RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 KIAA0586Q9BVV6 1533 aa33.15■■■□□ 2.9
PDLIM2-207ENST00000409417 PRXQ9BXM0 1461 aa33.14■■■□□ 2.9
PDLIM2-207ENST00000409417 JPH4Q96JJ6 628 aa33.12■■■□□ 2.89
PDLIM2-207ENST00000409417 SHROOM2Q13796 1616 aa33.1■■■□□ 2.89
PDLIM2-207ENST00000409417 CYB5RLQ6IPT4 315 aa33.06■■■□□ 2.88
PDLIM2-207ENST00000409417 ARAP1Q96P48 1450 aa33.06■■■□□ 2.88
PDLIM2-207ENST00000409417 FAM9AQ8IZU1 332 aaPredicted RBP33.05■■■□□ 2.88
PDLIM2-207ENST00000409417 PRG4Q92954 1404 aaPredicted RBP33.02■■■□□ 2.88
PDLIM2-207ENST00000409417 ERCC6L2Q5T890 1561 aa32.99■■■□□ 2.87
PDLIM2-207ENST00000409417 IQGAP2Q13576 1575 aa32.94■■■□□ 2.86
PDLIM2-207ENST00000409417 CARMIL2Q6F5E8 1435 aa32.79■■■□□ 2.84
PDLIM2-207ENST00000409417 KIF21BO75037 1637 aa32.79■■■□□ 2.84
PDLIM2-207ENST00000409417 CTTNBP2Q8WZ74 1663 aa32.79■■■□□ 2.84
PDLIM2-207ENST00000409417 UGGT2Q9NYU1 1516 aa32.78■■■□□ 2.84
PDLIM2-207ENST00000409417 DISP1Q96F81 1524 aa32.72■■■□□ 2.83
PDLIM2-207ENST00000409417 TNIKQ9UKE5 1360 aa32.68■■■□□ 2.82
PDLIM2-207ENST00000409417 PTPRGP23470 1445 aa32.66■■■□□ 2.82
PDLIM2-207ENST00000409417 GOLGA3Q08378 1498 aa32.63■■■□□ 2.81
PDLIM2-207ENST00000409417 KIAA0556O60303 1618 aa32.6■■■□□ 2.81
PDLIM2-207ENST00000409417 EHMT2Q96KQ7 1210 aa32.6■■■□□ 2.81
PDLIM2-207ENST00000409417 UBTFP17480 764 aaKnown RBP32.59■■■□□ 2.81
PDLIM2-207ENST00000409417 TTBK1Q5TCY1 1321 aaPredicted RBP32.56■■■□□ 2.8
PDLIM2-207ENST00000409417 RANGAP1P46060 587 aaPredicted RBP32.45■■■□□ 2.79
PDLIM2-207ENST00000409417 ADCY10Q96PN6 1610 aa32.45■■■□□ 2.78
PDLIM2-207ENST00000409417 SAMD9Q5K651 1589 aa32.43■■■□□ 2.78
PDLIM2-207ENST00000409417 P3H3Q8IVL6 736 aa32.43■■■□□ 2.78
PDLIM2-207ENST00000409417 UACAQ9BZF9 1416 aa32.43■■■□□ 2.78
PDLIM2-207ENST00000409417 NPM1P06748 294 aaKnown RBP eCLIP32.42■■■□□ 2.78
PDLIM2-207ENST00000409417 UHRF1BP1LA0JNW5 1464 aa32.39■■■□□ 2.78
PDLIM2-207ENST00000409417 EFCAB5A4FU69 1503 aa32.34■■■□□ 2.77
PDLIM2-207ENST00000409417 ABCC2Q92887 1545 aa32.34■■■□□ 2.77
PDLIM2-207ENST00000409417 TRHP20396 242 aaPredicted RBP32.33■■■□□ 2.77
PDLIM2-207ENST00000409417 PLB1Q6P1J6 1458 aa32.32■■■□□ 2.76
PDLIM2-207ENST00000409417 FHOD3Q2V2M9 1422 aa32.28■■■□□ 2.76
PDLIM2-207ENST00000409417 ABCA8O94911 1581 aa32.26■■■□□ 2.75
PDLIM2-207ENST00000409417 MAPKBP1O60336 1514 aa32.25■■■□□ 2.75
PDLIM2-207ENST00000409417 KDM5BQ9UGL1 1544 aa32.23■■■□□ 2.75
PDLIM2-207ENST00000409417 ARHGAP35Q9NRY4 1499 aa32.21■■■□□ 2.75
PDLIM2-207ENST00000409417 ASXL2Q76L83 1435 aa32.12■■■□□ 2.73
PDLIM2-207ENST00000409417 ABCC10Q5T3U5 1492 aa32.11■■■□□ 2.73
PDLIM2-207ENST00000409417 ZCCHC11Q5TAX3 1644 aaKnown RBP32.1■■■□□ 2.73
PDLIM2-207ENST00000409417 LOC105371045A0A1W2PR82 267 aa32.1■■■□□ 2.73
PDLIM2-207ENST00000409417 RAPGEF6Q8TEU7 1601 aa32.09■■■□□ 2.73
PDLIM2-207ENST00000409417 CLIP1P30622 1438 aa32.08■■■□□ 2.73
PDLIM2-207ENST00000409417 FMN1Q68DA7 1419 aa32.07■■■□□ 2.72
PDLIM2-207ENST00000409417 FAM69CQ0P6D2 419 aa32.05■■■□□ 2.72
PDLIM2-207ENST00000409417 ATP10BO94823 1461 aa32.03■■■□□ 2.72
PDLIM2-207ENST00000409417 ARID3CA6NKF2 412 aa32.03■■■□□ 2.72
PDLIM2-207ENST00000409417 NUP153P49790 1475 aaKnown RBP32.03■■■□□ 2.72
PDLIM2-207ENST00000409417 DIP2BQ9P265 1576 aa32■■■□□ 2.71
PDLIM2-207ENST00000409417 KIF13AQ9H1H9 1805 aa31.98■■■□□ 2.71
PDLIM2-207ENST00000409417 WDR7Q9Y4E6 1490 aa31.97■■■□□ 2.71
PDLIM2-207ENST00000409417 CEP162Q5TB80 1403 aa31.96■■■□□ 2.71
PDLIM2-207ENST00000409417 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.92■■■□□ 2.7
PDLIM2-207ENST00000409417 HNRNPUL2Q1KMD3 747 aaKnown RBP31.92■■■□□ 2.7
PDLIM2-207ENST00000409417 EPRSP07814 1512 aaKnown RBP31.91■■■□□ 2.7
PDLIM2-207ENST00000409417 GLI2P10070 1586 aa31.88■■■□□ 2.69
PDLIM2-207ENST00000409417 ATP1B4Q9UN42 357 aaPredicted RBP31.87■■■□□ 2.69
PDLIM2-207ENST00000409417 KCNH8Q96L42 1107 aa31.85■■■□□ 2.69
PDLIM2-207ENST00000409417 HECW1Q76N89 1606 aa31.84■■■□□ 2.69
PDLIM2-207ENST00000409417 CASKIN1Q8WXD9 1431 aa31.83■■■□□ 2.69
PDLIM2-207ENST00000409417 PLEKHD1A6NEE1 506 aa31.8■■■□□ 2.68
PDLIM2-207ENST00000409417 CDK13Q14004 1512 aaKnown RBP31.78■■■□□ 2.68
PDLIM2-207ENST00000409417 PCF11O94913 1555 aaKnown RBP31.76■■■□□ 2.67
PDLIM2-207ENST00000409417 FYCO1Q9BQS8 1478 aa31.75■■■□□ 2.67
PDLIM2-207ENST00000409417 MAP3K4Q9Y6R4 1608 aa31.71■■■□□ 2.67
PDLIM2-207ENST00000409417 CDK11AQ9UQ88 783 aaPredicted RBP31.71■■■□□ 2.67
PDLIM2-207ENST00000409417 TSPOAP1O95153 1857 aa31.68■■■□□ 2.66
PDLIM2-207ENST00000409417 CCDC18Q5T9S5 1454 aa31.67■■■□□ 2.66
PDLIM2-207ENST00000409417 CD109Q6YHK3 1445 aa31.67■■■□□ 2.66
PDLIM2-207ENST00000409417 CFAP43Q8NDM7 1665 aa31.63■■■□□ 2.65
PDLIM2-207ENST00000409417 LRRIQ1Q96JM4 1722 aa31.63■■■□□ 2.65
PDLIM2-207ENST00000409417 PPRC1Q5VV67 1664 aaKnown RBP31.62■■■□□ 2.65
PDLIM2-207ENST00000409417 TEX14Q8IWB6 1497 aa31.61■■■□□ 2.65
PDLIM2-207ENST00000409417 ABCA9Q8IUA7 1624 aa31.61■■■□□ 2.65
PDLIM2-207ENST00000409417 MAGI3Q5TCQ9 1506 aa31.6■■■□□ 2.65
PDLIM2-207ENST00000409417 TROQ12816 1431 aaPredicted RBP31.57■■■□□ 2.64
PDLIM2-207ENST00000409417 VPS8Q8N3P4 1428 aa31.57■■■□□ 2.64
PDLIM2-207ENST00000409417 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.52■■■□□ 2.64
PDLIM2-207ENST00000409417 TTC37Q6PGP7 1564 aa31.45■■■□□ 2.63
PDLIM2-207ENST00000409417 KDM6BO15054 1643 aa31.45■■■□□ 2.63
PDLIM2-207ENST00000409417 KIF14Q15058 1648 aa31.44■■■□□ 2.62
PDLIM2-207ENST00000409417 PHLDB1Q86UU1 1377 aa31.41■■■□□ 2.62
PDLIM2-207ENST00000409417 COL17A1Q9UMD9 1497 aaPredicted RBP31.4■■■□□ 2.62
PDLIM2-207ENST00000409417 NEO1Q92859 1461 aa31.39■■■□□ 2.62
PDLIM2-207ENST00000409417 MTUS2Q5JR59 1369 aa31.39■■■□□ 2.62
PDLIM2-207ENST00000409417 PLCH2O75038 1416 aa31.38■■■□□ 2.61
PDLIM2-207ENST00000409417 FANCAO15360 1455 aa31.33■■■□□ 2.61
PDLIM2-207ENST00000409417 ARAP3Q8WWN8 1544 aa31.33■■■□□ 2.61
PDLIM2-207ENST00000409417 TIAM1Q13009 1591 aa31.31■■■□□ 2.6
PDLIM2-207ENST00000409417 MAP3K1Q13233 1512 aa31.29■■■□□ 2.6
PDLIM2-207ENST00000409417 EFCAB2Q5VUJ9 269 aa31.28■■■□□ 2.6
PDLIM2-207ENST00000409417 EHBP1L1Q8N3D4 1523 aa31.28■■■□□ 2.6
PDLIM2-207ENST00000409417 AKNAQ7Z591 1439 aa31.28■■■□□ 2.6
PDLIM2-207ENST00000409417 MYO5CQ9NQX4 1742 aa31.27■■■□□ 2.6
PDLIM2-207ENST00000409417 CFAP74Q9C0B2 1584 aa31.25■■■□□ 2.59
PDLIM2-207ENST00000409417 APLP2Q06481 763 aa31.23■■■□□ 2.59
PDLIM2-207ENST00000409417 ARHGAP5Q13017 1502 aa31.21■■■□□ 2.59
PDLIM2-207ENST00000409417 LRRC9Q6ZRR7 1453 aa31.2■■■□□ 2.59
PDLIM2-207ENST00000409417 RAPGEF3O95398 923 aa31.2■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms