RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 GRIN2BQ13224 1484 aa30.23■■■□□ 2.43
LIMS2-207ENST00000409808 EIF4G3O43432 1585 aaKnown RBP30.21■■■□□ 2.43
LIMS2-207ENST00000409808 CTTNBP2Q8WZ74 1663 aa30.18■■■□□ 2.42
LIMS2-207ENST00000409808 ADAMTS12P58397 1594 aa30.16■■■□□ 2.42
LIMS2-207ENST00000409808 FHAD1B1AJZ9 1412 aa30.16■■■□□ 2.42
LIMS2-207ENST00000409808 P3H3Q8IVL6 736 aa30.11■■■□□ 2.41
LIMS2-207ENST00000409808 SNAPC4Q5SXM2 1469 aa30.1■■■□□ 2.41
LIMS2-207ENST00000409808 CCER1Q8TC90 406 aaPredicted RBP30.04■■■□□ 2.4
LIMS2-207ENST00000409808 APLP2Q06481 763 aa30.02■■■□□ 2.4
LIMS2-207ENST00000409808 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.98■■■□□ 2.39
LIMS2-207ENST00000409808 FHOD3Q2V2M9 1422 aa29.97■■■□□ 2.39
LIMS2-207ENST00000409808 EFCAB5A4FU69 1503 aa29.93■■■□□ 2.38
LIMS2-207ENST00000409808 MAGI1Q96QZ7 1491 aaPredicted RBP29.93■■■□□ 2.38
LIMS2-207ENST00000409808 GRIN2AQ12879 1464 aa29.9■■■□□ 2.38
LIMS2-207ENST00000409808 FBLN2P98095 1184 aa29.89■■■□□ 2.38
LIMS2-207ENST00000409808 CHMP7Q8WUX9 453 aaPredicted RBP29.88■■■□□ 2.37
LIMS2-207ENST00000409808 KANK4Q5T7N3 995 aaPredicted RBP29.86■■■□□ 2.37
LIMS2-207ENST00000409808 IQGAP2Q13576 1575 aa29.86■■■□□ 2.37
LIMS2-207ENST00000409808 SAMD9Q5K651 1589 aa29.85■■■□□ 2.37
LIMS2-207ENST00000409808 SYNJ2O15056 1496 aa29.85■■■□□ 2.37
LIMS2-207ENST00000409808 PCF11O94913 1555 aaKnown RBP29.81■■■□□ 2.36
LIMS2-207ENST00000409808 ATP1B4Q9UN42 357 aaPredicted RBP29.79■■■□□ 2.36
LIMS2-207ENST00000409808 KIAA0586Q9BVV6 1533 aa29.75■■■□□ 2.35
LIMS2-207ENST00000409808 CEP170Q5SW79 1584 aa29.75■■■□□ 2.35
LIMS2-207ENST00000409808 FMN1Q68DA7 1419 aa29.7■■■□□ 2.34
LIMS2-207ENST00000409808 TIAM1Q13009 1591 aa29.69■■■□□ 2.34
LIMS2-207ENST00000409808 CASKIN1Q8WXD9 1431 aa29.68■■■□□ 2.34
LIMS2-207ENST00000409808 UGGT2Q9NYU1 1516 aa29.68■■■□□ 2.34
LIMS2-207ENST00000409808 FYCO1Q9BQS8 1478 aa29.66■■■□□ 2.34
LIMS2-207ENST00000409808 NUP160Q12769 1436 aa29.64■■■□□ 2.33
LIMS2-207ENST00000409808 MAP3K1Q13233 1512 aa29.61■■■□□ 2.33
LIMS2-207ENST00000409808 DISP1Q96F81 1524 aa29.6■■■□□ 2.33
LIMS2-207ENST00000409808 CFAP43Q8NDM7 1665 aa29.59■■■□□ 2.33
LIMS2-207ENST00000409808 CHD1O14646 1710 aa29.58■■■□□ 2.33
LIMS2-207ENST00000409808 LRRC9Q6ZRR7 1453 aa29.57■■■□□ 2.32
LIMS2-207ENST00000409808 KIAA0556O60303 1618 aa29.56■■■□□ 2.32
LIMS2-207ENST00000409808 LRRIQ1Q96JM4 1722 aa29.56■■■□□ 2.32
LIMS2-207ENST00000409808 SCAF1Q9H7N4 1312 aaKnown RBP29.55■■■□□ 2.32
LIMS2-207ENST00000409808 DIEXFQ68CQ4 756 aaKnown RBP29.54■■■□□ 2.32
LIMS2-207ENST00000409808 JPH4Q96JJ6 628 aa29.52■■■□□ 2.32
LIMS2-207ENST00000409808 HNRNPUL2Q1KMD3 747 aaKnown RBP29.49■■■□□ 2.31
LIMS2-207ENST00000409808 PELP1Q8IZL8 1130 aaKnown RBP29.46■■■□□ 2.31
LIMS2-207ENST00000409808 ARID3CA6NKF2 412 aa29.42■■■□□ 2.3
LIMS2-207ENST00000409808 ACIN1Q9UKV3 1341 aaKnown RBP29.4■■■□□ 2.3
LIMS2-207ENST00000409808 HECW1Q76N89 1606 aa29.38■■■□□ 2.29
LIMS2-207ENST00000409808 PHLDB1Q86UU1 1377 aa29.38■■■□□ 2.29
LIMS2-207ENST00000409808 RRBP1Q9P2E9 1410 aaKnown RBP29.38■■■□□ 2.29
LIMS2-207ENST00000409808 ZNF316A6NFI3 1004 aaPredicted RBP29.37■■■□□ 2.29
LIMS2-207ENST00000409808 CARMIL2Q6F5E8 1435 aa29.37■■■□□ 2.29
LIMS2-207ENST00000409808 MTUS2Q5JR59 1369 aa29.35■■■□□ 2.29
LIMS2-207ENST00000409808 CDK13Q14004 1512 aaKnown RBP29.33■■■□□ 2.29
LIMS2-207ENST00000409808 EPRSP07814 1512 aaKnown RBP29.33■■■□□ 2.29
LIMS2-207ENST00000409808 CENPBP07199 599 aaPredicted RBP29.33■■■□□ 2.29
LIMS2-207ENST00000409808 CCNB3Q8WWL7 1395 aa29.32■■■□□ 2.28
LIMS2-207ENST00000409808 PRG4Q92954 1404 aaPredicted RBP29.31■■■□□ 2.28
LIMS2-207ENST00000409808 CCDC18Q5T9S5 1454 aa29.3■■■□□ 2.28
LIMS2-207ENST00000409808 MAGI3Q5TCQ9 1506 aa29.3■■■□□ 2.28
LIMS2-207ENST00000409808 RAPGEF6Q8TEU7 1601 aa29.29■■■□□ 2.28
LIMS2-207ENST00000409808 PLB1Q6P1J6 1458 aa29.28■■■□□ 2.28
LIMS2-207ENST00000409808 NUP153P49790 1475 aaKnown RBP29.26■■■□□ 2.27
LIMS2-207ENST00000409808 ITGAEP38570 1179 aa29.23■■■□□ 2.27
LIMS2-207ENST00000409808 EHBP1L1Q8N3D4 1523 aa29.21■■■□□ 2.27
LIMS2-207ENST00000409808 NEUROD1Q13562 356 aa29.21■■■□□ 2.27
LIMS2-207ENST00000409808 SHROOM2Q13796 1616 aa29.2■■■□□ 2.26
LIMS2-207ENST00000409808 NCOA2Q15596 1464 aa29.19■■■□□ 2.26
LIMS2-207ENST00000409808 FAM50AQ14320 339 aaKnown RBP29.18■■■□□ 2.26
LIMS2-207ENST00000409808 SUPT6HQ7KZ85 1726 aaKnown RBP29.17■■■□□ 2.26
LIMS2-207ENST00000409808 ERCC6L2Q5T890 1561 aa29.17■■■□□ 2.26
LIMS2-207ENST00000409808 CLASP1Q7Z460 1538 aa29.15■■■□□ 2.26
LIMS2-207ENST00000409808 CLSPNQ9HAW4 1339 aa29.13■■■□□ 2.25
LIMS2-207ENST00000409808 PTPRGP23470 1445 aa29.12■■■□□ 2.25
LIMS2-207ENST00000409808 ABCA8O94911 1581 aa29.11■■■□□ 2.25
LIMS2-207ENST00000409808 FGD6Q6ZV73 1430 aa29.09■■■□□ 2.25
LIMS2-207ENST00000409808 ARHGEF11O15085 1522 aa29.07■■■□□ 2.24
LIMS2-207ENST00000409808 MYOM3Q5VTT5 1437 aa29.06■■■□□ 2.24
LIMS2-207ENST00000409808 CDK11AQ9UQ88 783 aaPredicted RBP29.01■■■□□ 2.23
LIMS2-207ENST00000409808 ATP10BO94823 1461 aa28.99■■■□□ 2.23
LIMS2-207ENST00000409808 GTF3C3Q9Y5Q9 886 aa28.95■■■□□ 2.22
LIMS2-207ENST00000409808 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.94■■■□□ 2.22
LIMS2-207ENST00000409808 TROQ12816 1431 aaPredicted RBP28.94■■■□□ 2.22
LIMS2-207ENST00000409808 PTPN23Q9H3S7 1636 aa28.93■■■□□ 2.22
LIMS2-207ENST00000409808 UACAQ9BZF9 1416 aa28.93■■■□□ 2.22
LIMS2-207ENST00000409808 KIF14Q15058 1648 aa28.89■■■□□ 2.22
LIMS2-207ENST00000409808 DHX57Q6P158 1386 aaKnown RBP28.88■■■□□ 2.21
LIMS2-207ENST00000409808 PLEKHD1A6NEE1 506 aa28.87■■■□□ 2.21
LIMS2-207ENST00000409808 OSCARQ8IYS5 282 aa28.87■■■□□ 2.21
LIMS2-207ENST00000409808 PTPRKQ15262 1439 aa28.86■■■□□ 2.21
LIMS2-207ENST00000409808 RAB3GAP2Q9H2M9 1393 aa28.84■■■□□ 2.21
LIMS2-207ENST00000409808 TCOF1Q13428 1488 aaKnown RBP28.82■■■□□ 2.2
LIMS2-207ENST00000409808 ABCC2Q92887 1545 aa28.82■■■□□ 2.2
LIMS2-207ENST00000409808 ADCY10Q96PN6 1610 aa28.82■■■□□ 2.2
LIMS2-207ENST00000409808 MIER1Q8N108 512 aa28.81■■■□□ 2.2
LIMS2-207ENST00000409808 MIA2Q96PC5 1412 aa28.81■■■□□ 2.2
LIMS2-207ENST00000409808 SETD5Q9C0A6 1442 aa28.81■■■□□ 2.2
LIMS2-207ENST00000409808 ZNF644Q9H582 1327 aaPredicted RBP28.79■■■□□ 2.2
LIMS2-207ENST00000409808 GPATCH8Q9UKJ3 1502 aaKnown RBP28.74■■■□□ 2.19
LIMS2-207ENST00000409808 CHIC2Q9UKJ5 165 aa28.72■■■□□ 2.19
LIMS2-207ENST00000409808 CFDP1Q9UEE9 299 aaPredicted RBP28.71■■■□□ 2.19
LIMS2-207ENST00000409808 ABCC10Q5T3U5 1492 aa28.7■■■□□ 2.18
LIMS2-207ENST00000409808 ITSN2Q9NZM3 1697 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms