RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 MAP3K1Q13233 1512 aa37.18■■■■□ 3.54
VRK2-202ENST00000412104 FHAD1B1AJZ9 1412 aa37.18■■■■□ 3.54
VRK2-202ENST00000412104 HNRNPUL2Q1KMD3 747 aaKnown RBP37.18■■■■□ 3.54
VRK2-202ENST00000412104 WDR62O43379 1518 aa37.17■■■■□ 3.54
VRK2-202ENST00000412104 TIAM1Q13009 1591 aa37.17■■■■□ 3.54
VRK2-202ENST00000412104 PCF11O94913 1555 aaKnown RBP37.14■■■■□ 3.54
VRK2-202ENST00000412104 FHOD3Q2V2M9 1422 aa37.12■■■■□ 3.53
VRK2-202ENST00000412104 P3H3Q8IVL6 736 aa37.08■■■■□ 3.53
VRK2-202ENST00000412104 RRBP1Q9P2E9 1410 aaKnown RBP37.06■■■■□ 3.52
VRK2-202ENST00000412104 CFAP43Q8NDM7 1665 aa37.06■■■■□ 3.52
VRK2-202ENST00000412104 AQRO60306 1485 aaKnown RBP eCLIP37.05■■■■□ 3.527e-6■□□□□ 9.9
VRK2-202ENST00000412104 IFT140Q96RY7 1462 aa37.04■■■■□ 3.52
VRK2-202ENST00000412104 ADAMTS12P58397 1594 aa37.02■■■■□ 3.52
VRK2-202ENST00000412104 SAMD9Q5K651 1589 aa37.02■■■■□ 3.52
VRK2-202ENST00000412104 FYCO1Q9BQS8 1478 aa36.99■■■■□ 3.51
VRK2-202ENST00000412104 ERCC6Q03468 1493 aa36.97■■■■□ 3.51
VRK2-202ENST00000412104 LRRC9Q6ZRR7 1453 aa36.97■■■■□ 3.51
VRK2-202ENST00000412104 GRIN2BQ13224 1484 aa36.97■■■■□ 3.51
VRK2-202ENST00000412104 CASKIN1Q8WXD9 1431 aa36.94■■■■□ 3.5
VRK2-202ENST00000412104 ZNF608Q9ULD9 1512 aaPredicted RBP36.92■■■■□ 3.5
VRK2-202ENST00000412104 THOC2Q8NI27 1593 aaKnown RBP36.92■■■■□ 3.5
VRK2-202ENST00000412104 FMN1Q68DA7 1419 aa36.91■■■■□ 3.5
VRK2-202ENST00000412104 CCNB3Q8WWL7 1395 aa36.89■■■■□ 3.5
VRK2-202ENST00000412104 SNAPC4Q5SXM2 1469 aa36.85■■■■□ 3.49
VRK2-202ENST00000412104 EIF4G3O43432 1585 aaKnown RBP36.81■■■■□ 3.48
VRK2-202ENST00000412104 ATP1B4Q9UN42 357 aaPredicted RBP36.79■■■■□ 3.48
VRK2-202ENST00000412104 IQGAP2Q13576 1575 aa36.79■■■■□ 3.48
VRK2-202ENST00000412104 PHLDB1Q86UU1 1377 aa36.73■■■■□ 3.47
VRK2-202ENST00000412104 LRRIQ1Q96JM4 1722 aa36.69■■■■□ 3.46
VRK2-202ENST00000412104 UGGT2Q9NYU1 1516 aa36.58■■■■□ 3.45
VRK2-202ENST00000412104 GRIN2AQ12879 1464 aa36.57■■■■□ 3.45
VRK2-202ENST00000412104 MAGI1Q96QZ7 1491 aaPredicted RBP36.54■■■■□ 3.44
VRK2-202ENST00000412104 DHX57Q6P158 1386 aaKnown RBP36.54■■■■□ 3.44
VRK2-202ENST00000412104 ITGAEP38570 1179 aa36.52■■■■□ 3.44
VRK2-202ENST00000412104 KIAA0586Q9BVV6 1533 aa36.52■■■■□ 3.44
VRK2-202ENST00000412104 MTUS2Q5JR59 1369 aa36.49■■■■□ 3.43
VRK2-202ENST00000412104 HECW1Q76N89 1606 aa36.48■■■■□ 3.43
VRK2-202ENST00000412104 CLSPNQ9HAW4 1339 aa36.46■■■■□ 3.43
VRK2-202ENST00000412104 CCDC18Q5T9S5 1454 aa36.45■■■■□ 3.43
VRK2-202ENST00000412104 EHBP1L1Q8N3D4 1523 aa36.44■■■■□ 3.42
VRK2-202ENST00000412104 SYNJ2O15056 1496 aa36.43■■■■□ 3.42
VRK2-202ENST00000412104 FAM50AQ14320 339 aaKnown RBP36.42■■■■□ 3.42
VRK2-202ENST00000412104 KIAA0556O60303 1618 aa36.42■■■■□ 3.42
VRK2-202ENST00000412104 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.4■■■■□ 3.42
VRK2-202ENST00000412104 SUPT6HQ7KZ85 1726 aaKnown RBP36.39■■■■□ 3.42
VRK2-202ENST00000412104 DISP1Q96F81 1524 aa36.38■■■■□ 3.41
VRK2-202ENST00000412104 FGD6Q6ZV73 1430 aa36.37■■■■□ 3.41
VRK2-202ENST00000412104 NCOA2Q15596 1464 aa36.36■■■■□ 3.41
VRK2-202ENST00000412104 CEP170Q5SW79 1584 aa36.35■■■■□ 3.41
VRK2-202ENST00000412104 RAB3GAP2Q9H2M9 1393 aa36.35■■■■□ 3.41
VRK2-202ENST00000412104 MAGI3Q5TCQ9 1506 aa36.34■■■■□ 3.41
VRK2-202ENST00000412104 EPRSP07814 1512 aaKnown RBP36.32■■■■□ 3.4
VRK2-202ENST00000412104 SETD5Q9C0A6 1442 aa36.31■■■■□ 3.4
VRK2-202ENST00000412104 CHMP7Q8WUX9 453 aaPredicted RBP36.31■■■■□ 3.4
VRK2-202ENST00000412104 ARHGEF11O15085 1522 aa36.27■■■■□ 3.4
VRK2-202ENST00000412104 MYOM3Q5VTT5 1437 aa36.26■■■■□ 3.4
VRK2-202ENST00000412104 CDK13Q14004 1512 aaKnown RBP36.24■■■■□ 3.39
VRK2-202ENST00000412104 NUP160Q12769 1436 aa36.23■■■■□ 3.39
VRK2-202ENST00000412104 FBLN2P98095 1184 aa36.18■■■■□ 3.38
VRK2-202ENST00000412104 ZNF316A6NFI3 1004 aaPredicted RBP36.17■■■■□ 3.38
VRK2-202ENST00000412104 RAPGEF6Q8TEU7 1601 aa36.16■■■■□ 3.38
VRK2-202ENST00000412104 PTPN23Q9H3S7 1636 aa36.13■■■■□ 3.37
VRK2-202ENST00000412104 MAPKBP1O60336 1514 aa36.12■■■■□ 3.37
VRK2-202ENST00000412104 NUP153P49790 1475 aaKnown RBP36.1■■■■□ 3.37
VRK2-202ENST00000412104 DIEXFQ68CQ4 756 aaKnown RBP36.09■■■■□ 3.37
VRK2-202ENST00000412104 PTPRKQ15262 1439 aa36.04■■■■□ 3.36
VRK2-202ENST00000412104 ARID3CA6NKF2 412 aa36.04■■■■□ 3.36
VRK2-202ENST00000412104 TCOF1Q13428 1488 aaKnown RBP36.03■■■■□ 3.36
VRK2-202ENST00000412104 CARMIL2Q6F5E8 1435 aa36.01■■■■□ 3.36
VRK2-202ENST00000412104 JPH4Q96JJ6 628 aa35.99■■■■□ 3.35
VRK2-202ENST00000412104 HFM1A2PYH4 1435 aa35.97■■■■□ 3.35
VRK2-202ENST00000412104 MIA2Q96PC5 1412 aa35.94■■■■□ 3.34
VRK2-202ENST00000412104 PLB1Q6P1J6 1458 aa35.93■■■■□ 3.34
VRK2-202ENST00000412104 CHD1O14646 1710 aa35.87■■■■□ 3.33
VRK2-202ENST00000412104 NAIPQ13075 1403 aa35.86■■■■□ 3.33
VRK2-202ENST00000412104 CDK11AQ9UQ88 783 aaPredicted RBP35.84■■■■□ 3.33
VRK2-202ENST00000412104 ABCA8O94911 1581 aa35.8■■■■□ 3.32
VRK2-202ENST00000412104 TROQ12816 1431 aaPredicted RBP35.79■■■■□ 3.32
VRK2-202ENST00000412104 GCC2Q8IWJ2 1684 aa35.79■■■■□ 3.32
VRK2-202ENST00000412104 UACAQ9BZF9 1416 aa35.76■■■■□ 3.31
VRK2-202ENST00000412104 PRG4Q92954 1404 aaPredicted RBP35.75■■■■□ 3.31
VRK2-202ENST00000412104 ADCY10Q96PN6 1610 aa35.75■■■■□ 3.31
VRK2-202ENST00000412104 AKNAQ7Z591 1439 aa35.74■■■■□ 3.31
VRK2-202ENST00000412104 KIF14Q15058 1648 aa35.68■■■■□ 3.3
VRK2-202ENST00000412104 ITSN2Q9NZM3 1697 aa35.68■■■■□ 3.3
VRK2-202ENST00000412104 SIN3AQ96ST3 1273 aa35.67■■■■□ 3.3
VRK2-202ENST00000412104 DNMT1P26358 1616 aaKnown RBP35.67■■■■□ 3.3
VRK2-202ENST00000412104 CHIC2Q9UKJ5 165 aa35.65■■■■□ 3.3
VRK2-202ENST00000412104 SHROOM2Q13796 1616 aa35.64■■■■□ 3.3
VRK2-202ENST00000412104 RRP7BPQ9NSQ0 103 aa35.63■■■■□ 3.29
VRK2-202ENST00000412104 DAPK1P53355 1430 aa35.63■■■■□ 3.29
VRK2-202ENST00000412104 NEUROD1Q13562 356 aa35.61■■■■□ 3.29
VRK2-202ENST00000412104 ATP10BO94823 1461 aa35.59■■■■□ 3.29
VRK2-202ENST00000412104 KDM6BO15054 1643 aa35.57■■■■□ 3.29
VRK2-202ENST00000412104 PTPRGP23470 1445 aa35.57■■■■□ 3.28
VRK2-202ENST00000412104 GPATCH8Q9UKJ3 1502 aaKnown RBP35.57■■■■□ 3.28
VRK2-202ENST00000412104 TIMELESSQ9UNS1 1208 aa35.57■■■■□ 3.28
VRK2-202ENST00000412104 ABCC5O15440 1437 aa35.56■■■■□ 3.28
VRK2-202ENST00000412104 ZNF644Q9H582 1327 aaPredicted RBP35.55■■■■□ 3.28
VRK2-202ENST00000412104 CAMSAP2Q08AD1 1489 aa35.54■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms