17.17■□□□□ 0.34
LYRM2-201ENST00000412237 OSCARQ8IYS5 282 aa17.17■□□□□ 0.34
LYRM2-201ENST00000412237 PHLDB1Q86UU1 1377 aa17.16■□□□□ 0.34
LYRM2-201ENST00000412237 RRBP1Q9P2E9 1410 aaKnown RBP17.16■□□□□ 0.34
LYRM2-201ENST00000412237 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.13■□□□□ 0.33
LYRM2-201ENST00000412237 HNRNPUL2Q1KMD3 747 aaKnown RBP17.13■□□□□ 0.33
LYRM2-201ENST00000412237 SUPT6HQ7KZ85 1726 aaKnown RBP17.12■□□□□ 0.33
LYRM2-201ENST00000412237 CCNB3Q8WWL7 1395 aa17.12■□□□□ 0.33
LYRM2-201ENST00000412237 NCOA2Q15596 1464 aa17.11■□□□□ 0.33
LYRM2-201ENST00000412237 UACAQ9BZF9 1416 aa17.1■□□□□ 0.33
LYRM2-201ENST00000412237 CDK11AQ9UQ88 783 aaPredicted RBP17.09■□□□□ 0.33
LYRM2-201ENST00000412237 ATP10BO94823 1461 aa17.08■□□□□ 0.32
LYRM2-201ENST00000412237 ARHGEF11O15085 1522 aa17.07■□□□□ 0.32
LYRM2-201ENST00000412237 ABCC2Q92887 1545 aa17.04■□□□□ 0.32
LYRM2-201ENST00000412237 TROQ12816 1431 aaPredicted RBP17.04■□□□□ 0.32
LYRM2-201ENST00000412237 MYOM3Q5VTT5 1437 aa17.04■□□□□ 0.32
LYRM2-201ENST00000412237 FGD6Q6ZV73 1430 aa17.04■□□□□ 0.32
LYRM2-201ENST00000412237 FAM50AQ14320 339 aaKnown RBP17.03■□□□□ 0.32
LYRM2-201ENST00000412237 PLEKHD1A6NEE1 506 aa17.01■□□□□ 0.31
LYRM2-201ENST00000412237 ITGAEP38570 1179 aa17■□□□□ 0.31
LYRM2-201ENST00000412237 UHRF1BP1LA0JNW5 1464 aa17■□□□□ 0.31
LYRM2-201ENST00000412237 ADCY10Q96PN6 1610 aa16.98■□□□□ 0.31
LYRM2-201ENST00000412237 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.98■□□□□ 0.31
LYRM2-201ENST00000412237 KIF14Q15058 1648 aa16.97■□□□□ 0.31
LYRM2-201ENST00000412237 PTPN23Q9H3S7 1636 aa16.96■□□□□ 0.31
LYRM2-201ENST00000412237 PELP1Q8IZL8 1130 aaKnown RBP16.94■□□□□ 0.3
LYRM2-201ENST00000412237 ZCCHC11Q5TAX3 1644 aaKnown RBP16.94■□□□□ 0.3
LYRM2-201ENST00000412237 MIA2Q96PC5 1412 aa16.93■□□□□ 0.3
LYRM2-201ENST00000412237 KDM5BQ9UGL1 1544 aa16.93■□□□□ 0.3
LYRM2-201ENST00000412237 TCOF1Q13428 1488 aaKnown RBP16.92■□□□□ 0.3
LYRM2-201ENST00000412237 ABCC10Q5T3U5 1492 aa16.9■□□□□ 0.3
LYRM2-201ENST00000412237 ITSN2Q9NZM3 1697 aa16.89■□□□□ 0.29
LYRM2-201ENST00000412237 GPATCH8Q9UKJ3 1502 aaKnown RBP16.89■□□□□ 0.29
LYRM2-201ENST00000412237 CCER1Q8TC90 406 aaPredicted RBP16.88■□□□□ 0.29
LYRM2-201ENST00000412237 CFDP1Q9UEE9 299 aaPredicted RBP16.86■□□□□ 0.29
LYRM2-201ENST00000412237 CDC42BPAQ5VT25 1732 aa16.86■□□□□ 0.29
LYRM2-201ENST00000412237 PTPRKQ15262 1439 aa16.84■□□□□ 0.29
LYRM2-201ENST00000412237 ZNF644Q9H582 1327 aaPredicted RBP16.84■□□□□ 0.29
LYRM2-201ENST00000412237 KCNH8Q96L42 1107 aa16.84■□□□□ 0.29
LYRM2-201ENST00000412237 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.82■□□□□ 0.28
LYRM2-201ENST00000412237 CAMSAP2Q08AD1 1489 aa16.82■□□□□ 0.28
LYRM2-201ENST00000412237 SETD5Q9C0A6 1442 aa16.81■□□□□ 0.28
LYRM2-201ENST00000412237 ZNF777Q9ULD5 760 aaPredicted RBP16.81■□□□□ 0.28
LYRM2-201ENST00000412237 TTC37Q6PGP7 1564 aa16.81■□□□□ 0.28
LYRM2-201ENST00000412237 RIMBP3CA6NJZ7 1639 aa16.81■□□□□ 0.28
LYRM2-201ENST00000412237 RIMBP3BA6NNM3 1639 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms