RNA–Protein interactions for RNA: ENST00000409549.5

LOXL3-204, Transcript of lysyl oxidase like 3, humanhuman

TSL 2 BASIC

Gene LOXL3, Length 2,897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LOXL3-204ENST00000409549 WDR62O43379 1518 aa18.93■□□□□ 0.62
LOXL3-204ENST00000409549 CUX2O14529 1486 aa18.92■□□□□ 0.62
LOXL3-204ENST00000409549 KIF27Q86VH2 1401 aa18.9■□□□□ 0.62
LOXL3-204ENST00000409549 KCNH8Q96L42 1107 aa18.87■□□□□ 0.61
LOXL3-204ENST00000409549 KIF21BO75037 1637 aa18.86■□□□□ 0.61
LOXL3-204ENST00000409549 PRXQ9BXM0 1461 aa18.8■□□□□ 0.6
LOXL3-204ENST00000409549 IGF1RP08069 1367 aa18.79■□□□□ 0.6
LOXL3-204ENST00000409549 APLP2Q06481 763 aa18.77■□□□□ 0.6
LOXL3-204ENST00000409549 CLIP1P30622 1438 aa18.76■□□□□ 0.59
LOXL3-204ENST00000409549 IFT140Q96RY7 1462 aa18.76■□□□□ 0.59
LOXL3-204ENST00000409549 CLSPNQ9HAW4 1339 aa18.75■□□□□ 0.59
LOXL3-204ENST00000409549 CHMP7Q8WUX9 453 aaPredicted RBP18.73■□□□□ 0.59
LOXL3-204ENST00000409549 FKBP8Q14318 412 aa18.71■□□□□ 0.59
LOXL3-204ENST00000409549 CARMIL1Q5VZK9 1371 aa18.7■□□□□ 0.58
LOXL3-204ENST00000409549 TARBP1Q13395 1621 aaKnown RBP18.7■□□□□ 0.58
LOXL3-204ENST00000409549 GAPVD1Q14C86 1478 aa18.7■□□□□ 0.58
LOXL3-204ENST00000409549 ERICH3Q5RHP9 1530 aa18.68■□□□□ 0.58
LOXL3-204ENST00000409549 EIF4G3O43432 1585 aaKnown RBP18.67■□□□□ 0.58
LOXL3-204ENST00000409549 ABCA10Q8WWZ4 1543 aa18.67■□□□□ 0.58
LOXL3-204ENST00000409549 DHX57Q6P158 1386 aaKnown RBP18.66■□□□□ 0.58
LOXL3-204ENST00000409549 ITGAEP38570 1179 aa18.64■□□□□ 0.58
LOXL3-204ENST00000409549 SNAPC4Q5SXM2 1469 aa18.63■□□□□ 0.57
LOXL3-204ENST00000409549 RBM19Q9Y4C8 960 aaKnown RBP18.61■□□□□ 0.57
LOXL3-204ENST00000409549 VPS8Q8N3P4 1428 aa18.57■□□□□ 0.56
LOXL3-204ENST00000409549 P3H3Q8IVL6 736 aa18.57■□□□□ 0.56
LOXL3-204ENST00000409549 GRIN2BQ13224 1484 aa18.56■□□□□ 0.56
LOXL3-204ENST00000409549 ARAP1Q96P48 1450 aa18.53■□□□□ 0.56
LOXL3-204ENST00000409549 WDR97A6NE52 1622 aa18.53■□□□□ 0.56
LOXL3-204ENST00000409549 DDX10Q13206 875 aaKnown RBP18.52■□□□□ 0.56
LOXL3-204ENST00000409549 KANK4Q5T7N3 995 aaPredicted RBP18.52■□□□□ 0.56
LOXL3-204ENST00000409549 TRIM52Q96A61 297 aa18.52■□□□□ 0.56
LOXL3-204ENST00000409549 OSCARQ8IYS5 282 aa18.52■□□□□ 0.55
LOXL3-204ENST00000409549 ARHGAP35Q9NRY4 1499 aa18.5■□□□□ 0.55
LOXL3-204ENST00000409549 HIRIP3Q9BW71 556 aaPredicted RBP18.48■□□□□ 0.55
LOXL3-204ENST00000409549 ABCA5Q8WWZ7 1642 aa18.48■□□□□ 0.55
LOXL3-204ENST00000409549 MSH5O43196 834 aa18.48■□□□□ 0.55
LOXL3-204ENST00000409549 PBRM1Q86U86 1689 aa18.46■□□□□ 0.55
LOXL3-204ENST00000409549 NEFLP07196 543 aa18.44■□□□□ 0.54
LOXL3-204ENST00000409549 ATP1B4Q9UN42 357 aaPredicted RBP18.42■□□□□ 0.54
LOXL3-204ENST00000409549 CUL7Q14999 1698 aa18.41■□□□□ 0.54
LOXL3-204ENST00000409549 ARID3CA6NKF2 412 aa18.4■□□□□ 0.54
LOXL3-204ENST00000409549 FHAD1B1AJZ9 1412 aa18.39■□□□□ 0.53
LOXL3-204ENST00000409549 CHD1O14646 1710 aa18.39■□□□□ 0.53
LOXL3-204ENST00000409549 SYNJ2O15056 1496 aa18.39■□□□□ 0.53
LOXL3-204ENST00000409549 MAGI1Q96QZ7 1491 aaPredicted RBP18.37■□□□□ 0.53
LOXL3-204ENST00000409549 IRX6P78412 446 aaPredicted RBP18.36■□□□□ 0.53
LOXL3-204ENST00000409549 FHOD3Q2V2M9 1422 aa18.36■□□□□ 0.53
LOXL3-204ENST00000409549 GRIN2AQ12879 1464 aa18.35■□□□□ 0.53
LOXL3-204ENST00000409549 SIN3AQ96ST3 1273 aa18.35■□□□□ 0.53
LOXL3-204ENST00000409549 ADAMTS12P58397 1594 aa18.34■□□□□ 0.53
LOXL3-204ENST00000409549 CYB5RLQ6IPT4 315 aa18.32■□□□□ 0.52
LOXL3-204ENST00000409549 PRKCSHP14314 528 aaPredicted RBP18.31■□□□□ 0.52
LOXL3-204ENST00000409549 JPH4Q96JJ6 628 aa18.31■□□□□ 0.52
LOXL3-204ENST00000409549 CTTNBP2Q8WZ74 1663 aa18.28■□□□□ 0.52
LOXL3-204ENST00000409549 ERICH6Q7L0X2 663 aa18.26■□□□□ 0.51
LOXL3-204ENST00000409549 CEP170Q5SW79 1584 aa18.26■□□□□ 0.51
LOXL3-204ENST00000409549 PPP1R15AO75807 674 aaPredicted RBP18.24■□□□□ 0.51
LOXL3-204ENST00000409549 DNAJC5Q9H3Z4 198 aa18.24■□□□□ 0.51
LOXL3-204ENST00000409549 RAB3GAP2Q9H2M9 1393 aa18.24■□□□□ 0.51
LOXL3-204ENST00000409549 CCNB3Q8WWL7 1395 aa18.22■□□□□ 0.51
LOXL3-204ENST00000409549 ANP32CO43423 234 aa18.2■□□□□ 0.5
LOXL3-204ENST00000409549 PCF11O94913 1555 aaKnown RBP18.19■□□□□ 0.5
LOXL3-204ENST00000409549 RRBP1Q9P2E9 1410 aaKnown RBP18.19■□□□□ 0.5
LOXL3-204ENST00000409549 ERCC6L2Q5T890 1561 aa18.18■□□□□ 0.5
LOXL3-204ENST00000409549 PRG4Q92954 1404 aaPredicted RBP18.18■□□□□ 0.5
LOXL3-204ENST00000409549 MAPKBP1O60336 1514 aa18.16■□□□□ 0.5
LOXL3-204ENST00000409549 CDK11AQ9UQ88 783 aaPredicted RBP18.16■□□□□ 0.5
LOXL3-204ENST00000409549 EFCAB5A4FU69 1503 aa18.16■□□□□ 0.5
LOXL3-204ENST00000409549 NUP160Q12769 1436 aa18.14■□□□□ 0.49
LOXL3-204ENST00000409549 HNRNPUQ00839 825 aaKnown RBP eCLIP18.13■□□□□ 0.49
LOXL3-204ENST00000409549 TIAM1Q13009 1591 aa18.13■□□□□ 0.49
LOXL3-204ENST00000409549 IQGAP2Q13576 1575 aa18.12■□□□□ 0.49
LOXL3-204ENST00000409549 FAM50AQ14320 339 aaKnown RBP18.12■□□□□ 0.49
LOXL3-204ENST00000409549 FANCIQ9NVI1 1328 aa18.12■□□□□ 0.49
LOXL3-204ENST00000409549 SAMD9Q5K651 1589 aa18.1■□□□□ 0.49
LOXL3-204ENST00000409549 CCER2I3L3R5 266 aa18.1■□□□□ 0.49
LOXL3-204ENST00000409549 KIAA0586Q9BVV6 1533 aa18.1■□□□□ 0.49
LOXL3-204ENST00000409549 FMN1Q68DA7 1419 aa18.1■□□□□ 0.49
LOXL3-204ENST00000409549 CASKIN1Q8WXD9 1431 aa18.09■□□□□ 0.49
LOXL3-204ENST00000409549 DEKP35659 375 aaKnown RBP18.09■□□□□ 0.49
LOXL3-204ENST00000409549 LRRC9Q6ZRR7 1453 aa18.09■□□□□ 0.49
LOXL3-204ENST00000409549 ARHGEF11O15085 1522 aa18.07■□□□□ 0.48
LOXL3-204ENST00000409549 FYCO1Q9BQS8 1478 aa18.06■□□□□ 0.48
LOXL3-204ENST00000409549 NBR1Q14596 966 aa18.06■□□□□ 0.48
LOXL3-204ENST00000409549 PHLDB1Q86UU1 1377 aa18.05■□□□□ 0.48
LOXL3-204ENST00000409549 CLASP1Q7Z460 1538 aa18.03■□□□□ 0.48
LOXL3-204ENST00000409549 SETD5Q9C0A6 1442 aa18.02■□□□□ 0.48
LOXL3-204ENST00000409549 B4GALNT3Q6L9W6 998 aa18.01■□□□□ 0.47
LOXL3-204ENST00000409549 MAP3K1Q13233 1512 aa18■□□□□ 0.47
LOXL3-204ENST00000409549 MTUS2Q5JR59 1369 aa18■□□□□ 0.47
LOXL3-204ENST00000409549 PTPRGP23470 1445 aa17.99■□□□□ 0.47
LOXL3-204ENST00000409549 DISP1Q96F81 1524 aa17.99■□□□□ 0.47
LOXL3-204ENST00000409549 RIMBP3CA6NJZ7 1639 aa17.99■□□□□ 0.47
LOXL3-204ENST00000409549 RIMBP3BA6NNM3 1639 aa17.99■□□□□ 0.47
LOXL3-204ENST00000409549 RIMBP3Q9UFD9 1639 aa17.99■□□□□ 0.47
LOXL3-204ENST00000409549 LRRIQ1Q96JM4 1722 aa17.99■□□□□ 0.47
LOXL3-204ENST00000409549 CARMIL2Q6F5E8 1435 aa17.99■□□□□ 0.47
LOXL3-204ENST00000409549 CFAP43Q8NDM7 1665 aa17.99■□□□□ 0.47
LOXL3-204ENST00000409549 UGGT2Q9NYU1 1516 aa17.98■□□□□ 0.47
LOXL3-204ENST00000409549 TRHP20396 242 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms