RNA–Protein interactions for RNA: ENST00000412237.6

LYRM2-201, Transcript of LYR motif containing 2, humanhuman

TSL 1 (best)

Gene LYRM2, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM2-201ENST00000412237 NISCHQ9Y2I1 1504 aa25.67■■□□□ 1.7
LYRM2-201ENST00000412237 CCDC180Q9P1Z9 1646 aa22.4■■□□□ 1.18
LYRM2-201ENST00000412237 ZCCHC6Q5VYS8 1495 aaKnown RBP21.54■■□□□ 1.04
LYRM2-201ENST00000412237 ABCC9O60706 1549 aa21.29■■□□□ 1
LYRM2-201ENST00000412237 DCAF8L2P0C7V8 631 aa21.27■■□□□ 1
LYRM2-201ENST00000412237 DCAF1Q9Y4B6 1507 aa21.2■□□□□ 0.98
LYRM2-201ENST00000412237 MYO15BQ96JP2 1530 aa20.97■□□□□ 0.95
LYRM2-201ENST00000412237 SHROOM4Q9ULL8 1493 aa20.94■□□□□ 0.94
LYRM2-201ENST00000412237 NACADO15069 1562 aa20.88■□□□□ 0.93
LYRM2-201ENST00000412237 RB1CC1Q8TDY2 1594 aa20.73■□□□□ 0.91
LYRM2-201ENST00000412237 SCRIBQ14160 1630 aa20.63■□□□□ 0.89
LYRM2-201ENST00000412237 UNC13AQ9UPW8 1703 aa20.32■□□□□ 0.84
LYRM2-201ENST00000412237 BICRAQ9NZM4 1560 aa20.12■□□□□ 0.81
LYRM2-201ENST00000412237 SUPT5HO00267 1087 aaKnown RBP20.12■□□□□ 0.81
LYRM2-201ENST00000412237 PABPN1Q86U42 306 aaKnown RBP eCLIP20.08■□□□□ 0.8
LYRM2-201ENST00000412237 CECR2Q9BXF3 1484 aa19.97■□□□□ 0.79
LYRM2-201ENST00000412237 RSF1Q96T23 1441 aaPredicted RBP19.89■□□□□ 0.78
LYRM2-201ENST00000412237 MROH2BQ7Z745 1585 aa19.84■□□□□ 0.77
LYRM2-201ENST00000412237 BAZ1AQ9NRL2 1556 aaPredicted RBP19.82■□□□□ 0.76
LYRM2-201ENST00000412237 SMARCA4P51532 1647 aa19.75■□□□□ 0.75
LYRM2-201ENST00000412237 WIZO95785 1651 aa19.68■□□□□ 0.74
LYRM2-201ENST00000412237 EIF4G1Q04637 1599 aaKnown RBP19.51■□□□□ 0.71
LYRM2-201ENST00000412237 PEG3Q9GZU2 1588 aa19.48■□□□□ 0.71
LYRM2-201ENST00000412237 TOP2AP11388 1531 aaKnown RBP19.46■□□□□ 0.71
LYRM2-201ENST00000412237 ATAD2BQ9ULI0 1458 aa19.44■□□□□ 0.7
LYRM2-201ENST00000412237 SMARCA2P51531 1590 aa19.43■□□□□ 0.7
LYRM2-201ENST00000412237 BAZ1BQ9UIG0 1483 aaKnown RBP19.33■□□□□ 0.69
LYRM2-201ENST00000412237 CCDC88BA6NC98 1476 aa19.28■□□□□ 0.68
LYRM2-201ENST00000412237 NCAPD3P42695 1498 aa19.28■□□□□ 0.68
LYRM2-201ENST00000412237 CC2D2AQ9P2K1 1620 aa19.25■□□□□ 0.67
LYRM2-201ENST00000412237 HMGXB3Q12766 1538 aa19.24■□□□□ 0.67
LYRM2-201ENST00000412237 CHIC1Q5VXU3 224 aa19.2■□□□□ 0.66
LYRM2-201ENST00000412237 TRIM41Q8WV44 630 aa18.9■□□□□ 0.62
LYRM2-201ENST00000412237 ABCC8Q09428 1581 aa18.86■□□□□ 0.61
LYRM2-201ENST00000412237 DNAJC5BQ9UF47 199 aa18.84■□□□□ 0.61
LYRM2-201ENST00000412237 CFTRP13569 1480 aa18.83■□□□□ 0.61
LYRM2-201ENST00000412237 CADPSQ9ULU8 1353 aa18.79■□□□□ 0.6
LYRM2-201ENST00000412237 AEBP2Q6ZN18 517 aaPredicted RBP18.77■□□□□ 0.6
LYRM2-201ENST00000412237 PRDM2Q13029 1718 aa18.74■□□□□ 0.59
LYRM2-201ENST00000412237 WRNQ14191 1432 aaPredicted RBP eCLIP18.73■□□□□ 0.59
LYRM2-201ENST00000412237 NESP48681 1621 aa18.67■□□□□ 0.58
LYRM2-201ENST00000412237 SYNJ1O43426 1573 aa18.66■□□□□ 0.58
LYRM2-201ENST00000412237 LAMC3Q9Y6N6 1575 aa18.63■□□□□ 0.57
LYRM2-201ENST00000412237 FANCD2Q9BXW9 1451 aa18.59■□□□□ 0.57
LYRM2-201ENST00000412237 FAM9AQ8IZU1 332 aaPredicted RBP18.59■□□□□ 0.57
LYRM2-201ENST00000412237 TOP2BQ02880 1626 aa18.58■□□□□ 0.56
LYRM2-201ENST00000412237 CUX1P39880 1505 aa18.56■□□□□ 0.56
LYRM2-201ENST00000412237 BIVM-ERCC5R4GMW8 1640 aa18.56■□□□□ 0.56
LYRM2-201ENST00000412237 PDS5BQ9NTI5 1447 aa18.5■□□□□ 0.55
LYRM2-201ENST00000412237 LOC105371045A0A1W2PR82 267 aa18.49■□□□□ 0.55
LYRM2-201ENST00000412237 SOGA1O94964 1423 aa18.48■□□□□ 0.55
LYRM2-201ENST00000412237 CEP164Q9UPV0 1460 aa18.48■□□□□ 0.55
LYRM2-201ENST00000412237 KIF21AQ7Z4S6 1674 aa18.43■□□□□ 0.54
LYRM2-201ENST00000412237 RUSC2Q8N2Y8 1516 aa18.43■□□□□ 0.54
LYRM2-201ENST00000412237 EEA1Q15075 1411 aa18.41■□□□□ 0.54
LYRM2-201ENST00000412237 DNMBPQ6XZF7 1577 aa18.41■□□□□ 0.54
LYRM2-201ENST00000412237 TOPBP1Q92547 1522 aa18.38■□□□□ 0.53
LYRM2-201ENST00000412237 URB2Q14146 1524 aaKnown RBP18.37■□□□□ 0.53
LYRM2-201ENST00000412237 FGD5Q6ZNL6 1462 aa18.37■□□□□ 0.53
LYRM2-201ENST00000412237 CSRNP3Q8WYN3 585 aa18.35■□□□□ 0.53
LYRM2-201ENST00000412237 EHMT2Q96KQ7 1210 aa18.34■□□□□ 0.53
LYRM2-201ENST00000412237 POLA1P09884 1462 aaPredicted RBP18.28■□□□□ 0.52
LYRM2-201ENST00000412237 MRC2Q9UBG0 1479 aa18.28■□□□□ 0.52
LYRM2-201ENST00000412237 KIF27Q86VH2 1401 aa18.26■□□□□ 0.51
LYRM2-201ENST00000412237 ERCC6Q03468 1493 aa18.25■□□□□ 0.51
LYRM2-201ENST00000412237 CUX2O14529 1486 aa18.25■□□□□ 0.51
LYRM2-201ENST00000412237 RAD54L2Q9Y4B4 1467 aa18.24■□□□□ 0.51
LYRM2-201ENST00000412237 ABCA10Q8WWZ4 1543 aa18.19■□□□□ 0.5
LYRM2-201ENST00000412237 KIF21BO75037 1637 aa18.18■□□□□ 0.5
LYRM2-201ENST00000412237 GOLGA3Q08378 1498 aa18.17■□□□□ 0.5
LYRM2-201ENST00000412237 WDR62O43379 1518 aa18.17■□□□□ 0.5
LYRM2-201ENST00000412237 THOC2Q8NI27 1593 aaKnown RBP18.14■□□□□ 0.49
LYRM2-201ENST00000412237 WDR97A6NE52 1622 aa18.14■□□□□ 0.49
LYRM2-201ENST00000412237 UBTFP17480 764 aaKnown RBP18.11■□□□□ 0.49
LYRM2-201ENST00000412237 PRXQ9BXM0 1461 aa18.11■□□□□ 0.49
LYRM2-201ENST00000412237 RAPGEF2Q9Y4G8 1499 aa18.11■□□□□ 0.49
LYRM2-201ENST00000412237 IGF1RP08069 1367 aa18.11■□□□□ 0.49
LYRM2-201ENST00000412237 TARBP1Q13395 1621 aaKnown RBP18.1■□□□□ 0.49
LYRM2-201ENST00000412237 TNIKQ9UKE5 1360 aa18.1■□□□□ 0.49
LYRM2-201ENST00000412237 ERICH3Q5RHP9 1530 aa18.07■□□□□ 0.48
LYRM2-201ENST00000412237 TDRD9Q8NDG6 1382 aaKnown RBP18.07■□□□□ 0.48
LYRM2-201ENST00000412237 ABCA5Q8WWZ7 1642 aa18.05■□□□□ 0.48
LYRM2-201ENST00000412237 IFT140Q96RY7 1462 aa18.03■□□□□ 0.48
LYRM2-201ENST00000412237 CARMIL1Q5VZK9 1371 aa18.03■□□□□ 0.48
LYRM2-201ENST00000412237 GAPVD1Q14C86 1478 aa18.02■□□□□ 0.48
LYRM2-201ENST00000412237 CEP162Q5TB80 1403 aa18■□□□□ 0.47
LYRM2-201ENST00000412237 CUL7Q14999 1698 aa17.97■□□□□ 0.47
LYRM2-201ENST00000412237 AQRO60306 1485 aaKnown RBP eCLIP17.96■□□□□ 0.47
LYRM2-201ENST00000412237 ZNF608Q9ULD9 1512 aaPredicted RBP17.95■□□□□ 0.46
LYRM2-201ENST00000412237 PBRM1Q86U86 1689 aa17.93■□□□□ 0.46
LYRM2-201ENST00000412237 GRIN2BQ13224 1484 aa17.89■□□□□ 0.45
LYRM2-201ENST00000412237 CLIP1P30622 1438 aa17.89■□□□□ 0.45
LYRM2-201ENST00000412237 EIF4G3O43432 1585 aaKnown RBP17.88■□□□□ 0.45
LYRM2-201ENST00000412237 RANGAP1P46060 587 aaPredicted RBP17.87■□□□□ 0.45
LYRM2-201ENST00000412237 ADAMTS12P58397 1594 aa17.83■□□□□ 0.44
LYRM2-201ENST00000412237 FHAD1B1AJZ9 1412 aa17.83■□□□□ 0.44
LYRM2-201ENST00000412237 HRCP23327 699 aa17.8■□□□□ 0.44
LYRM2-201ENST00000412237 SNAPC4Q5SXM2 1469 aa17.79■□□□□ 0.44
LYRM2-201ENST00000412237 CTTNBP2Q8WZ74 1663 aa17.76■□□□□ 0.43
LYRM2-201ENST00000412237 MAGI1Q96QZ7 1491 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms